Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.0e-169 599.0 292 100.0
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 5.8e-161 570.9 292 94.9
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 5.8e-161 570.9 292 95.2
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.4e-159 565.5 292 95.5
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 9.3e-159 563.5 292 93.8
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 1.3e-152 543.1 292 89.4
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 4.6e-150 534.6 291 87.6
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 3.9e-149 531.6 292 87.0
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 3.9e-149 531.6 292 87.3
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 8.7e-149 530.4 292 86.6
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 8.7e-149 530.4 292 87.0
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 2.5e-148 528.9 292 86.0
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 3.3e-148 528.5 292 86.0
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 4.3e-148 528.1 292 85.3
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 5.6e-148 527.7 292 86.6
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.4e-148 527.3 292 85.6
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 7.4e-148 527.3 292 85.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 9.6e-148 526.9 289 86.5
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 9.6e-148 526.9 290 85.9
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.3e-147 526.6 292 85.6
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.1e-146 523.5 292 84.2
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.4e-146 523.1 292 84.9
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.4e-146 523.1 292 85.3
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.8e-146 522.7 292 84.9
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.8e-146 522.7 292 85.3
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 2.4e-146 522.3 292 85.3
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 3.1e-146 521.9 292 86.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 3.1e-146 521.9 290 84.1
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 4.0e-146 521.5 292 84.2
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 6.9e-146 520.8 288 85.1
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 9.0e-146 520.4 292 84.2
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 9.0e-146 520.4 294 85.7
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.2e-145 520.0 292 84.6
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 2.6e-145 518.8 290 84.5
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 3.4e-145 518.5 292 84.2
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 3.4e-145 518.5 288 84.4
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 5.8e-145 517.7 280 87.5
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 5.8e-145 517.7 292 84.2
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 5.8e-145 517.7 290 83.8
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 5.8e-145 517.7 292 83.6
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 7.6e-145 517.3 292 84.6
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 83.9
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.3e-144 516.5 292 83.9
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.3e-144 516.5 292 83.9
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 2.2e-144 515.8 288 83.3
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 3.8e-144 515.0 292 83.6
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 4.9e-144 514.6 292 84.2
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 4.9e-144 514.6 292 83.2
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.1e-143 513.5 288 83.7
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.4e-143 513.1 292 82.9
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.4e-143 513.1 290 83.1
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.9e-143 512.7 288 83.3
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 3.2e-143 511.9 290 84.5
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 7.1e-143 510.8 290 82.8
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 7.1e-143 510.8 288 83.0
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 7.1e-143 510.8 286 86.0
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 1.6e-142 509.6 292 82.9
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 2.1e-142 509.2 285 84.6
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 2.1e-142 509.2 285 84.6
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 6.0e-142 507.7 289 84.1
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 6.0e-142 507.7 292 82.9
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 7.9e-142 507.3 288 81.6
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.0e-141 506.9 288 82.3
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.3e-141 506.5 290 84.1
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.3e-141 506.5 292 82.9
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 3.0e-141 505.4 290 83.1
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 82.2
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 82.2
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 82.2
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 8.7e-141 503.8 289 82.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.1e-140 503.4 321 76.0
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.5e-140 503.1 292 81.8
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 3.3e-140 501.9 292 81.5
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.3e-140 501.5 292 82.5
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 5.6e-140 501.1 292 81.2
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 2.1e-139 499.2 292 80.8
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 3.7e-139 498.4 292 80.5
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.4e-138 496.5 292 81.8
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 3.1e-138 495.4 290 80.7
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 9.0e-138 493.8 285 83.9
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 2.0e-137 492.7 292 79.5
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 2.6e-137 492.3 292 79.5
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 3.4e-137 491.9 292 79.5
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 5.8e-137 491.1 292 79.8
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 7.6e-137 490.7 290 78.6
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.3e-136 490.0 285 80.0
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 2.9e-136 488.8 272 85.7
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 4.9e-136 488.0 293 79.2
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.1e-135 486.9 290 79.3
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 1.1e-135 486.9 291 78.0
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.7e-134 482.3 274 83.6
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 3.5e-134 481.9 292 77.1
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 3.5e-134 481.9 292 77.1
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 6.0e-134 481.1 292 77.1
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 6.0e-134 481.1 292 77.1
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 3.9e-133 478.4 285 78.2
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 3.9e-133 478.4 274 83.9
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 8.7e-133 477.2 289 77.5
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 8.7e-133 477.2 288 79.9
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.1e-132 476.9 289 77.9
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 3.3e-132 475.3 292 79.1
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 5.7e-132 474.6 289 78.9
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 2.8e-131 472.2 272 83.1
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 3.7e-131 471.9 292 78.8
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 1.1e-130 470.3 255 87.5
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.8e-130 469.5 313 74.8
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 4.1e-130 468.4 273 82.4
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 5.0e-128 461.5 294 74.1
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.2e-126 456.8 292 77.4
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 8.2e-123 444.1 308 71.4
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 9.0e-122 440.7 287 72.1
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.0e-120 437.2 288 72.2
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.0e-117 427.2 271 76.4
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.8e-117 426.4 282 69.9
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 4.1e-114 415.2 268 72.4
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.5e-113 413.3 276 69.9
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 2.8e-107 392.5 282 64.2
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.8e-106 389.8 223 83.4
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 1.2e-97 360.5 186 94.1
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.7e-97 359.4 321 60.4
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 2.6e-92 342.8 190 85.8
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.0e-85 319.3 179 86.0
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 2.8e-83 312.8 286 52.1
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.2e-81 307.4 297 53.9
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.2e-81 307.4 295 53.6
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 4.3e-79 298.9 188 75.5
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 5.6e-79 298.5 173 82.1
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.3e-72 277.3 290 47.6
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.4e-60 235.7 308 45.5
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 6.0e-57 225.3 164 67.7
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.2e-53 212.2 224 53.6
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.2e-51 206.8 221 53.4
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 2.1e-46 190.3 106 83.0
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.6e-44 181.8 101 86.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.3e-43 181.0 102 84.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.8e-41 171.8 97 84.5
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 4.0e-29 132.9 76 84.2
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.5e-23 113.6 166 41.6
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.8e-22 109.4 97 60.8
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.8e-08 64.3 51 60.8
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 6.7e-08 62.4 40 77.5


User provided reference genes

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