Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014068g0010 Nicotiana tabacum HOM05D001158 ORTHO05D000964 6.6e-30 133.3 62 100.0
Solyc04g011540.4 Solanum lycopersicum HOM05D001158 ORTHO05D000964 4.7e-20 100.5 106 50.0
Sopen04g005720 Solanum pennellii HOM05D001158 ORTHO05D000964 6.8e-19 96.7 106 49.1
Peaxi162Scf00658g00838 Petunia axillaris HOM05D001158 ORTHO05D000964 1.5e-18 95.5 106 48.1
Peaxi162Scf00760g00325 Petunia axillaris HOM05D001158 ORTHO05D000964 1.5e-18 95.5 106 48.1
PGSC0003DMG400027742 Solanum tuberosum HOM05D001158 ORTHO05D000964 3.4e-18 94.4 107 49.5
Nitab4.5_0013552g0030 Nicotiana tabacum HOM05D001158 ORTHO05D000964 6.4e-17 90.1 99 51.5
Cc02_g07750 Coffea canephora HOM05D001158 ORTHO05D000964 7.0e-16 86.7 106 44.3
Dinv26024 Davidia involucrata HOM05D001158 ORTHO05D000964 7.8e-15 83.2 106 42.5
CiPaw.02G184700 Carya illinoinensis HOM05D001158 ORTHO05D000964 3.0e-14 81.3 106 40.6
Haze_17075 Corylus avellana HOM05D001158 ORTHO05D000964 5.0e-14 80.5 105 41.9
Dinv03041 Davidia involucrata HOM05D001158 ORTHO05D000964 8.6e-14 79.7 106 41.5
Cfa001467 Carpinus fangiana HOM05D001158 ORTHO05D000964 1.5e-13 79.0 105 41.0
CiPaw.01G288200 Carya illinoinensis HOM05D001158 ORTHO05D000964 3.3e-13 77.8 105 41.0
CANSAT56G0809 Cannabis sativa HOM05D001158 ORTHO05D000964 4.3e-13 77.4 105 40.0
MD07G1199800 Malus domestica HOM05D001158 ORTHO05D000964 5.6e-13 77.0 106 41.5
CAN.G786.7 Capsicum annuum HOM05D001158 ORTHO05D000964 9.5e-13 76.3 91 45.1
DCAR_011712 Daucus carota HOM05D001158 ORTHO05D000964 1.2e-12 75.9 106 39.6
HanXRQChr07g0201291 Helianthus annuus HOM05D001158 ORTHO05D000964 1.2e-12 75.9 106 38.7
Aqoxy4G02888 Aquilegia oxysepala HOM05D001158 ORTHO05D000964 1.6e-12 75.5 106 37.7
Eucgr.J00003 Eucalyptus grandis HOM05D001158 ORTHO05D000964 1.6e-12 75.5 106 41.5
GSVIVG01016533001 Vitis vinifera HOM05D001158 ORTHO05D000964 1.6e-12 75.5 106 37.7
Gohir.A10G220100 Gossypium hirsutum HOM05D001158 ORTHO05D000964 3.6e-12 74.3 105 40.0
Prupe.2G236500 Prunus persica HOM05D001158 ORTHO05D000964 3.6e-12 74.3 106 41.5
vmacro07177 Vaccinium macrocarpon HOM05D001158 ORTHO05D000964 3.6e-12 74.3 107 37.4
Gohir.D10G229600 Gossypium hirsutum HOM05D001158 ORTHO05D000964 6.2e-12 73.6 105 39.0
Gohir.D10G230000 Gossypium hirsutum HOM05D001158 ORTHO05D000964 6.2e-12 73.6 105 39.0
Gorai.011G262100 Gossypium raimondii HOM05D001158 ORTHO05D000964 6.2e-12 73.6 105 39.0
Gorai.011G262500 Gossypium raimondii HOM05D001158 ORTHO05D000964 6.2e-12 73.6 105 39.0
COL.COLO4_15057 Corchorus olitorius HOM05D001158 ORTHO05D000964 1.1e-11 72.8 105 39.0
PSO339G3661 Papaver somniferum HOM05D001158 ORTHO05D000964 1.1e-11 72.8 109 39.4
QL08p059642 Quercus lobata HOM05D001158 ORTHO05D000964 2.3e-11 71.6 105 40.0
HanXRQChr07g0201321 Helianthus annuus HOM05D001158 ORTHO05D000964 3.1e-11 71.2 106 37.7
PSO384G1026 Papaver somniferum HOM05D001158 ORTHO05D000964 3.1e-11 71.2 109 38.5
Actinidia02942 Actinidia chinensis HOM05D000370 ORTHO05D001366 4.0e-11 70.9 106 36.8
