Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014148g0010 Nicotiana tabacum HOM05D004397 ORTHO05D005271 1.1e-40 169.5 80 100.0
Nitab4.5_0003603g0020 Nicotiana tabacum HOM05D004397 ORTHO05D005271 1.6e-36 155.6 80 92.5
Nitab4.5_0006802g0080 Nicotiana tabacum HOM05D004397 ORTHO05D005271 2.1e-36 155.2 80 92.5
Nitab4.5_0000678g0090 Nicotiana tabacum HOM05D004397 ORTHO05D005271 9.0e-32 139.8 80 82.5
Nitab4.5_0003501g0040 Nicotiana tabacum HOM05D004397 ORTHO05D005271 5.0e-30 134.0 80 81.2
Nitab4.5_0002335g0060 Nicotiana tabacum HOM05D004397 ORTHO05D005271 3.9e-27 124.4 81 77.8
Nitab4.5_0003508g0010 Nicotiana tabacum HOM05D004397 ORTHO05D005271 5.1e-27 124.0 81 76.5
Nitab4.5_0006174g0030 Nicotiana tabacum HOM05D004397 ORTHO05D005271 8.8e-27 123.2 69 87.0
Peaxi162Scf01073g00117 Petunia axillaris HOM05D004397 ORTHO05D005271 2.5e-26 121.7 81 75.3
Solyc12g088730.2 Solanum lycopersicum HOM05D004397 ORTHO05D005271 3.3e-26 121.3 81 75.3
Sopen12g030630 Solanum pennellii HOM05D004397 ORTHO05D005271 3.3e-26 121.3 81 75.3
PGSC0003DMG400015407 Solanum tuberosum HOM05D004397 ORTHO05D005271 3.3e-26 121.3 81 75.3
Cpa.g.sc152.55 Carica papaya HOM05D004397 ORTHO05D005271 7.4e-26 120.2 81 74.1
CiPaw.09G097700 Carya illinoinensis HOM05D004397 ORTHO05D005271 7.4e-26 120.2 81 74.1
GSVIVG01004810001 Vitis vinifera HOM05D004397 ORTHO05D005271 7.4e-26 120.2 81 74.1
CiPaw.10G074300 Carya illinoinensis HOM05D004397 ORTHO05D005271 9.7e-26 119.8 81 72.8
Dinv12378 Davidia involucrata HOM05D004397 ORTHO05D005271 9.7e-26 119.8 81 74.1
Duzib192G0217 Durio zibethinus HOM05D004397 ORTHO05D005271 2.2e-25 118.6 81 74.1
Nn1g07269 Nelumbo nucifera HOM05D004397 ORTHO05D005271 2.2e-25 118.6 81 71.6
QL03p004896 Quercus lobata HOM05D004397 ORTHO05D005271 2.2e-25 118.6 81 71.6
QL05p071977 Quercus lobata HOM05D004397 ORTHO05D005271 2.2e-25 118.6 81 71.6
SGA_v2.0_scaffold543G52819 Striga asiatica HOM05D004397 ORTHO05D005271 2.2e-25 118.6 81 74.1
TAR626G0623 Trochodendron aralioides HOM05D004397 ORTHO05D005271 2.2e-25 118.6 81 72.8
Cfa000163 Carpinus fangiana HOM05D004397 ORTHO05D005271 2.8e-25 118.2 81 74.1
Haze_06856 Corylus avellana HOM05D004397 ORTHO05D005271 2.8e-25 118.2 81 74.1
HanXRQChr01g0014371 Helianthus annuus HOM05D004397 ORTHO05D005271 2.8e-25 118.2 81 74.1
Thecc.06G227900 Theobroma cacao HOM05D004397 ORTHO05D005271 2.8e-25 118.2 81 74.1
arahy.Tifrunner.gnm1.ann1.K9NX2S Arachis hypogaea HOM05D004397 ORTHO05D005271 3.7e-25 117.9 81 72.8
Hma1.2p1_0226F.1_g095780 Hydrangea macrophylla HOM05D004397 ORTHO05D005271 3.7e-25 117.9 81 72.8
CSS0021903 Camellia sinensis var. sinensis HOM05D004397 ORTHO05D005271 4.8e-25 117.5 81 72.8
CSS0044102 Camellia sinensis var. sinensis HOM05D004397 ORTHO05D005271 4.8e-25 117.5 81 72.8
MSTRG.1068 Avicennia marina HOM05D004397 ORTHO05D005271 6.3e-25 117.1 81 72.8
TAR629G1518 Trochodendron aralioides HOM05D004397 ORTHO05D005271 6.3e-25 117.1 81 71.6
PGR004G1068 Punica granatum HOM05D004397 ORTHO05D005271 1.1e-24 116.3 81 72.8
Sed0027185 Sechium edule HOM05D004397 ORTHO05D005271 1.1e-24 116.3 81 72.8
