Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014231g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.7e-126 456.1 239 100.0
Nitab4.5_0000391g0160 Nicotiana tabacum HOM05D003448 ORTHO05D004028 5.5e-93 344.7 206 89.8
Nitab4.5_0004471g0060 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.9e-78 295.8 198 79.8
Nitab4.5_0000391g0120 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.3e-77 292.4 204 77.5
Nitab4.5_0000391g0110 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.0e-75 285.4 207 73.9
Nitab4.5_0004471g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.6e-74 282.7 188 78.2
PGSC0003DMG400046292 Solanum tuberosum HOM05D003448 ORTHO05D004028 2.3e-54 216.5 199 60.8
Nitab4.5_0000391g0100 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.9e-54 215.7 134 80.6
Sopen05g007650 Solanum pennellii HOM05D003448 ORTHO05D004028 5.6e-53 211.8 200 58.0
Sopen05g007670 Solanum pennellii HOM05D003448 ORTHO05D004028 9.9e-50 201.1 199 58.8
Sopen05g007660 Solanum pennellii HOM05D003448 ORTHO05D004028 4.9e-49 198.7 197 58.9
Peaxi162Scf00222g00119 Petunia axillaris HOM05D003448 ORTHO05D004028 2.4e-48 196.4 172 63.4
Sopen05g007690 Solanum pennellii HOM05D003448 ORTHO05D004028 1.1e-37 161.0 192 52.1
PGSC0003DMG400028404 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.1e-37 161.0 188 53.7
Peaxi162Scf00222g00125 Petunia axillaris HOM05D003448 ORTHO05D004028 7.3e-37 158.3 190 51.1
PGSC0003DMG400002851 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.2e-34 151.0 197 47.2
Sopen04g001550 Solanum pennellii HOM05D003448 ORTHO05D004028 4.5e-34 149.1 197 47.2
Nitab4.5_0007467g0030 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.2e-32 142.9 197 47.2
Solyc05g012810.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 6.0e-31 138.7 134 59.0
Solyc05g012850.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 1.1e-24 117.9 101 66.3
Dinv34100 Davidia involucrata HOM05D003448 ORTHO05D004028 3.2e-24 116.3 197 38.1
CiPaw.05G129300 Carya illinoinensis HOM05D003448 ORTHO05D004028 3.5e-23 112.8 197 36.5
RcHm_v2.0_Chr4g0439081 Rosa chinensis HOM05D003448 ORTHO05D004028 4.6e-23 112.5 200 35.0
Solyc05g012860.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 3.0e-22 109.8 117 54.7
Atru.chr11.1710 Acer truncatum HOM05D003448 ORTHO05D004028 8.7e-22 108.2 196 34.2
Lj6P783T35 Lonicera japonica HOM05D003448 ORTHO05D004028 8.7e-22 108.2 197 39.6
Cc11_g12520 Coffea canephora HOM05D003448 ORTHO05D004028 1.5e-21 107.5 195 39.0
CSS0040782 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 4.3e-21 105.9 197 37.1
Duzib248G1355 Durio zibethinus HOM05D003448 ORTHO05D004028 9.6e-21 104.8 196 34.7
FvH4_4g30670 Fragaria vesca HOM05D003448 ORTHO05D004028 1.6e-20 104.0 201 33.8
Gohir.D02G127600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.6e-20 104.0 196 35.2
Gorai.005G143200 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.6e-20 104.0 196 35.2
SGA_v2.0_scaffold36G14418 Striga asiatica HOM05D003448 ORTHO05D004028 2.1e-20 103.6 193 39.4
THA.LOC104801852 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 2.1e-20 103.6 198 35.9
Cfa008923 Carpinus fangiana HOM05D003448 ORTHO05D004028 2.8e-20 103.2 197 38.1