MD01G1135100 Malus domestica HOM05D001158 ORTHO05D000964 5.2e-11 70.5 106 39.6
Nitab4.5_0010166g0030 Nicotiana tabacum HOM05D001158 ORTHO05D000964 5.2e-11 70.5 90 46.7
CANSAT56G1341 Cannabis sativa HOM05D001158 ORTHO05D000964 1.2e-10 69.3 105 38.1
CANSAT56G3988 Cannabis sativa HOM05D001158 ORTHO05D000964 1.2e-10 69.3 105 38.1
HanXRQChr07g0201311 Helianthus annuus HOM05D001158 ORTHO05D000964 1.2e-10 69.3 107 37.4
Hma1.2p1_0953F.1_g241140 Hydrangea macrophylla HOM05D001158 ORTHO05D000964 1.5e-10 68.9 106 35.8
MBI05_g28391_MAGBIO Magnolia biondii HOM05D001158 ORTHO05D000964 1.5e-10 68.9 106 38.7
PSO339G3324 Papaver somniferum HOM05D001158 ORTHO05D000964 1.5e-10 68.9 109 37.6
Potri.010G203000 Populus trichocarpa HOM05D001158 ORTHO05D000964 1.5e-10 68.9 105 38.1
ECA238G1861 Erigeron canadensis HOM05D001158 ORTHO05D000964 2.0e-10 68.6 106 35.8
Lsat_1_v5_gn_2_119280 Lactuca sativa HOM05D000370 ORTHO05D001366 2.0e-10 68.6 106 36.8
Glyma.02G247900 Glycine max HOM05D001158 ORTHO05D000964 2.6e-10 68.2 105 37.1
Phvul.008G232800 Phaseolus vulgaris HOM05D001158 ORTHO05D000964 3.4e-10 67.8 105 37.1
Sabra15G0062800 Salix brachista HOM05D001158 ORTHO05D000964 4.4e-10 67.4 105 37.1
TPR.G3507 Trifolium pratense HOM05D001158 ORTHO05D000964 5.8e-10 67.0 105 36.2
Atru.chr12.435 Acer truncatum HOM05D000370 ORTHO05D001366 7.5e-10 66.6 103 35.9
ClCG09G019700 Citrullus lanatus HOM05D001158 ORTHO05D000964 7.5e-10 66.6 105 36.2
RcHm_v2.0_Chr1g0367731 Rosa chinensis HOM05D001158 ORTHO05D000964 7.5e-10 66.6 104 35.6
MELO3C021622.2 Cucumis melo HOM05D001158 ORTHO05D000964 9.8e-10 66.2 105 35.2
Glyma.18G038400 Glycine max HOM05D001158 ORTHO05D000964 9.8e-10 66.2 104 35.6
PSO384G0672 Papaver somniferum HOM05D001158 ORTHO05D000964 9.8e-10 66.2 108 36.1
VMungo0647G2054 Vigna mungo HOM05D001158 ORTHO05D000964 9.8e-10 66.2 105 36.2
Sed0001831 Sechium edule HOM05D001158 ORTHO05D000964 1.3e-09 65.9 105 35.2
Sabra08G0041200 Salix brachista HOM05D001158 ORTHO05D000964 1.7e-09 65.5 105 36.2
CsaV3_5G026720 Cucumis sativus L. HOM05D001158 ORTHO05D000964 2.2e-09 65.1 105 36.2
Lalb_Chr17g0346211 Lupinus albus HOM05D001158 ORTHO05D000964 2.2e-09 65.1 105 34.3
VMungo0647G1461 Vigna mungo HOM05D001158 ORTHO05D000964 2.2e-09 65.1 105 35.2
CsaV3_5G026730 Cucumis sativus L. HOM05D000370 ORTHO05D001366 2.9e-09 64.7 105 36.2
Glyma.11G219000 Glycine max HOM05D001158 ORTHO05D000964 3.7e-09 64.3 104 33.7
ATR0680G051 Amborella trichopoda HOM05D001158 ORTHO05D000964 4.9e-09 63.9 96 38.5
Duzib114G0179 Durio zibethinus HOM05D001158 ORTHO05D000964 4.9e-09 63.9 109 35.8
LjContig00141g0001022 Lotus japonicus HOM05D001158 ORTHO05D000964 4.9e-09 63.9 104 36.5
Medtr5g079880 Medicago truncatula HOM05D001158 ORTHO05D000964 4.9e-09 63.9 105 34.3
ATR0680G245 Amborella trichopoda HOM05D001158 ORTHO05D000964 6.4e-09 63.5 96 38.5
Phvul.008G232700 Phaseolus vulgaris HOM05D001158 ORTHO05D000964 6.4e-09 63.5 105 34.3
arahy.Tifrunner.gnm1.ann1.LPK9E2 Arachis hypogaea HOM05D001158 ORTHO05D000964 8.3e-09 63.2 107 32.7
