Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 6.0e-183 644.0 327 100.0
Nitab4.5_0008916g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 4.0e-102 375.6 245 82.4
Nitab4.5_0002418g0170 Nicotiana tabacum HOM05D009000 ORTHO05D010659 7.8e-90 334.7 246 74.8
Nitab4.5_0000172g0650 Nicotiana tabacum HOM05D009000 ORTHO05D010659 3.1e-86 322.8 305 64.6
Nitab4.5_0004100g0090 Nicotiana tabacum HOM05D009808 ORTHO05D006814 1.0e-68 264.6 182 79.7
Nitab4.5_0000844g0080 Nicotiana tabacum HOM05D009000 ORTHO05D010659 2.6e-61 240.0 139 88.5
Nitab4.5_0001152g0700 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.7e-60 237.3 152 83.6
Sopen03g010810 Solanum pennellii HOM05D009000 ORTHO05D010659 4.6e-58 229.2 187 66.3
HanXRQChr13g0388591 Helianthus annuus HOM05D009000 ORTHO05D010659 3.9e-57 226.1 182 69.8
Nitab4.5_0010223g0020 Nicotiana tabacum HOM05D009000 ORTHO05D010659 8.7e-57 224.9 136 89.0
Nitab4.5_0000886g0140 Nicotiana tabacum HOM05D009000 ORTHO05D010659 4.1e-54 216.1 140 83.6
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 1.5e-53 214.2 269 52.0
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 4.5e-53 212.6 268 51.1
Nitab4.5_0000681g0260 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.8e-49 200.7 134 81.3
Nitab4.5_0001788g0060 Nicotiana tabacum HOM05D000743 ORTHO05D000580 3.1e-46 189.9 120 85.0
Nitab4.5_0002326g0080 Nicotiana tabacum HOM05D009000 ORTHO05D010659 4.1e-46 189.5 158 69.0
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 5.9e-37 159.1 139 59.0
Nitab4.5_0007293g0090 Nicotiana tabacum HOM05D009000 ORTHO05D010659 6.5e-36 155.6 129 72.9
TPR.G35117 Trifolium pratense HOM05D009000 ORTHO05D010659 5.5e-27 125.9 177 46.3
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 9.4e-27 125.2 120 62.5
Psat4g185640 Pisum sativum HOM05D000743 ORTHO05D000580 2.8e-23 113.6 192 42.7
LjContig00315g0010124 Lotus japonicus HOM05D009000 ORTHO05D010659 4.8e-23 112.8 192 39.6
Nitab4.5_0007373g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 9.4e-19 98.6 79 68.4
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 3.0e-17 93.6 236 35.2
unitig_87.g27977 Utricularia gibba HOM05D009000 ORTHO05D010659 9.8e-16 88.6 179 36.3
LjContig00439g0013523 Lotus japonicus HOM05D009000 ORTHO05D010659 6.3e-15 85.9 129 39.5
Solyc12g021320.1 Solanum lycopersicum HOM05D009000 ORTHO05D010659 7.0e-14 82.4 76 52.6
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 4.5e-13 79.7 141 36.9
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 7.7e-13 79.0 125 41.6
Nitab4.5_0002326g0060 Nicotiana tabacum HOM05D005794 ORTHO05D006814 7.7e-13 79.0 41 95.1
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 7.7e-13 79.0 126 38.9
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 7.7e-13 79.0 126 38.9
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 1.0e-12 78.6 249 33.7
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 1.7e-12 77.8 178 35.4
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 1.7e-12 77.8 239 34.3
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.9e-12 77.0 126 38.1
Nitab4.5_0000886g0250 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.1e-11 75.1 41 90.2
SalBow1G2933 Salvia bowleyana HOM05D009000 ORTHO05D010659 7.2e-11 72.4 144 38.2
SGA_v2.0_scaffold245G44435 Striga asiatica HOM05D001987 ORTHO05D006514 7.2e-11 72.4 77 55.8
Solyc00g500102.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.2e-10 71.6 139 36.0
Solyc00g500119.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.2e-10 71.6 139 36.0
Solyc00g500276.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.2e-10 71.6 139 36.0
Solyc00g500360.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.2e-10 71.6 139 36.0
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 1.2e-10 71.6 139 36.0
Nitab4.5_0010321g0010 Nicotiana tabacum HOM05D009000 ORTHO05D010659 2.1e-10 70.9 38 92.1
FAN20G1765 Fragaria x ananassa HOM05D009000 ORTHO05D010659 3.0e-09 67.0 111 36.9
VMungo1309G3000 Vigna mungo HOM05D009000 ORTHO05D010659 8.9e-09 65.5 142 33.8
Psat7g138400 Pisum sativum HOM05D000743 ORTHO05D000580 1.2e-08 65.1 111 40.5
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 2.0e-08 64.3 142 35.9
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 7.5e-08 62.4 119 33.6
Glyma.05G092200 Glycine max HOM05D009000 ORTHO05D010659 2.2e-07 60.8 98 39.8
CAN.G27.67 Capsicum annuum HOM05D009000 ORTHO05D010659 6.4e-07 59.3 74 54.1
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 6.4e-07 59.3 83 39.8
CAN.G547.8 Capsicum annuum HOM05D009000 ORTHO05D010659 8.3e-07 58.9 144 37.5
Sopen11g018250 Solanum pennellii HOM05D015862 ORTHO05D010659 1.8e-06 57.8 142 35.9
Ca_25385_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013491 4.1e-06 56.6 111 36.9
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 9.2e-06 55.5 210 29.0
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 9.2e-06 55.5 210 29.0
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 9.2e-06 55.5 210 29.0


User provided reference genes

Program Settings