Manes.01G031900 Manihot esculenta HOM05D003448 ORTHO05D004028 2.8e-20 103.2 196 31.1
CANSAT64G1203 Cannabis sativa HOM05D003448 ORTHO05D004028 4.8e-20 102.4 196 35.2
Cpa.g.sc1.73 Carica papaya HOM05D003448 ORTHO05D004028 1.8e-19 100.5 196 34.7
Atru.chr11.1709 Acer truncatum HOM05D003448 ORTHO05D004028 3.1e-19 99.8 197 34.0
CANSAT64G0892 Cannabis sativa HOM05D003448 ORTHO05D004028 4.0e-19 99.4 201 31.8
Lsat_1_v5_gn_3_51801 Lactuca sativa HOM05D003448 ORTHO05D004028 4.0e-19 99.4 200 36.5
Prupe.1G280200 Prunus persica HOM05D003448 ORTHO05D004028 5.3e-19 99.0 198 36.4
Eucgr.G02471 Eucalyptus grandis HOM05D003448 ORTHO05D004028 6.9e-19 98.6 198 39.4
SGA_v2.0_scaffold287G47147 Striga asiatica HOM05D003448 ORTHO05D004028 6.9e-19 98.6 196 33.7
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 9.0e-19 98.2 196 35.2
Lsat_1_v5_gn_4_10361 Lactuca sativa HOM05D003448 ORTHO05D004028 1.2e-18 97.8 201 37.3
COL.COLO4_27962 Corchorus olitorius HOM05D003448 ORTHO05D004028 2.0e-18 97.1 200 35.0
HanXRQChr12g0379221 Helianthus annuus HOM05D003448 ORTHO05D004028 2.0e-18 97.1 200 36.0
Manes.05G106600 Manihot esculenta HOM05D003448 ORTHO05D004028 2.0e-18 97.1 196 31.6
Duzib251G0906 Durio zibethinus HOM05D003448 ORTHO05D004028 3.4e-18 96.3 196 34.7
Lsat_1_v5_gn_8_49320 Lactuca sativa HOM05D003448 ORTHO05D004028 4.5e-18 95.9 197 35.5
Thecc.02G338900 Theobroma cacao HOM05D003448 ORTHO05D004028 7.6e-18 95.1 196 35.2
Lsat_1_v5_gn_8_49260 Lactuca sativa HOM05D003448 ORTHO05D004028 1.7e-17 94.0 197 34.5
MSTRG.2328 Avicennia marina HOM05D003448 ORTHO05D004028 2.9e-17 93.2 198 34.3
Haze_11952 Corylus avellana HOM05D003448 ORTHO05D004028 4.9e-17 92.4 156 37.8
Potri.008G091600 Populus trichocarpa HOM05D003448 ORTHO05D004028 6.5e-17 92.0 199 35.2
CSS0006655 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 8.4e-17 91.7 197 36.5
Cc11_g07300 Coffea canephora HOM05D003448 ORTHO05D004028 8.4e-17 91.7 173 35.3
RcHm_v2.0_Chr4g0439091 Rosa chinensis HOM05D003448 ORTHO05D004028 8.4e-17 91.7 199 33.2
Lj4g0008688 Lotus japonicus HOM05D003448 ORTHO05D004028 1.4e-16 90.9 200 34.5
Gorai.013G089800 Gossypium raimondii HOM05D003448 ORTHO05D004028 3.2e-16 89.7 194 33.5
PGR016G0005 Punica granatum HOM05D003448 ORTHO05D004028 7.1e-16 88.6 196 33.2
PGR119G2543 Punica granatum HOM05D003448 ORTHO05D004028 7.1e-16 88.6 196 33.2
Migut.E00067 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.2e-15 87.8 197 33.0
Aa31LG2G7210 Aethionema arabicum HOM05D003448 ORTHO05D004028 2.1e-15 87.0 198 31.8
Hma1.2p1_0354F.1_g133775 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 2.7e-15 86.7 199 33.7
QL03p069872 Quercus lobata HOM05D003448 ORTHO05D004028 2.7e-15 86.7 197 32.5
Gorai.013G089900 Gossypium raimondii HOM05D003448 ORTHO05D004028 6.0e-15 85.5 194 33.5
Sabra08G0068600 Salix brachista HOM05D003448 ORTHO05D004028 1.3e-14 84.3 199 33.7
SalBow8G5474 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.3e-14 84.3 196 32.7
Eucgr.G02473 Eucalyptus grandis HOM05D003448 ORTHO05D004028 1.8e-14 84.0 139 42.4
Gohir.A13G078300 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.8e-14 84.0 194 33.5
Gohir.D13G078600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.8e-14 84.0 194 33.5
