Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014138g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.4e-161 571.6 294 100.0
Nitab4.5_0002356g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.8e-101 373.2 304 68.4
Nitab4.5_0005587g0100 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-95 353.6 294 66.0
Nitab4.5_0000287g0210 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.1e-69 267.7 288 55.6
Nitab4.5_0000038g0120 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.5e-65 252.7 174 76.4
Nitab4.5_0004614g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.0e-65 251.9 178 77.5
Nitab4.5_0003997g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-62 243.8 286 52.4
Nitab4.5_0002507g0110 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.4e-58 229.9 182 69.8
Nitab4.5_0002588g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 9.3e-58 228.0 215 62.3
Nitab4.5_0003606g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-56 224.2 182 69.8
Nitab4.5_0004989g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.4e-53 214.2 289 47.1
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 4.9e-51 205.7 273 44.0
Nitab4.5_0020090g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 7.4e-47 191.8 210 49.5
Solyc12g039050.3 Solanum lycopersicum HOM05D000876 ORTHO05D000285 1.4e-45 187.6 186 53.2
Nitab4.5_0000259g0140 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.0e-44 183.7 126 74.6
Nitab4.5_0007287g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.6e-44 183.3 122 74.6
Nitab4.5_0028034g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-43 180.6 194 51.5
PGSC0003DMG400041016 Solanum tuberosum HOM05D007579 ORTHO05D000285 3.2e-42 176.4 200 47.0
Nitab4.5_0004630g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000037 1.2e-41 174.5 124 74.2
Nitab4.5_0000297g0280 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.3e-40 170.2 210 46.7
Peaxi162Scf00593g00324 Petunia axillaris HOM05D007579 ORTHO05D000285 2.3e-40 170.2 198 47.5
Nitab4.5_0000720g0130 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-38 164.5 112 73.2
Peaxi162Scf00002g02220 Petunia axillaris HOM05D000876 ORTHO05D000285 6.3e-38 162.2 201 45.8
Nitab4.5_0002414g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.1e-37 159.5 160 55.0
Nitab4.5_0000915g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.2e-36 157.9 344 35.5
Nitab4.5_0000359g0120 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-36 157.5 169 56.2
Nitab4.5_0002668g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-35 154.1 106 76.4
Nitab4.5_0012419g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-35 154.1 113 76.1
Nitab4.5_0000391g0290 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.0e-35 152.5 110 74.5
Nitab4.5_0001611g0070 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.2e-34 149.8 204 44.1
Nitab4.5_0001796g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.2e-34 149.8 156 51.3
Nitab4.5_0003679g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.5e-34 149.1 139 61.9
Nitab4.5_0003679g0100 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.5e-31 140.2 150 60.7
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 3.3e-31 139.8 184 44.0
Nitab4.5_0003230g0090 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.8e-30 136.7 269 34.9
Nitab4.5_0002600g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.8e-30 136.0 246 39.0
Nitab4.5_0000506g0250 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.3e-30 135.6 182 44.0
Nitab4.5_0002060g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.4e-29 134.4 94 73.4
Nitab4.5_0002432g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.5e-28 131.0 132 52.3
Nitab4.5_0000059g0640 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.5e-27 125.6 111 57.7
Nitab4.5_0001614g0210 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.9e-26 124.0 167 46.1
PGSC0003DMG400037326 Solanum tuberosum HOM05D007579 ORTHO05D000285 3.2e-26 123.2 137 48.9
Nitab4.5_0004630g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.2e-26 122.9 125 56.0
Peaxi162Scf00174g00006 Petunia axillaris HOM05D007579 ORTHO05D000285 1.4e-24 117.9 139 48.2
Nitab4.5_0000025g0280 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.0e-24 116.7 80 70.0
Peaxi162Scf00338g00014 Petunia axillaris HOM05D007579 ORTHO05D000285 3.4e-20 103.2 151 42.4
Peaxi162Scf75076g00002 Petunia axillaris HOM05D007579 ORTHO05D000285 4.5e-20 102.8 150 42.0
