Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 2.9e-284 981.5 604 100.0
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 4.3e-259 897.9 604 90.6
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 4.0e-132 476.1 572 63.1
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 4.6e-120 436.0 598 59.4
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 4.3e-110 402.9 598 56.4
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 4.2e-105 386.3 598 54.8
Peaxi162Scf01290g00019 Petunia axillaris HOM05D007736 ORTHO05D009783 4.1e-100 369.8 496 62.9
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 3.7e-61 240.4 545 34.9
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 1.3e-53 215.3 322 42.2
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.7e-53 214.9 305 44.9
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 5.4e-52 209.9 355 41.4
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 4.5e-51 206.8 343 39.9
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 2.3e-50 204.5 287 43.6
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 2.3e-47 194.5 354 36.4
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 4.4e-46 190.3 284 40.1
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 9.8e-46 189.1 277 43.0
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 2.7e-43 181.0 274 40.9
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 3.0e-42 177.6 252 42.1
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 8.6e-42 176.0 282 39.4
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 1.5e-41 175.3 325 35.7
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 2.5e-41 174.5 282 38.7
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 1.6e-40 171.8 274 39.4
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 2.1e-40 171.4 294 38.1
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 4.0e-39 167.2 322 37.0
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 5.2e-39 166.8 293 37.2
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 5.2e-39 166.8 266 39.5
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 2.0e-38 164.9 275 36.7
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 1.3e-37 162.2 295 35.6
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 2.2e-37 161.4 286 36.7
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 1.1e-36 159.1 297 36.4
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 2.4e-36 157.9 295 33.9
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 3.2e-36 157.5 289 35.6
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 4.1e-36 157.1 266 38.3
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 5.4e-36 156.8 289 37.0
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 1.6e-35 155.2 274 38.3
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 6.0e-35 153.3 276 38.8
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 1.3e-34 152.1 344 32.8
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 2.3e-34 151.4 310 35.2
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 3.0e-34 151.0 272 39.3
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 1.1e-33 149.1 270 36.3
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 1.5e-33 148.7 307 33.9
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 2.5e-33 147.9 286 33.6
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 3.3e-33 147.5 311 32.5
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 1.6e-32 145.2 271 36.5
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 2.1e-32 144.8 257 35.0
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 2.1e-32 144.8 179 44.1
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 8.1e-32 142.9 299 33.4
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 8.1e-32 142.9 287 34.5
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 8.1e-32 142.9 270 36.3
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 2.3e-31 141.4 293 35.5
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 6.8e-31 139.8 313 32.3
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 8.9e-31 139.4 285 33.7
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 1.5e-30 138.7 295 34.2
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 2.0e-30 138.3 255 36.1
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 4.4e-30 137.1 300 33.7
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 7.6e-30 136.3 279 31.5
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.7e-29 135.2 261 34.9
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 3.2e-28 131.0 283 34.6
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 4.1e-28 130.6 273 35.2
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 5.4e-28 130.2 309 33.0
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 6.0e-27 126.7 330 30.0
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 2.3e-26 124.8 290 32.8
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 3.0e-26 124.4 314 33.8
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 3.3e-25 120.9 247 36.0
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 1.6e-24 118.6 270 33.3
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 8.1e-24 116.3 131 44.3
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 1.1e-23 115.9 131 44.3
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 2.4e-23 114.8 309 27.8
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 3.1e-23 114.4 131 43.5
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.5e-22 112.1 131 42.7
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 3.4e-22 110.9 131 42.7
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 4.4e-22 110.5 127 41.7
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.2e-21 108.2 126 44.4
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 2.9e-21 107.8 147 38.8
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 8.7e-18 96.3 141 36.9
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 1.1e-17 95.9 137 37.2
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 7.3e-17 93.2 380 25.3
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 9.6e-17 92.8 147 36.1
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 1.3e-16 92.4 130 40.8
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 1.6e-16 92.0 292 27.4
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 2.8e-16 91.3 292 27.7
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 1.1e-15 89.4 97 45.4
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 7.6e-14 83.2 277 27.8
Oeu012723.3 Olea europaea HOM05D007736 ORTHO05D009783 4.9e-13 80.5 173 34.1
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 6.2e-08 63.5 254 28.0
Os06g0468400 Oryza sativa ssp. japonica HOM05D007736 ORTHO05D009783 2.6e-06 58.2 260 25.4


User provided reference genes

Program Settings