arahy.Tifrunner.gnm1.ann1.WV03GU Arachis hypogaea HOM05D001158 ORTHO05D000964 8.3e-09 63.2 107 32.7
Sabra10G0156700 Salix brachista HOM05D001158 ORTHO05D000964 8.3e-09 63.2 105 35.2
Lalb_Chr10g0104551 Lupinus albus HOM05D001158 ORTHO05D000964 1.1e-08 62.8 105 34.3
Lalb_Chr17g0346221 Lupinus albus HOM05D001158 ORTHO05D000964 1.1e-08 62.8 106 34.0
CANSAT56G0861 Cannabis sativa HOM05D001158 ORTHO05D000964 1.4e-08 62.4 105 35.2
CANSAT56G2755 Cannabis sativa HOM05D001158 ORTHO05D000964 1.4e-08 62.4 105 35.2
Ciclev10032979m.g Citrus clementina HOM05D001158 ORTHO05D000964 1.4e-08 62.4 105 37.1
FvH4_7g22610 Fragaria vesca HOM05D001158 ORTHO05D000964 1.4e-08 62.4 105 33.3
FAN01G1962 Fragaria x ananassa HOM05D001158 ORTHO05D000964 1.4e-08 62.4 105 33.3
FAN01G3010 Fragaria x ananassa HOM05D001158 ORTHO05D000964 1.4e-08 62.4 105 33.3
FAN03G0977 Fragaria x ananassa HOM05D001158 ORTHO05D000964 1.4e-08 62.4 105 33.3
FAN06G3401 Fragaria x ananassa HOM05D001158 ORTHO05D000964 1.4e-08 62.4 105 33.3
PGR044G0934 Punica granatum HOM05D001158 ORTHO05D000964 1.4e-08 62.4 104 32.7
Sabra10G0156600 Salix brachista HOM05D000370 ORTHO05D001366 1.4e-08 62.4 105 36.2
Glyma.02G248000 Glycine max HOM05D001158 ORTHO05D000964 1.9e-08 62.0 104 33.7
DCAR_027610 Daucus carota HOM05D001158 ORTHO05D000964 3.2e-08 61.2 106 34.0
FAN03G2312 Fragaria x ananassa HOM05D001158 ORTHO05D000964 3.2e-08 61.2 105 32.4
Manes.07G116900 Manihot esculenta HOM05D001158 ORTHO05D000964 3.2e-08 61.2 105 32.4
AUR62012096 Chenopodium quinoa HOM05D001158 ORTHO05D000964 4.1e-08 60.8 105 31.4
AUR62039370 Chenopodium quinoa HOM05D001158 ORTHO05D000964 4.1e-08 60.8 105 31.4
Glyma.02G248100 Glycine max HOM05D001158 ORTHO05D000964 4.1e-08 60.8 105 33.3
PSO384G0441 Papaver somniferum HOM05D001158 ORTHO05D000964 4.1e-08 60.8 107 34.6
Lj8C83G14 Lonicera japonica HOM05D000370 ORTHO05D001366 5.4e-08 60.5 91 37.4
RhsimUnG0042000 Rhododendron simsii HOM05D001158 ORTHO05D000964 5.4e-08 60.5 31 80.6
Atru.chr12.438 Acer truncatum HOM05D001158 ORTHO05D000964 7.1e-08 60.1 105 34.3
EL10Ac2g04739 Beta vulgaris HOM05D001158 ORTHO05D000964 7.1e-08 60.1 81 42.0
Oeu048240.1 Olea europaea HOM05D001158 ORTHO05D000964 7.1e-08 60.1 105 33.3
PSO339G3820 Papaver somniferum HOM05D001158 ORTHO05D000964 7.1e-08 60.1 107 34.6
SEGI_00426 Sequoiadendron giganteum HOM05D001158 ORTHO05D000964 7.1e-08 60.1 96 36.5
MELO3C021623.2 Cucumis melo HOM05D001158 ORTHO05D000964 9.2e-08 59.7 105 33.3
Glyma.14G068400 Glycine max HOM05D001158 ORTHO05D000964 9.2e-08 59.7 104 32.7
Lsat_1_v5_gn_2_119260 Lactuca sativa HOM05D001158 ORTHO05D000964 9.2e-08 59.7 107 33.6
VMungo0647G0930 Vigna mungo HOM05D001158 ORTHO05D000964 9.2e-08 59.7 104 32.7
Potri.010G203100 Populus trichocarpa HOM05D001158 ORTHO05D000964 1.2e-07 59.3 105 33.3
Nn1g01415 Nelumbo nucifera HOM05D001158 ORTHO05D000964 2.7e-07 58.2 92 38.0
Psat2g041560 Pisum sativum HOM05D001158 ORTHO05D000964 2.7e-07 58.2 105 33.3