Nitab4.5_0002588g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.9e-20 102.4 51 88.2
Nitab4.5_0002745g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 7.7e-20 102.1 175 40.0
Nitab4.5_0000062g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.3e-19 101.3 245 33.1
Nitab4.5_0008299g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.2e-18 96.3 138 42.0
Peaxi162Scf00024g00024 Petunia axillaris HOM05D007579 ORTHO05D000285 5.5e-18 95.9 166 34.9
Nitab4.5_0006555g0040 Nicotiana tabacum HOM05D007579 ORTHO05D284009 7.9e-17 92.0 145 41.4
Peaxi162Scf00558g00416 Petunia axillaris HOM05D007579 ORTHO05D000285 2.3e-16 90.5 51 74.5
Nitab4.5_0000666g0040 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.0e-16 90.1 110 49.1
Nitab4.5_0006822g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 3.9e-16 89.7 159 37.7
CAN.G495.13 Capsicum annuum HOM05D007579 ORTHO05D000285 6.7e-16 89.0 82 56.1
Peaxi162Scf00298g00613 Petunia axillaris HOM05D000034 ORTHO05D000037 4.4e-15 86.3 146 36.3
Nitab4.5_0007412g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.7e-15 85.9 84 60.7
Nitab4.5_0001811g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 7.4e-15 85.5 245 29.4
Nitab4.5_0001811g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-14 84.3 67 62.7
Nitab4.5_0009554g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.7e-14 84.3 60 78.3
Nitab4.5_0000801g0050 Nicotiana tabacum HOM05D007579 ORTHO05D000285 8.2e-14 82.0 96 50.0
Nitab4.5_0004668g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 8.2e-14 82.0 43 83.7
Peaxi162Scf00042g02110 Petunia axillaris HOM05D007579 ORTHO05D000285 8.2e-14 82.0 132 41.7
Nitab4.5_0000059g0630 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.1e-13 81.6 130 44.6
DCAR_020231 Daucus carota HOM05D000876 ORTHO05D000285 1.8e-13 80.9 205 31.2
CAN.G462.3 Capsicum annuum HOM05D000876 ORTHO05D000285 5.3e-13 79.3 51 68.6
Nitab4.5_0003708g0030 Nicotiana tabacum HOM05D007579 ORTHO05D000285 5.3e-13 79.3 46 76.1
Nitab4.5_0000545g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.6e-12 77.0 94 46.8
CAN.G732.3 Capsicum annuum HOM05D000902 ORTHO05D000832 1.0e-11 75.1 80 47.5
CAN.G2500.1 Capsicum annuum HOM05D007579 ORTHO05D000285 3.8e-11 73.2 160 31.2
DCAR_031892 Daucus carota HOM05D000876 ORTHO05D000285 1.9e-10 70.9 203 27.6
Lsat_1_v5_gn_6_85680 Lactuca sativa HOM05D009382 ORTHO05D000285 2.5e-10 70.5 208 30.3
Nitab4.5_0012930g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 2.5e-10 70.5 98 40.8
Lsat_1_v5_gn_5_190881 Lactuca sativa HOM05D009382 ORTHO05D000285 4.2e-10 69.7 206 32.5
Oeu060831.2 Olea europaea HOM05D000876 ORTHO05D000285 4.2e-10 69.7 64 54.7
Lsat_1_v5_gn_9_80960 Lactuca sativa HOM05D009382 ORTHO05D000285 7.2e-10 68.9 273 28.2
DCAR_020120 Daucus carota HOM05D000876 ORTHO05D000285 1.2e-09 68.2 221 28.1
Nitab4.5_0005324g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.6e-09 67.8 81 50.6
Lsat_1_v5_gn_3_25080 Lactuca sativa HOM05D009382 ORTHO05D000285 3.6e-09 66.6 202 31.2
Nitab4.5_0003606g0080 Nicotiana tabacum HOM05D007579 ORTHO05D283450 3.6e-09 66.6 33 93.9
TWI75G0795 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 3.6e-09 66.6 218 24.3
Nitab4.5_0000212g0300 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.7e-09 66.2 171 29.8
Peaxi162Scf00973g00320 Petunia axillaris HOM05D007579 ORTHO05D000285 4.7e-09 66.2 117 38.5
Nitab4.5_0002535g0060 Nicotiana tabacum HOM05D007579 ORTHO05D000285 8.0e-09 65.5 80 50.0
TWI81G0918 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.4e-08 64.7 219 24.2
Lsat_1_v5_gn_3_29260 Lactuca sativa HOM05D009382 ORTHO05D000285 1.8e-08 64.3 208 29.8
CAN.G195.26 Capsicum annuum HOM05D007579 ORTHO05D000285 2.3e-08 63.9 113 35.4
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 2.3e-08 63.9 184 30.4
QL01p041709 Quercus lobata HOM05D000876 ORTHO05D000285 2.3e-08 63.9 159 34.0
QL03p014458 Quercus lobata HOM05D000876 ORTHO05D000285 3.0e-08 63.5 159 33.3
Nitab4.5_0003708g0020 Nicotiana tabacum HOM05D007579 ORTHO05D000285 4.0e-08 63.2 92 41.3
TWI23G0996 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.0e-08 63.2 225 27.6
TWI34G1578 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.0e-08 63.2 225 27.6
TWI36G1398 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.0e-08 63.2 215 23.3
TWI56G0298 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.0e-08 63.2 234 24.4
