Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.4e-190 669.5 341 100.0
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 5.1e-185 651.0 341 96.5
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 7.7e-157 557.4 314 91.4
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 1.7e-156 556.2 314 91.1
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.7e-156 556.2 317 90.9
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 4.3e-155 551.6 315 90.5
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 1.6e-146 523.1 314 85.7
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 1.9e-139 499.6 322 80.7
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 4.6e-133 478.4 317 78.5
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.4e-129 466.8 316 75.3
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 5.8e-128 461.5 316 74.7
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 2.9e-127 459.1 316 75.3
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 9.2e-126 454.1 321 73.5
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 2.3e-124 449.5 317 73.2
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 5.1e-124 448.4 316 71.8
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 1.1e-123 447.2 313 73.2
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 3.1e-121 439.1 316 71.8
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 8.9e-121 437.6 318 70.4
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 7.6e-120 434.5 316 70.9
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 1.7e-119 433.3 316 69.6
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 2.2e-119 433.0 318 70.8
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 3.8e-119 432.2 316 70.6
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 4.9e-119 431.8 324 70.1
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 6.4e-119 431.4 316 70.9
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 1.1e-118 430.6 353 66.0
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.9e-118 429.9 315 70.5
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.9e-118 429.9 316 72.2
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 3.2e-118 429.1 318 70.1
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 3.2e-118 429.1 316 69.0
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 3.2e-118 429.1 316 71.5
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 3.2e-118 429.1 322 69.9
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 4.2e-118 428.7 316 71.8
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 4.2e-118 428.7 321 69.2
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 5.4e-118 428.3 316 68.7
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 9.3e-118 427.6 343 65.9
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 1.2e-117 427.2 318 69.2
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 1.2e-117 427.2 321 71.0
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 1.6e-117 426.8 321 70.4
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 1.6e-117 426.8 318 70.1
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 2.1e-117 426.4 253 83.8
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 3.5e-117 425.6 316 69.0
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 6.0e-117 424.9 316 67.4
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 6.0e-117 424.9 316 69.3
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 1.3e-116 423.7 317 67.2
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 2.3e-116 422.9 316 68.4
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 3.9e-116 422.2 317 69.4
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 6.6e-116 421.4 320 67.5
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 8.7e-116 421.0 319 67.4
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 8.7e-116 421.0 323 68.7
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 1.1e-115 420.6 317 68.1
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 2.5e-115 419.5 316 69.9
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 2.5e-115 419.5 324 69.1
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 7.3e-115 417.9 316 68.4
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 9.6e-115 417.5 316 68.4
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 9.6e-115 417.5 316 68.0
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 1.6e-114 416.8 317 66.9
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 2.1e-114 416.4 316 69.3
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.1e-114 416.4 318 69.5
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 2.8e-114 416.0 317 66.6
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 4.8e-114 415.2 316 66.5
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 4.8e-114 415.2 255 80.4
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 8.1e-114 414.5 316 69.9
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 1.8e-113 413.3 317 67.8
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 4.0e-113 412.1 319 66.5
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 4.0e-113 412.1 316 67.1
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 5.3e-113 411.8 316 66.5
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 1.5e-112 410.2 316 66.8
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 1.5e-112 410.2 322 67.7
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 2.0e-112 409.8 316 66.8
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 2.0e-112 409.8 343 63.8
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 2.6e-112 409.5 316 66.8
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 3.4e-112 409.1 316 67.1
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 7.6e-112 407.9 322 67.4
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 7.6e-112 407.9 319 66.1
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 9.9e-112 407.5 319 65.2
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 1.7e-111 406.8 315 67.3
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 2.9e-111 406.0 316 65.8
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 4.9e-111 405.2 316 66.1
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 8.4e-111 404.4 318 66.7
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.1e-110 404.1 319 65.2
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.1e-110 404.1 322 67.4
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 3.2e-110 402.5 318 66.4
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 3.2e-110 402.5 318 66.4
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 3.2e-110 402.5 317 65.6
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 2.1e-109 399.8 324 65.4
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.7e-109 399.4 322 65.2
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.5e-109 399.1 324 65.7
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 4.6e-109 398.7 322 64.9
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 6.0e-109 398.3 317 66.9
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.0e-108 397.5 324 65.4
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.7e-108 396.7 323 65.6
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 2.3e-108 396.4 319 66.8
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 3.9e-108 395.6 323 64.7
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 5.1e-108 395.2 318 65.7
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 2.5e-107 392.9 316 65.5
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 5.6e-107 391.7 319 66.1
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.6e-106 390.2 316 64.2
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 8.1e-106 387.9 322 65.2
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 9.9e-104 380.9 325 61.8
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 4.9e-103 378.6 290 66.9
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 8.4e-103 377.9 255 73.3
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 5.5e-102 375.2 257 72.4
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 1.1e-99 367.5 321 61.4
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.5e-99 367.1 253 72.7
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 9.6e-99 364.4 374 52.9
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 2.0e-96 356.7 316 61.7
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 1.2e-93 347.4 499 43.9
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 1.0e-79 301.2 260 58.5
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.9e-79 299.7 184 82.6
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-78 296.2 192 78.6
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 3.0e-76 289.7 175 83.4
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 6.7e-76 288.5 250 56.8
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 1.1e-73 281.2 160 86.9
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 4.1e-73 279.3 160 86.9
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.0e-71 274.6 168 82.7
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 3.8e-71 272.7 168 80.4
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.8e-60 237.3 211 57.3
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 8.0e-53 211.8 188 59.0
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.7e-48 196.8 257 46.7
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 2.2e-47 193.7 115 85.2
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 9.5e-46 188.3 141 63.8
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 6.1e-45 185.7 111 83.8
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.7e-42 177.6 111 80.2
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 4.5e-40 169.5 112 75.0
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.0e-39 166.0 105 79.0
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 8.3e-34 148.7 111 73.0
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.4e-33 147.9 95 81.1
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.7e-31 141.0 152 50.7
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 1.5e-22 111.3 73 79.5
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 9.9e-19 98.6 141 46.1
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 1.2e-11 75.1 159 32.1
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 9.9e-11 72.0 55 61.8
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.3e-10 71.6 144 34.0
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 3.8e-10 70.1 160 31.9
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 8.4e-10 68.9 173 28.3
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 6.0e-08 62.8 71 54.9
Cre12.g552600 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.9e-06 57.8 144 29.2
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 2.5e-06 57.4 185 28.1
PRCOL_00003044 Prasinoderma coloniale HOM05D024924 ORTHO05D006483 4.3e-06 56.6 151 29.1
Cre09.g386756 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 7.3e-06 55.8 180 27.2


User provided reference genes

Program Settings