HanXRQChr12g0361861 Helianthus annuus HOM05D003448 ORTHO05D004028 2.3e-14 83.6 168 33.3
HanXRQChr12g0361771 Helianthus annuus HOM05D003448 ORTHO05D004028 3.0e-14 83.2 199 32.2
Oeu021088.1 Olea europaea HOM05D003448 ORTHO05D004028 3.0e-14 83.2 195 31.3
EL10Ac6g13273 Beta vulgaris HOM05D003448 ORTHO05D004028 3.9e-14 82.8 202 32.7
Ciclev10033637m.g Citrus clementina HOM05D003448 ORTHO05D004028 3.9e-14 82.8 203 33.0
Migut.L01240 Erythranthe guttata HOM05D003448 ORTHO05D004028 3.9e-14 82.8 203 30.5
Oeu057654.1 Olea europaea HOM05D003448 ORTHO05D004028 6.7e-14 82.0 138 38.4
Lsat_1_v5_gn_8_49200 Lactuca sativa HOM05D003448 ORTHO05D004028 8.7e-14 81.6 194 31.4
Sp2g14260 Schrenkiella parvula HOM05D003448 ORTHO05D004028 8.7e-14 81.6 203 31.0
ECA246G1613 Erigeron canadensis HOM05D003448 ORTHO05D004028 1.1e-13 81.3 128 41.4
Actinidia12305 Actinidia chinensis HOM05D003448 ORTHO05D004028 1.5e-13 80.9 193 32.6
Lsat_1_v5_gn_8_49240 Lactuca sativa HOM05D003448 ORTHO05D004028 1.9e-13 80.5 195 30.8
Medtr4g082550 Medicago truncatula HOM05D003448 ORTHO05D004028 2.5e-13 80.1 197 28.4
Ca_25944_v3 Cicer arietinum L. HOM05D003448 ORTHO05D004028 7.4e-13 78.6 196 32.7
A02p33350 Brassica napus HOM05D003448 ORTHO05D004028 9.7e-13 78.2 199 30.2
Potri.010G163300 Populus trichocarpa HOM05D003448 ORTHO05D004028 9.7e-13 78.2 197 30.5
Gohir.A13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.3e-12 77.8 194 30.9
Carub.0005s0231 Capsella rubella HOM05D003448 ORTHO05D004028 2.2e-12 77.0 197 28.9
Gohir.D13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.2e-12 77.0 181 33.1
Gorai.013G089600 Gossypium raimondii HOM05D003448 ORTHO05D004028 2.2e-12 77.0 181 32.6
Nitab4.5_0008978g0020 Nicotiana tabacum HOM05D003448 ORTHO05D025922 2.8e-12 76.6 238 28.6
Psat7g154240 Pisum sativum HOM05D003448 ORTHO05D004028 3.7e-12 76.3 197 32.0
Hund25204 Selenicereus undatus HOM05D003448 ORTHO05D004028 6.3e-12 75.5 200 29.5
C09p31190 Brassica napus HOM05D003448 ORTHO05D004028 8.2e-12 75.1 197 29.9
Thhalv10005445m.g Eutrema salsugineum HOM05D003448 ORTHO05D004028 8.2e-12 75.1 209 29.2
PGSC0003DMG400028337 Solanum tuberosum HOM05D003448 ORTHO05D004028 8.2e-12 75.1 88 47.7
AL5G13040 Arabidopsis lyrata HOM05D003448 ORTHO05D004028 1.1e-11 74.7 199 28.1
AT3G11810 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 1.1e-11 74.7 199 28.1
Aqoxy3G03502 Aquilegia oxysepala HOM05D003448 ORTHO05D004028 1.4e-11 74.3 199 34.7
BcaB07g30304 Brassica carinata HOM05D003448 ORTHO05D004028 1.4e-11 74.3 198 30.3
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.4e-11 74.3 103 37.9
unitig_8.g3960 Utricularia gibba HOM05D003448 ORTHO05D004028 1.8e-11 73.9 200 31.0
SalBow2G2694 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.4e-11 73.6 202 26.7
VMungo0251G3339 Vigna mungo HOM05D003448 ORTHO05D004028 2.4e-11 73.6 198 31.8
COL.COLO4_27963 Corchorus olitorius HOM05D003448 ORTHO05D004028 4.1e-11 72.8 196 32.1
Glyma.07G227750 Glycine max HOM05D003448 ORTHO05D004028 5.3e-11 72.4 147 34.7
Glyma.20G030700 Glycine max HOM05D003448 ORTHO05D004028 5.3e-11 72.4 199 30.7
HanXRQChr12g0362021 Helianthus annuus HOM05D003448 ORTHO05D004028 5.3e-11 72.4 100 36.0
Phvul.002G103700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 5.3e-11 72.4 197 33.0
