Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014640g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.9e-146 521.5 282 100.0
Nitab4.5_0002459g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.8e-96 355.1 280 71.1
Nitab4.5_0003033g0070 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.8e-95 353.2 280 70.4
Nitab4.5_0008354g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 9.1e-95 350.9 280 70.7
Nitab4.5_0005900g0130 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.6e-94 350.1 278 71.6
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.5e-94 349.0 279 70.6
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.5e-94 349.0 280 70.4
Nitab4.5_0004436g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 7.7e-94 347.8 280 71.4
Nitab4.5_0008885g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 8.0e-91 337.8 299 71.2
Nitab4.5_0002497g0050 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.4e-89 332.0 288 69.4
Nitab4.5_0005249g0080 Nicotiana tabacum HOM05D005877 ORTHO05D011670 5.0e-85 318.5 268 67.5
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.6e-83 313.5 268 65.7
Nitab4.5_0019772g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.6e-83 312.4 256 71.1
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.4e-79 298.5 280 61.8
Nitab4.5_0000884g0110 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.7e-75 285.4 280 61.1
Nitab4.5_0000471g0160 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.8e-71 273.5 226 73.5
Nitab4.5_0004712g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.2e-71 272.7 251 64.5
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.2e-70 270.8 280 58.2
Nitab4.5_0003581g0050 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.5e-68 263.1 245 63.7
Nitab4.5_0000566g0030 Nicotiana tabacum HOM05D005877 ORTHO05D000482 9.5e-68 261.2 200 73.0
Nitab4.5_0008927g0010 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.1e-66 256.1 264 59.5
Nitab4.5_0006720g0050 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.2e-65 254.2 264 60.2
Nitab4.5_0005924g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.4e-65 252.7 262 59.9
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.8e-65 251.1 268 59.0
Nitab4.5_0002694g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.6e-62 243.8 226 65.0
Nitab4.5_0001165g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.9e-60 236.9 287 51.9
Nitab4.5_0005376g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.7e-56 223.8 278 52.2
Nitab4.5_0007565g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.9e-56 223.0 216 61.1
Nitab4.5_0010812g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.6e-54 215.7 252 57.1
Nitab4.5_0007251g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.4e-50 204.1 216 59.3
Nitab4.5_0007005g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.0e-49 200.3 176 69.3
Nitab4.5_0018926g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.3e-48 197.6 309 47.2
Nitab4.5_0005271g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.7e-48 196.1 220 56.4
Nitab4.5_0010096g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.1e-47 191.8 169 65.1
Nitab4.5_0012573g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 4.6e-46 189.1 238 52.1
Nitab4.5_0007035g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.1e-45 185.7 184 62.0
Nitab4.5_0007689g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 8.6e-45 184.9 262 46.9
Nitab4.5_0002282g0080 Nicotiana tabacum HOM05D005877 ORTHO05D000482 8.9e-42 174.9 138 71.7
Nitab4.5_0011007g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.2e-41 174.5 246 54.9
Nitab4.5_0000688g0200 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.7e-40 170.6 205 57.6
Nitab4.5_0001947g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.1e-39 167.9 175 57.7
Nitab4.5_0003674g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-37 161.4 127 70.1
Nitab4.5_0006936g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.3e-37 161.0 218 52.3
Nitab4.5_0006716g0010 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.7e-37 160.6 164 62.2
Nitab4.5_0005062g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 8.1e-35 151.8 102 80.4
Nitab4.5_0007906g0060 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.1e-34 151.4 101 79.2
Nitab4.5_0025549g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.8e-34 150.6 99 78.8
Nitab4.5_0005336g0040 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.5e-33 147.5 144 62.5
Nitab4.5_0004295g0030 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.6e-33 146.7 255 41.2
Nitab4.5_0006716g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.4e-33 146.4 115 75.7
Nitab4.5_0022061g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.3e-32 144.4 119 69.7
Nitab4.5_0003240g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.1e-31 141.4 137 65.7
Nitab4.5_0010096g0070 Nicotiana tabacum HOM05D005877 ORTHO05D011670 2.1e-30 137.1 87 82.8
Nitab4.5_0002541g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.1e-29 132.5 123 66.7
Nitab4.5_0002650g0120 Nicotiana tabacum HOM05D005877 ORTHO05D000482 9.6e-28 128.3 116 63.8
Nitab4.5_0001684g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.1e-27 125.2 163 50.9
Nitab4.5_0003233g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 5.3e-26 122.5 106 65.1
Nitab4.5_0001029g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.2e-25 121.3 137 55.5
Nitab4.5_0004656g0050 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.3e-24 117.9 102 66.7
Nitab4.5_0003373g0090 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.8e-24 116.3 100 76.0
Nitab4.5_0005263g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.9e-23 114.0 161 55.3
Nitab4.5_0009099g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.2e-23 113.2 104 62.5
Nitab4.5_0018108g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.0e-22 109.0 171 45.6
Nitab4.5_0004656g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.9e-22 108.6 100 64.0
Nitab4.5_0001329g0160 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-21 108.2 59 88.1
Nitab4.5_0002804g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.0e-21 108.2 69 79.7
Nitab4.5_0002804g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.9e-21 106.3 97 67.0
Nitab4.5_0004824g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.7e-21 105.1 95 66.3