TPR.G34683 Trifolium pratense HOM05D004397 ORTHO05D005271 1.1e-24 116.3 81 71.6
Medtr3g107920 Medicago truncatula HOM05D004397 ORTHO05D005271 1.4e-24 115.9 81 70.4
THA.LOC104809478 Tarenaya hassleriana HOM05D004397 ORTHO05D005271 1.4e-24 115.9 81 72.8
FvH4_3g01410 Fragaria vesca HOM05D004397 ORTHO05D005271 1.8e-24 115.5 81 71.6
FAN21G0257 Fragaria x ananassa HOM05D004397 ORTHO05D005271 1.8e-24 115.5 81 71.6
FAN25G3034 Fragaria x ananassa HOM05D004397 ORTHO05D005271 1.8e-24 115.5 81 71.6
Oeu023826.3 Olea europaea HOM05D004397 ORTHO05D005271 1.8e-24 115.5 81 71.6
Aa31LG8G17020 Aethionema arabicum HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 72.8
BcaB08g34896 Brassica carinata HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 72.8
BcaC07g41228 Brassica carinata HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 72.8
A09p59050 Brassica napus HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 72.8
C08p42330 Brassica napus HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 72.8
BolC8t51793H Brassica oleracea HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 72.8
BraA09t41289Z Brassica rapa HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 72.8
CsaV3_6G048740 Cucumis sativus L. HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 71.6
Sed0005973 Sechium edule HOM05D004397 ORTHO05D005271 2.4e-24 115.2 81 71.6
BcaC06g36686 Brassica carinata HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
A07p00590 Brassica napus HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
C07p01050 Brassica napus HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
BolC7t40544H Brassica oleracea HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
BraA07t27855Z Brassica rapa HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
ClCG01G021700 Citrullus lanatus HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
MD05G1352400 Malus domestica HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 72.8
MD10G1326400 Malus domestica HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 72.8
Phvul.006G146000 Phaseolus vulgaris HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 70.4
Potri.004G004800 Populus trichocarpa HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 72.8
unitig_37.g12949 Utricularia gibba HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
Ca_00691_v3 Cicer arietinum L. HOM05D004397 ORTHO05D005271 4.1e-24 114.4 79 72.2
Cc10_g04670 Coffea canephora HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 71.6
Lj4A769T44 Lonicera japonica HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 70.4
Lalb_Chr20g0118941 Lupinus albus HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 70.4
Prupe.2G035900 Prunus persica HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 71.6
Sp3g33370 Schrenkiella parvula HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 71.6
Migut.N02747 Erythranthe guttata HOM05D004397 ORTHO05D005271 5.3e-24 114.0 81 71.6
RcHm_v2.0_Chr5g0002131 Rosa chinensis HOM05D004397 ORTHO05D005271 5.3e-24 114.0 81 70.4
Atru.chr10.2278 Acer truncatum HOM05D004397 ORTHO05D005271 6.9e-24 113.6 81 72.8
