Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.1e-121 440.3 261 100.0
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.1e-115 420.2 261 85.8
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 6.0e-101 371.3 261 74.7
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 2.3e-100 369.4 261 73.9
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 8.7e-100 367.5 261 73.9
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 2.5e-99 365.9 261 73.6
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 3.0e-92 342.4 283 68.9
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 7.9e-69 264.6 264 54.2
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 2.8e-66 256.1 259 54.1
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 7.0e-65 251.5 221 59.3
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 3.5e-64 249.2 264 52.7
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 5.9e-64 248.4 267 50.9
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 1.1e-62 244.2 260 51.5
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 2.5e-62 243.0 259 51.4
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 2.7e-61 239.6 257 51.8
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 4.7e-61 238.8 236 54.2
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 6.1e-61 238.4 260 49.6
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 1.4e-60 237.3 261 49.4
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.8e-60 236.9 257 52.5
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 4.0e-60 235.7 259 51.0
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 4.0e-60 235.7 236 53.0
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 3.3e-59 232.6 222 53.6
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 3.3e-59 232.6 222 53.2
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 4.4e-59 232.3 259 51.0
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 2.8e-58 229.6 256 50.0
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 1.8e-57 226.9 253 47.4
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 4.1e-57 225.7 253 49.0
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 7.0e-57 224.9 257 47.9
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 7.0e-57 224.9 257 49.4
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.6e-56 223.8 256 47.7
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 1.6e-56 223.8 258 47.3
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 2.7e-56 223.0 260 48.8
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 3.5e-56 222.6 258 49.6
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 4.5e-56 222.2 257 49.4
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 1.0e-55 221.1 222 53.6
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 1.3e-55 220.7 258 50.4
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 1.3e-55 220.7 226 50.4
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 1.7e-55 220.3 221 50.7
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 2.2e-55 219.9 226 50.4
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 2.9e-55 219.5 258 47.3
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 2.9e-55 219.5 258 48.8
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 5.0e-55 218.8 259 48.3
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 8.5e-55 218.0 259 45.6
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.1e-54 217.6 227 50.7
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 3.2e-54 216.1 257 46.3
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 5.5e-54 215.3 257 46.3
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 9.4e-54 214.5 261 47.1
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 1.6e-53 213.8 257 47.5
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 2.1e-53 213.4 261 45.6
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 2.1e-53 213.4 261 46.0
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.7e-53 213.0 256 46.1
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.7e-53 213.0 256 46.1
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 2.7e-53 213.0 256 46.1
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 6.1e-53 211.8 226 49.1
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 6.1e-53 211.8 257 47.5
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 8.0e-53 211.5 261 44.4
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 8.0e-53 211.5 193 56.0
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.0e-52 211.1 256 45.7
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.0e-52 211.1 256 45.3
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 1.0e-52 211.1 234 48.7
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 1.4e-52 210.7 258 45.7
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 2.3e-52 209.9 221 51.1
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 3.0e-52 209.5 256 46.5
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 4.0e-52 209.1 261 46.7
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 5.2e-52 208.8 259 43.2
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 6.8e-52 208.4 257 45.9
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 6.8e-52 208.4 257 45.9
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 6.8e-52 208.4 210 51.0
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 8.8e-52 208.0 259 42.9
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 1.5e-51 207.2 259 45.2
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 5.7e-51 205.3 256 43.4
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 1.3e-50 204.1 212 47.2
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 1.7e-50 203.8 260 44.2
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 1.7e-50 203.8 160 69.4
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 1.7e-50 203.8 257 44.7
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 2.8e-50 203.0 258 43.0
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 2.8e-50 203.0 211 47.4
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 2.8e-50 203.0 261 46.0
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 4.8e-50 202.2 256 43.8
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 6.3e-50 201.8 212 47.6
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 6.3e-50 201.8 256 44.9
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 1.8e-49 200.3 212 45.8
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 1.8e-49 200.3 212 47.6
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 4.1e-49 199.1 259 43.6
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 4.1e-49 199.1 258 43.4
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 5.4e-49 198.7 277 42.6
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 1.6e-48 197.2 212 46.2
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 2.7e-48 196.4 257 44.7
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 3.5e-48 196.1 261 44.8
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 4.5e-48 195.7 224 48.7
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 4.5e-48 195.7 214 50.0
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 5.9e-48 195.3 258 42.2
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 7.7e-48 194.9 192 52.6
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 1.0e-47 194.5 260 45.0
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 1.0e-47 194.5 224 48.7
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 1.3e-47 194.1 212 45.3
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 1.3e-47 194.1 212 45.3
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 1.7e-47 193.7 212 45.3
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 1.7e-47 193.7 212 45.3
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 1.7e-47 193.7 212 45.3
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 2.9e-47 193.0 260 43.5
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 8.5e-47 191.4 180 57.8
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 2.5e-46 189.9 149 61.1
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 2.5e-46 189.9 260 41.9
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 4.2e-46 189.1 212 44.8
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 7.2e-46 188.3 221 47.1
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 1.6e-45 187.2 276 42.0
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 2.1e-45 186.8 221 47.1
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 2.7e-45 186.4 210 47.1
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.0e-44 184.5 221 46.6
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.0e-44 184.5 163 57.1
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.8e-44 183.7 274 40.9
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.3e-44 183.3 207 48.3
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 4.0e-44 182.6 215 46.5
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 4.4e-43 179.1 181 51.4
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 4.9e-42 175.6 212 45.8
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 4.9e-42 175.6 258 39.5
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 1.1e-41 174.5 277 40.4
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 2.0e-40 170.2 212 43.9
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 3.5e-40 169.5 146 54.1
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 4.5e-40 169.1 153 58.2
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 9.5e-38 161.4 115 73.9
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 1.2e-37 161.0 259 39.0
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 2.6e-35 153.3 262 39.3
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.8e-33 147.1 171 45.0
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 4.6e-32 142.5 267 37.1
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 1.7e-31 140.6 260 36.2
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 7.3e-30 135.2 183 43.2
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 1.2e-29 134.4 260 35.0
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 3.1e-28 129.8 232 38.4
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 8.9e-28 128.3 263 34.6
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 8.3e-26 121.7 276 33.0
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 1.9e-25 120.6 212 36.3
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 3.2e-25 119.8 229 35.4
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 5.4e-25 119.0 228 33.8
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 3.3e-22 109.8 74 70.3
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 1.9e-14 84.0 172 33.7
CBR_g74690 Chara braunii HOM05D004951 ORTHO05D005840 2.3e-12 77.0 138 33.3
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 4.0e-12 76.3 62 51.6
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 2.4e-09 67.0 117 35.0
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 1.7e-07 60.8 124 33.1


User provided reference genes

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