BcaC04g21492 Brassica carinata HOM05D003448 ORTHO05D004028 6.9e-11 72.0 193 30.1
BolC9t55975H Brassica oleracea HOM05D003448 ORTHO05D004028 6.9e-11 72.0 193 30.1
TAR371G1243 Trochodendron aralioides HOM05D003448 ORTHO05D004028 6.9e-11 72.0 192 31.8
Ah.03g134640 Amaranthus hybridus HOM05D003448 ORTHO05D004028 1.2e-10 71.2 214 30.4
AT2G03330 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 1.2e-10 71.2 171 29.2
Glyma.20G030300 Glycine max HOM05D003448 ORTHO05D004028 1.5e-10 70.9 199 32.7
arahy.Tifrunner.gnm1.ann1.57BZA4 Arachis hypogaea HOM05D003448 ORTHO05D004028 2.0e-10 70.5 135 36.3
AUR62032847 Chenopodium quinoa HOM05D003448 ORTHO05D004028 4.5e-10 69.3 198 29.3
HanXRQChr12g0361791 Helianthus annuus HOM05D003448 ORTHO05D004028 4.5e-10 69.3 180 33.3
Phvul.002G168700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 4.5e-10 69.3 175 32.6
A09p24360 Brassica napus HOM05D003448 ORTHO05D004028 5.9e-10 68.9 196 28.6
BcaB07g30674 Brassica carinata HOM05D003448 ORTHO05D004028 1.0e-09 68.2 196 28.1
Lalb_Chr05g0220171 Lupinus albus HOM05D003448 ORTHO05D004028 1.3e-09 67.8 197 33.5
AUR62005855 Chenopodium quinoa HOM05D003448 ORTHO05D004028 1.7e-09 67.4 203 30.0
SalBow2G2515 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.7e-09 67.4 200 30.5
SalBow2G2818 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.7e-09 67.4 200 30.5
DCAR_023813 Daucus carota HOM05D003448 ORTHO05D004028 2.9e-09 66.6 197 32.0
BraA09t38029Z Brassica rapa HOM05D003448 ORTHO05D004028 3.8e-09 66.2 196 28.1
Lalb_Chr05g0220181 Lupinus albus HOM05D003448 ORTHO05D004028 5.0e-09 65.9 156 34.6
Sopen05g007630 Solanum pennellii HOM05D025680 ORTHO05D025922 6.5e-09 65.5 102 41.2
Lsat_1_v5_gn_8_49220 Lactuca sativa HOM05D003448 ORTHO05D004028 8.5e-09 65.1 200 29.5
VMungo0251G1914 Vigna mungo HOM05D003448 ORTHO05D004028 8.5e-09 65.1 181 31.5
CARHR145690 Cardamine hirsuta HOM05D003448 ORTHO05D004028 1.4e-08 64.3 199 27.6
Medtr4g082360 Medicago truncatula HOM05D003448 ORTHO05D004028 1.4e-08 64.3 198 28.3
THA.LOC104824071 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 3.2e-08 63.2 202 29.2
MD12G1099700 Malus domestica HOM05D003448 ORTHO05D004028 7.2e-08 62.0 133 30.1
CAN.G964.17 Capsicum annuum HOM05D000002 ORTHO05D000001 1.6e-07 60.8 70 54.3
CSS0034838 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 2.1e-07 60.5 78 41.0
Glyma.20G030600 Glycine max HOM05D003448 ORTHO05D004028 2.7e-07 60.1 197 29.4
BcaC03g17206 Brassica carinata HOM05D003448 ORTHO05D004028 3.6e-07 59.7 197 27.4
BcaC03g17209 Brassica carinata HOM05D003448 ORTHO05D004028 3.6e-07 59.7 197 27.4
C02p51340 Brassica napus HOM05D003448 ORTHO05D004028 6.1e-07 58.9 131 29.8
C02p51370 Brassica napus HOM05D003448 ORTHO05D004028 6.1e-07 58.9 131 29.8
SEGI_06194 Sequoiadendron giganteum HOM05D003448 ORTHO05D004028 6.1e-07 58.9 200 30.0
TAR371G0373 Trochodendron aralioides HOM05D003448 ORTHO05D004028 6.1e-07 58.9 171 33.9
Migut.L01238 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.0e-06 58.2 205 24.9
ATR0730G136 Amborella trichopoda HOM05D003448 ORTHO05D004028 3.0e-06 56.6 196 28.1


User provided reference genes

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