Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 9.2e-150 533.5 261 100.0
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 4.8e-114 414.8 258 81.8
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 9.3e-110 400.6 310 69.7
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 6.6e-108 394.4 268 74.6
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 2.1e-106 389.4 258 75.2
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 9.9e-104 380.6 297 67.0
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 2.2e-103 379.4 258 74.0
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 2.2e-103 379.4 258 72.9
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 8.4e-103 377.5 258 74.0
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 2.4e-102 375.9 258 73.6
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 4.2e-102 375.2 258 73.3
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 1.2e-101 373.6 258 72.5
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 1.2e-101 373.6 258 72.9
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 2.7e-101 372.5 258 71.7
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 2.3e-100 369.4 258 71.7
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 3.0e-100 369.0 261 72.4
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 8.7e-100 367.5 258 70.5
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 8.7e-100 367.5 257 72.0
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.1e-99 367.1 268 69.8
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 2.5e-99 365.9 264 68.9
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 4.3e-99 365.2 258 71.3
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 2.1e-98 362.8 258 70.9
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 2.8e-98 362.5 258 70.9
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 2.8e-98 362.5 257 70.0
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 3.7e-98 362.1 257 69.6
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 8.1e-98 360.9 258 70.9
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 1.1e-97 360.5 258 70.5
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 1.1e-97 360.5 257 70.4
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 1.4e-97 360.1 257 71.6
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 1.4e-97 360.1 259 71.0
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 2.4e-97 359.4 259 71.4
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 3.1e-97 359.0 258 70.5
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 4.0e-97 358.6 259 71.0
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 6.9e-97 357.8 258 68.6
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 1.2e-96 357.1 259 71.0
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 1.2e-96 357.1 258 69.0
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 2.6e-96 355.9 259 69.9
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 3.4e-96 355.5 259 70.3
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 1.3e-95 353.6 261 68.2
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 1.3e-95 353.6 259 70.3
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 2.9e-95 352.4 259 69.9
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 8.4e-95 350.9 258 70.2
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 1.9e-94 349.7 259 69.9
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 2.5e-94 349.4 257 68.5
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 3.2e-94 349.0 258 69.0
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 7.9e-93 344.4 281 63.7
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 1.3e-92 343.6 257 67.7
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 3.0e-92 342.4 258 69.4
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 4.3e-91 338.6 257 66.1
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 9.6e-91 337.4 359 53.5
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 1.6e-90 336.7 258 65.1
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 4.8e-90 335.1 257 65.0
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 8.2e-90 334.3 258 67.4
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 1.4e-89 333.6 257 65.4
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 8.4e-87 324.3 238 68.1
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 3.9e-84 315.5 258 64.3
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 2.5e-83 312.8 259 63.7
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.4e-81 306.2 225 68.4
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 1.0e-79 300.8 223 70.4
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 1.9e-78 296.6 219 69.9
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 2.1e-77 293.1 222 68.5
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 5.1e-76 288.5 235 65.5
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 5.1e-76 288.5 222 66.7
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 1.5e-75 287.0 262 60.7
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 3.7e-74 282.3 257 58.8
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 2.1e-69 266.5 259 52.9
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 4.7e-69 265.4 260 52.3
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 3.3e-67 259.2 159 79.9
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 8.2e-66 254.6 259 51.4
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 7.7e-64 248.1 257 51.8
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 3.5e-56 222.6 179 64.2
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.8e-55 219.2 118 88.1
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.8e-55 219.2 118 88.1
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.6e-53 212.6 258 48.4
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 1.1e-49 201.1 121 80.2
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.1e-49 199.1 282 44.3
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.1e-49 199.1 282 44.3
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 7.5e-43 178.3 258 43.8
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 5.9e-40 168.7 144 63.2
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 6.1e-37 158.7 177 47.5
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 7.5e-35 151.8 308 35.7
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 1.1e-33 147.9 86 82.6
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 1.4e-33 147.5 86 80.2
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 1.4e-33 147.5 86 80.2
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 1.5e-30 137.5 258 35.3
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 1.9e-30 137.1 81 82.7
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 9.5e-30 134.8 81 81.5
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 7.5e-27 125.2 74 81.1
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 9.8e-27 124.8 76 77.6
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 1.6e-24 117.5 76 72.4
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 6.6e-23 112.1 68 76.5
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.9e-22 110.5 62 82.3
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 3.3e-22 109.8 53 98.1
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 2.8e-21 106.7 71 70.4
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 4.0e-20 102.8 53 92.5
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 7.5e-19 98.6 53 88.7
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.4e-17 94.4 53 83.0
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.4e-17 94.4 53 83.0
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 5.4e-17 92.4 293 29.7
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 2.8e-13 80.1 41 92.7
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 1.1e-09 68.2 165 32.7
CSS0038194 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 9.6e-06 55.1 38 68.4


User provided reference genes

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