Nitab4.5_0022061g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.3e-20 103.2 59 83.1
Nitab4.5_0000195g0120 Nicotiana tabacum HOM05D005877 ORTHO05D011670 2.6e-17 93.6 63 71.4
Nitab4.5_0000138g0210 Nicotiana tabacum HOM05D005877 ORTHO05D011670 5.8e-17 92.4 57 80.7
Nitab4.5_0004824g0070 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.0e-16 91.7 64 75.0
Nitab4.5_0004850g0040 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.4e-15 87.8 157 42.0
Nitab4.5_0005263g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.2e-15 86.7 64 76.6
Nitab4.5_0000860g0120 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.5e-12 77.0 80 58.8
Nitab4.5_0005062g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.6e-11 74.3 56 75.0
Nitab4.5_0001899g0140 Nicotiana tabacum HOM05D005877 ORTHO05D011670 2.8e-11 73.6 55 69.1
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.1e-10 70.1 53 60.4
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.9e-10 68.9 72 47.2
Nitab4.5_0000759g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.0e-10 68.6 45 71.1
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 1.2e-09 68.2 84 40.5
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-09 68.2 53 58.5
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-09 67.8 53 58.5
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-09 67.0 53 56.6
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.4e-09 66.6 53 56.6
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.4e-09 66.6 75 53.3
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 3.4e-09 66.6 84 40.5
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 3.4e-09 66.6 84 40.5
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 3.4e-09 66.6 84 40.5
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.5e-09 66.2 53 56.6
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.5e-09 66.2 53 56.6
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.5e-09 66.2 150 35.3
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.5e-09 66.2 53 56.6
Nitab4.5_0000586g0100 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.9e-09 65.9 44 70.5
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.9e-09 65.9 53 56.6
Nitab4.5_0000471g0170 Nicotiana tabacum HOM05D005877 ORTHO05D283639 7.6e-09 65.5 42 76.2
Nitab4.5_0000912g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.6e-09 65.5 56 58.9
Nitab4.5_0000502g0200 Nicotiana tabacum HOM05D005877 ORTHO05D282344 1.0e-08 65.1 65 56.9
Nitab4.5_0001708g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.0e-08 65.1 45 71.1
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-08 64.7 52 55.8
Nitab4.5_0000228g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-08 64.3 52 57.7
Nitab4.5_0000699g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.2e-08 63.9 162 34.6
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-08 63.5 53 54.7
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-08 63.5 74 47.3
Nitab4.5_0001047g0110 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.8e-08 63.2 53 52.8
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.8e-08 63.2 44 68.2
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.8e-08 63.2 136 33.8
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.5e-08 62.4 84 41.7
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.5e-08 62.4 53 52.8
Nitab4.5_0003117g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 8.4e-08 62.0 161 30.4
Nitab4.5_0010116g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.9e-07 60.8 67 46.3
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.5e-07 60.5 52 53.8
Nitab4.5_0000073g0470 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.2e-07 60.1 191 29.3
Nitab4.5_0000514g0210 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.2e-07 60.1 45 66.7
Nitab4.5_0002002g0120 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.2e-07 60.1 140 35.7
Nitab4.5_0003525g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.2e-07 59.7 49 51.0
Nitab4.5_0000742g0140 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.5e-07 59.3 121 35.5
Nitab4.5_0001464g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.5e-07 59.3 45 64.4
Nitab4.5_0004809g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.5e-07 59.3 50 56.0
Nitab4.5_0006450g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.3e-07 58.5 47 57.4
Nitab4.5_0000422g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-06 58.2 46 58.7
Nitab4.5_0000617g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-06 58.2 46 60.9
Nitab4.5_0008388g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-06 58.2 45 64.4
Nitab4.5_0000320g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-06 57.8 57 47.4
Nitab4.5_0001024g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-06 57.8 42 59.5
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 1.6e-06 57.8 54 46.3
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.1e-06 57.4 160 28.8
Nitab4.5_0001730g0140 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-06 57.0 49 53.1
Nitab4.5_0003869g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-06 57.0 129 31.8
Nitab4.5_0009415g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-06 57.0 48 52.1
Nitab4.5_0009593g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-06 57.0 48 52.1
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 2.7e-06 57.0 57 47.4
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.5e-06 56.6 45 60.0
Nitab4.5_0003022g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.5e-06 56.6 27 92.6
Nitab4.5_0009940g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-06 56.2 42 57.1
Nitab4.5_0014929g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.6e-06 56.2 79 39.2
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 6.1e-06 55.8 49 49.0
Nitab4.5_0000437g0080 Nicotiana tabacum HOM05D006812 ORTHO05D000482 6.1e-06 55.8 45 57.8
Nitab4.5_0000647g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.1e-06 55.8 48 50.0
Nitab4.5_0000316g0320 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.9e-06 55.5 49 51.0
Nitab4.5_0004979g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.9e-06 55.5 83 36.1
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 7.9e-06 55.5 54 44.4
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 7.9e-06 55.5 54 44.4


User provided reference genes

Program Settings