Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.9e-194 681.8 357 100.0
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.1e-150 537.0 362 77.9
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.3e-149 533.5 359 78.3
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 4.6e-144 515.0 351 79.2
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.8e-143 513.1 362 77.1
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.0e-127 460.7 315 77.5
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.2e-123 447.2 318 74.8
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 3.8e-122 442.2 284 81.0
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.6e-110 402.9 272 78.7
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 4.2e-97 359.0 198 94.4
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 5.5e-97 358.6 362 55.8
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.6e-94 349.7 209 85.6
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 3.1e-92 342.8 363 55.6
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 5.4e-92 342.0 366 53.8
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 5.0e-90 335.5 356 52.8
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 9.5e-89 331.3 363 50.7
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 1.4e-84 317.4 360 50.6
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 3.1e-84 316.2 356 52.8
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 5.4e-84 315.5 366 50.3
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 9.2e-84 314.7 359 50.4
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 9.2e-84 314.7 365 50.7
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 2.0e-83 313.5 360 50.0
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.3e-82 310.8 362 49.7
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 2.3e-82 310.1 214 78.0
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 1.1e-81 307.8 408 46.3
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.5e-81 307.4 356 48.9
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 7.3e-81 305.1 364 47.8
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 2.1e-80 303.5 364 49.2
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 4.7e-80 302.4 362 47.5
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 8.0e-80 301.6 362 47.8
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 8.0e-80 301.6 357 49.6
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 1.4e-79 300.8 361 48.2
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.4e-78 296.2 351 47.6
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 4.4e-78 295.8 352 46.9
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 4.9e-77 292.4 355 48.7
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 6.4e-77 292.0 351 47.3
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 8.3e-77 291.6 363 47.1
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 3.2e-76 289.7 351 47.3
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 3.0e-74 283.1 354 45.5
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 5.0e-74 282.3 357 45.9
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 6.6e-74 282.0 363 47.1
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.5e-73 280.8 356 47.5
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 2.5e-73 280.0 349 46.7
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 4.3e-73 279.3 356 46.9
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 4.7e-72 275.8 348 49.1
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 6.2e-72 275.4 356 46.6
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 8.0e-72 275.0 366 44.3
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 1.0e-71 274.6 348 46.8
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 1.4e-71 274.2 465 39.8
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.8e-71 273.9 170 84.7
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 8.9e-71 271.6 347 47.0
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 1.2e-70 271.2 351 45.9
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 7.5e-70 268.5 377 44.8
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 2.9e-69 266.5 348 44.3
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 3.7e-69 266.2 356 44.7
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 8.3e-69 265.0 326 47.5
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 1.4e-68 264.2 333 48.0
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 3.2e-68 263.1 351 44.7
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 4.6e-67 259.2 365 43.0
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 2.3e-66 256.9 347 45.2
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 6.6e-66 255.4 356 45.2
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 8.6e-66 255.0 350 42.9
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.1e-65 254.6 394 42.6
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.9e-65 253.8 345 44.6
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 2.1e-64 250.4 352 43.2
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 2.8e-64 250.0 351 44.7
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 6.2e-64 248.8 373 41.8
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 2.3e-63 246.9 353 40.8
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 3.1e-63 246.5 353 43.3
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 5.8e-62 242.3 351 40.5
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 7.5e-62 241.9 361 42.9
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 9.9e-62 241.5 354 42.7
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.7e-61 240.7 351 40.2
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 2.2e-61 240.4 354 42.4
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 2.9e-61 240.0 361 42.1
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 3.7e-61 239.6 351 41.6
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 3.7e-61 239.6 354 41.8
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 3.7e-61 239.6 351 41.3
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 3.7e-61 239.6 365 43.0
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 1.1e-60 238.0 359 42.9
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 2.4e-60 236.9 351 41.0
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 3.2e-60 236.5 352 40.1
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 3.2e-60 236.5 352 40.6
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 4.1e-60 236.1 363 41.3
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 7.1e-60 235.3 348 39.4
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 1.6e-59 234.2 169 75.7
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 2.7e-59 233.4 353 41.1
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 7.8e-59 231.9 350 40.9
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 7.8e-59 231.9 355 41.1
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 2.3e-58 230.3 350 41.4
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 3.0e-58 229.9 351 38.7
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 6.6e-58 228.8 345 40.0
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 1.5e-57 227.6 346 43.9
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 1.5e-57 227.6 354 40.1
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 3.3e-57 226.5 351 40.2
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 3.6e-56 223.0 389 38.6
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 4.7e-56 222.6 341 41.1
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 1.4e-55 221.1 363 41.3
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 4.9e-53 212.6 263 44.5
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 6.4e-53 212.2 206 55.8
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 9.2e-52 208.4 357 41.2
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 3.5e-51 206.5 340 40.9
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 6.0e-51 205.7 357 38.1
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 3.0e-50 203.4 351 39.6
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.2e-48 198.0 127 79.5
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 4.7e-48 196.1 307 40.7
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 1.8e-47 194.1 312 40.1
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.2e-46 191.4 273 41.0
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.5e-46 191.0 286 40.6
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 2.0e-46 190.7 314 38.5
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 2.6e-46 190.3 377 35.5
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 1.9e-44 184.1 362 36.5
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 7.8e-43 178.7 373 35.1
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 9.6e-41 171.8 351 35.3
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 2.1e-40 170.6 316 39.9
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 6.2e-40 169.1 201 46.8
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 1.2e-35 154.8 282 38.7
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 2.1e-35 154.1 251 35.9
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 2.3e-34 150.6 309 34.0
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 7.4e-33 145.6 216 44.0
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 2.2e-29 134.0 264 37.9
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 2.2e-29 134.0 264 37.9
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 2.2e-29 134.0 264 37.9
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 1.9e-28 131.0 228 39.0
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 2.4e-28 130.6 165 44.2
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 6.0e-27 125.9 245 38.4
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 2.1e-24 117.5 104 65.4
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 1.3e-18 98.2 405 28.1
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 1.8e-18 97.8 99 51.5
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 8.7e-18 95.5 404 27.2
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 9.0e-15 85.5 97 49.5
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.0e-14 84.3 62 77.4
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 7.9e-11 72.4 66 56.1
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 3.0e-10 70.5 66 54.5
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 6.7e-10 69.3 225 24.9
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 1.5e-09 68.2 236 25.4
SEGI_30577 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 2.2e-08 64.3 104 39.4
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 4.8e-08 63.2 370 23.5
Ah.13g066730 Amaranthus hybridus HOM05D014553 ORTHO05D018255 6.3e-08 62.8 48 66.7
BcaB04g18591 Brassica carinata HOM05D000144 ORTHO05D006884 5.3e-07 59.7 209 27.8
Sabra18G0125400 Salix brachista HOM05D000311 ORTHO05D000183 1.5e-06 58.2 42 69.0
Sabra18G0129100 Salix brachista HOM05D000311 ORTHO05D000183 5.9e-06 56.2 42 66.7


User provided reference genes

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