Aqoxy1G03506 Aquilegia oxysepala HOM05D004397 ORTHO05D005271 6.9e-24 113.6 81 69.1
COL.COLO4_31830 Corchorus olitorius HOM05D004397 ORTHO05D005271 6.9e-24 113.6 81 71.6
Migut.L00082 Erythranthe guttata HOM05D004397 ORTHO05D005271 6.9e-24 113.6 81 71.6
Glyma.09G007300 Glycine max HOM05D004397 ORTHO05D005271 9.1e-24 113.2 81 69.1
AT2G20060 Arabidopsis thaliana HOM05D004397 ORTHO05D005271 1.2e-23 112.8 81 70.4
Phvul.010G046600 Phaseolus vulgaris HOM05D004397 ORTHO05D005271 1.2e-23 112.8 81 69.1
MSTRG.25075 Avicennia marina HOM05D004397 ORTHO05D005271 1.5e-23 112.5 81 70.4
Thhalv10002043m.g Eutrema salsugineum HOM05D004397 ORTHO05D005271 1.5e-23 112.5 81 71.6
Manes.16G003100 Manihot esculenta HOM05D004397 ORTHO05D005271 1.5e-23 112.5 81 70.4
PSO063G2973 Papaver somniferum HOM05D004397 ORTHO05D005271 1.5e-23 112.5 80 70.0
PSO782G1961 Papaver somniferum HOM05D004397 ORTHO05D005271 1.5e-23 112.5 80 70.0
Carub.0003s3434 Capsella rubella HOM05D004397 ORTHO05D005271 2.0e-23 112.1 81 70.4
DCAR_019438 Daucus carota HOM05D004397 ORTHO05D005271 2.0e-23 112.1 81 70.4
Gohir.A05G173000 Gossypium hirsutum HOM05D004397 ORTHO05D005271 2.0e-23 112.1 81 69.1
Gohir.D05G176000 Gossypium hirsutum HOM05D004397 ORTHO05D005271 2.0e-23 112.1 81 69.1
Gorai.009G181400 Gossypium raimondii HOM05D004397 ORTHO05D005271 2.0e-23 112.1 81 69.1
Lsat_1_v5_gn_4_51441 Lactuca sativa HOM05D004397 ORTHO05D005271 2.0e-23 112.1 81 70.4
Glyma.15G111700 Glycine max HOM05D004397 ORTHO05D005271 2.6e-23 111.7 81 67.9
Psat5g077520 Pisum sativum HOM05D004397 ORTHO05D005271 2.6e-23 111.7 81 67.9
Sabra04G0002500 Salix brachista HOM05D004397 ORTHO05D005271 2.6e-23 111.7 81 70.4
VMungo0540G2306 Vigna mungo HOM05D004397 ORTHO05D005271 2.6e-23 111.7 81 67.9
Gohir.A06G150933 Gossypium hirsutum HOM05D004397 ORTHO05D005271 3.4e-23 111.3 73 74.0
THA.LOC104823539 Tarenaya hassleriana HOM05D004397 ORTHO05D005271 3.4e-23 111.3 81 70.4
AL3G48030 Arabidopsis lyrata HOM05D004397 ORTHO05D005271 4.5e-23 110.9 81 69.1
DCAR_002834 Daucus carota HOM05D004397 ORTHO05D005271 4.5e-23 110.9 81 69.1
ECA236G1813 Erigeron canadensis HOM05D004397 ORTHO05D005271 4.5e-23 110.9 81 69.1
MBI05_g10534_MAGBIO Magnolia biondii HOM05D004397 ORTHO05D005271 4.5e-23 110.9 81 70.4
CARHR110570 Cardamine hirsuta HOM05D004397 ORTHO05D005271 5.9e-23 110.5 81 69.1
SalBow7G1927 Salvia bowleyana HOM05D004397 ORTHO05D005271 5.9e-23 110.5 81 70.4
Hund00398 Selenicereus undatus HOM05D004397 ORTHO05D005271 7.7e-23 110.2 81 69.1
Sc16g0006660 Simmondsia chinensis HOM05D004397 ORTHO05D005271 1.0e-22 109.8 81 69.1
Zm00001eb061360 Zea mays HOM05D004397 ORTHO05D005271 1.3e-22 109.4 81 69.1
MBI05_g23392_MAGBIO Magnolia biondii HOM05D004397 ORTHO05D005271 2.2e-22 108.6 81 69.1
Os11g0585700 Oryza sativa ssp. japonica HOM05D004397 ORTHO05D005271 2.2e-22 108.6 81 69.1
CDE03G0208 Ceratophyllum demersum HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 67.9
CDE06G0724 Ceratophyllum demersum HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 67.9
Peaxi162Scf01027g00012 Petunia axillaris HOM05D004397 ORTHO05D005271 3.8e-22 107.8 87 62.1