Ca_05893_v3 Cicer arietinum L. HOM05D001158 ORTHO05D000964 3.5e-07 57.8 105 34.3
Nn6g33545 Nelumbo nucifera HOM05D001158 ORTHO05D000964 3.5e-07 57.8 90 40.0
Sed0015047 Sechium edule HOM05D001158 ORTHO05D000964 3.5e-07 57.8 105 32.4
HPP92_019354 Vanilla planifolia HOM05D001158 ORTHO05D000964 3.5e-07 57.8 107 33.6
Atru.chr5.435 Acer truncatum HOM05D001158 ORTHO05D000964 4.6e-07 57.4 92 41.3
Atru.chr8.370 Acer truncatum HOM05D001158 ORTHO05D000964 4.6e-07 57.4 92 41.3
QL05p059673 Quercus lobata HOM05D001158 ORTHO05D000964 4.6e-07 57.4 32 75.0
Phvul.008G232600 Phaseolus vulgaris HOM05D001158 ORTHO05D000964 6.0e-07 57.0 104 31.7
Psat2g041360 Pisum sativum HOM05D001158 ORTHO05D000964 6.0e-07 57.0 106 33.0
MSTRG.27371 Avicennia marina HOM05D001158 ORTHO05D000964 7.8e-07 56.6 122 32.0
Peaxi162Scf00233g01013 Petunia axillaris HOM05D001158 ORTHO05D000964 7.8e-07 56.6 95 35.8
QL08p050047 Quercus lobata HOM05D001158 ORTHO05D000964 7.8e-07 56.6 92 38.0
MD01G1048900 Malus domestica HOM05D001158 ORTHO05D000964 1.0e-06 56.2 96 33.3
Solyc08g080680.4 Solanum lycopersicum HOM05D001158 ORTHO05D000964 1.0e-06 56.2 96 36.5
Sopen08g028990 Solanum pennellii HOM05D001158 ORTHO05D000964 1.0e-06 56.2 96 36.5
SEGI_24227 Sequoiadendron giganteum HOM05D001158 ORTHO05D000964 1.3e-06 55.8 96 34.4
Thecc.10G040600 Theobroma cacao HOM05D001158 ORTHO05D000964 1.3e-06 55.8 31 77.4
DCAR_008414 Daucus carota HOM05D001158 ORTHO05D000964 1.7e-06 55.5 96 37.5
MBI17_g21050_MAGBIO Magnolia biondii HOM05D001158 ORTHO05D000964 1.7e-06 55.5 92 37.0
Os02g0640000 Oryza sativa ssp. japonica HOM05D001158 ORTHO05D000964 1.7e-06 55.5 96 36.5
TAR629G2983 Trochodendron aralioides HOM05D001158 ORTHO05D000964 1.7e-06 55.5 92 38.0
FAN08G0932 Fragaria x ananassa HOM05D001158 ORTHO05D000964 2.3e-06 55.1 96 37.5
Glyma.05G204900 Glycine max HOM05D001158 ORTHO05D000964 2.3e-06 55.1 92 37.0
Glyma.08G011900 Glycine max HOM05D001158 ORTHO05D000964 2.3e-06 55.1 92 37.0
Oeu048239.1 Olea europaea HOM05D001158 ORTHO05D000964 2.3e-06 55.1 105 31.4
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 2.3e-06 55.1 97 33.0
QL08p049802 Quercus lobata HOM05D001158 ORTHO05D000964 3.0e-06 54.7 90 37.8
Atru.chr12.437 Acer truncatum HOM05D001158 ORTHO05D000964 3.9e-06 54.3 105 31.4
Nn2g11124 Nelumbo nucifera HOM05D001158 ORTHO05D000964 3.9e-06 54.3 106 31.1
PSO541G1198 Papaver somniferum HOM05D001158 ORTHO05D000964 5.1e-06 53.9 109 30.3
Zm00001eb185780 Zea mays HOM05D001158 ORTHO05D000964 5.1e-06 53.9 96 36.5
FvH4_7g13490 Fragaria vesca HOM05D001158 ORTHO05D000964 8.6e-06 53.1 96 36.5
FAN01G0761 Fragaria x ananassa HOM05D001158 ORTHO05D000964 8.6e-06 53.1 96 36.5
FAN10G0809 Fragaria x ananassa HOM05D001158 ORTHO05D000964 8.6e-06 53.1 96 36.5
FAN10G2554 Fragaria x ananassa HOM05D001158 ORTHO05D000964 8.6e-06 53.1 96 36.5
GSVIVG01019850001 Vitis vinifera HOM05D001158 ORTHO05D000964 8.6e-06 53.1 91 38.5


User provided reference genes

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