Glyma.19G101700 Glycine max HOM05D000876 ORTHO05D000285 5.2e-08 62.8 210 27.6
Lsat_1_v5_gn_2_22181 Lactuca sativa HOM05D009382 ORTHO05D000285 6.7e-08 62.4 208 30.3
QL06p033300 Quercus lobata HOM05D000876 ORTHO05D000285 6.7e-08 62.4 159 33.3
TWI75G1494 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.7e-08 62.4 225 27.6
Nitab4.5_0012930g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 8.8e-08 62.0 85 44.7
QL08p009302 Quercus lobata HOM05D000876 ORTHO05D000285 1.2e-07 61.6 159 33.3
PGR042G0711 Punica granatum HOM05D003171 ORTHO05D000921 1.5e-07 61.2 184 29.9
TWI38G0708 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.5e-07 61.2 218 27.5
TWI56G0680 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.5e-07 61.2 212 25.5
Lsat_1_v5_gn_9_88141 Lactuca sativa HOM05D009382 ORTHO05D000285 2.0e-07 60.8 208 31.2
TWI09G1617 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.6e-07 60.5 218 25.7
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-07 60.1 202 26.7
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-07 60.1 208 26.4
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-07 60.1 202 26.7
PGR031G3762 Punica granatum HOM05D003171 ORTHO05D000921 4.4e-07 59.7 184 29.3
ECA236G2545 Erigeron canadensis HOM05D009081 ORTHO05D000285 5.7e-07 59.3 260 23.1
Nitab4.5_0007287g0070 Nicotiana tabacum HOM05D007579 ORTHO05D000285 7.5e-07 58.9 87 47.1
TWI38G1581 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 7.5e-07 58.9 219 26.0
TWI56G0962 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 7.5e-07 58.9 36 63.9
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 9.7e-07 58.5 69 40.6
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 58.2 228 28.1
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 1.3e-06 58.2 205 24.9
Lsat_1_v5_gn_0_5760 Lactuca sativa HOM05D009382 ORTHO05D000285 1.3e-06 58.2 165 35.2
Potri.008G074066 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.3e-06 58.2 208 30.8
PGR031G1431 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-06 58.2 185 30.3
TWI12G1481 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.3e-06 58.2 217 26.7
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-06 57.8 180 26.7
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-06 57.8 180 26.7
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-06 57.8 180 26.7
Peaxi162Scf00201g01410 Petunia axillaris HOM05D007579 ORTHO05D000037 1.7e-06 57.8 182 29.1
TWI39G0385 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.7e-06 57.8 208 25.5
Lsat_1_v5_gn_5_66420 Lactuca sativa HOM05D009382 ORTHO05D000285 2.2e-06 57.4 211 25.6
Medtr2g021280 Medicago truncatula HOM05D009922 ORTHO05D000285 2.2e-06 57.4 186 27.4
TWI38G1661 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.2e-06 57.4 223 25.1
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 2.8e-06 57.0 204 24.5
Gorai.006G019900 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.8e-06 57.0 207 26.1
Psat0s2829g0240 Pisum sativum HOM05D011477 ORTHO05D000285 2.8e-06 57.0 204 26.5
Ah.03g141330 Amaranthus hybridus HOM05D000876 ORTHO05D000285 3.7e-06 56.6 254 26.8
Gorai.010G149000 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.7e-06 56.6 207 26.1
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.7e-06 56.6 219 24.2
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 4.8e-06 56.2 254 26.8
arahy.Tifrunner.gnm1.ann1.R6BV2D Arachis hypogaea HOM05D000876 ORTHO05D000285 4.8e-06 56.2 217 27.6
Medtr8g054100 Medicago truncatula HOM05D000876 ORTHO05D000285 4.8e-06 56.2 38 60.5
Psat5g073200 Pisum sativum HOM05D011477 ORTHO05D000285 4.8e-06 56.2 220 27.3
TWI75G0526 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.8e-06 56.2 39 56.4
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.3e-06 55.8 228 26.3
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 6.3e-06 55.8 206 26.2
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 6.3e-06 55.8 38 60.5
TWI53G2118 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.3e-06 55.8 220 25.9
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 8.2e-06 55.5 225 25.8
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 8.2e-06 55.5 208 27.4
Hund26464 Selenicereus undatus HOM05D000876 ORTHO05D002662 8.2e-06 55.5 39 56.4
TWI31G1090 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 8.2e-06 55.5 224 25.0


User provided reference genes

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