TWI38G0690 Tripterygium wilfordii HOM05D004397 ORTHO05D005271 5.0e-22 107.5 81 69.1
Rhsim04G0075400 Rhododendron simsii HOM05D004397 ORTHO05D005271 6.5e-22 107.1 81 65.4
ATR0307G084 Amborella trichopoda HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 65.4
Eucgr.G00454 Eucalyptus grandis HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 66.7
vmacro09207 Vaccinium macrocarpon HOM05D004397 ORTHO05D005271 1.1e-21 106.3 84 63.1
AUR62008935 Chenopodium quinoa HOM05D004397 ORTHO05D005271 3.2e-21 104.8 78 69.2
TWI63G0777 Tripterygium wilfordii HOM05D004397 ORTHO05D005271 4.2e-21 104.4 81 67.9
Lj6g0022899 Lotus japonicus HOM05D004397 ORTHO05D005271 9.4e-21 103.2 78 65.4
EL10Ac7g17869 Beta vulgaris HOM05D004397 ORTHO05D005271 1.2e-20 102.8 81 65.4
Nitab4.5_0003290g0070 Nicotiana tabacum HOM05D004397 ORTHO05D005271 1.2e-20 102.8 80 66.2
BcaB03g16800 Brassica carinata HOM05D004397 ORTHO05D005271 4.7e-20 100.9 72 70.8
Ah.08g214470 Amaranthus hybridus HOM05D004397 ORTHO05D005271 1.8e-19 99.0 81 61.7
HPP92_018530 Vanilla planifolia HOM05D004397 ORTHO05D005271 1.8e-19 99.0 81 63.0
Nitab4.5_0004376g0020 Nicotiana tabacum HOM05D004397 ORTHO05D005271 6.7e-19 97.1 66 75.8
SHI04147 Sapria himalayana HOM05D004397 ORTHO05D005271 6.7e-19 97.1 81 60.5
Nitab4.5_0002335g0080 Nicotiana tabacum HOM05D004397 ORTHO05D005271 8.8e-19 96.7 83 66.3
SGA_v2.0_scaffold404G51008 Striga asiatica HOM05D004397 ORTHO05D005271 2.0e-18 95.5 53 83.0
CAN.G1194.11 Capsicum annuum HOM05D004397 ORTHO05D005271 3.3e-18 94.7 66 74.2
Oeu012435.1 Olea europaea HOM05D004397 ORTHO05D005271 4.8e-17 90.9 66 71.2
Mapoly0162s0019 Marchantia polymorpha HOM05D004397 ORTHO05D005271 6.3e-17 90.5 79 60.8
Actinidia22115 Actinidia chinensis HOM05D004397 ORTHO05D005271 1.1e-16 89.7 66 69.7
AUR62001111 Chenopodium quinoa HOM05D004397 ORTHO05D005271 5.3e-16 87.4 68 66.2
SMO116G0021 Selaginella moellendorffii HOM05D004397 ORTHO05D005271 1.2e-15 86.3 81 53.1
Pp3c13_15330 Physcomitrium patens HOM05D004397 ORTHO05D005271 2.0e-15 85.5 79 57.0
AagrBONN_evm.TU.Sc2ySwM_228.2975 Anthoceros agrestis HOM05D004397 ORTHO05D005271 2.6e-15 85.1 79 58.2
CBR_g40797 Chara braunii HOM05D004397 ORTHO05D005271 3.5e-15 84.7 80 55.0
BcaB06g28897 Brassica carinata HOM05D004397 ORTHO05D005271 1.0e-14 83.2 66 65.2
MELO3C007416.2 Cucumis melo HOM05D004397 ORTHO05D005271 4.4e-10 67.8 35 85.7
Actinidia30586 Actinidia chinensis HOM05D004397 ORTHO05D005271 8.2e-09 63.5 41 70.7
Gorai.010G183700 Gossypium raimondii HOM05D004397 ORTHO05D005271 2.4e-08 62.0 52 63.5
Cre12.g520400 Chlamydomonas reinhardtii HOM05D004397 ORTHO05D005271 9.1e-08 60.1 65 47.7
Lsat_1_v5_gn_7_66500 Lactuca sativa HOM05D004397 ORTHO05D005271 9.1e-08 60.1 35 74.3
Migut.O00819 Erythranthe guttata HOM05D004397 ORTHO05D005271 2.0e-07 58.9 51 60.8
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 4.5e-07 57.8 42 71.4
Gohir.D06G157201 Gossypium hirsutum HOM05D004397 ORTHO05D005271 4.5e-07 57.8 36 75.0
Prupe.4G015300 Prunus persica HOM05D004397 ORTHO05D005271 4.5e-07 57.8 37 73.0


User provided reference genes

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