Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014067g0010 Nicotiana tabacum HOM05D008837 ORTHO05D006961 3.0e-80 302.0 176 100.0
Peaxi162Scf00300g00087 Petunia axillaris HOM05D008837 ORTHO05D006961 1.0e-35 154.1 178 64.0
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.3e-35 153.7 176 53.4
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 4.0e-32 142.1 94 76.6
Nitab4.5_0000319g0090 Nicotiana tabacum HOM05D008837 ORTHO05D006961 6.9e-24 114.8 176 51.1
Nitab4.5_0000319g0160 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.4e-21 107.1 95 69.5
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 5.4e-21 105.1 99 61.6
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 3.0e-19 99.4 96 57.3
Nitab4.5_0000319g0100 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.1e-18 97.4 79 72.2
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 9.0e-16 87.8 94 54.3
Sopen03g022070 Solanum pennellii HOM05D008837 ORTHO05D006961 1.5e-15 87.0 99 56.6
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 5.8e-15 85.1 97 51.5
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 5.8e-15 85.1 94 53.2
Nitab4.5_0005040g0040 Nicotiana tabacum HOM05D008837 ORTHO05D006961 7.6e-15 84.7 85 78.8
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.3e-14 84.0 204 34.3
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.3e-14 84.0 94 56.4
Peaxi162Scf00300g00088 Petunia axillaris HOM05D008837 ORTHO05D006961 1.7e-14 83.6 96 66.7
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 9.6e-10 67.8 100 43.0
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 9.6e-10 67.8 94 42.6
Sopen03g022090 Solanum pennellii HOM05D008837 ORTHO05D006961 2.1e-09 66.6 67 67.2
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 1.8e-08 63.5 95 44.2
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 3.1e-08 62.8 94 40.4
Solyc03g082370.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 3.1e-08 62.8 65 64.6
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 4.5e-07 58.9 110 37.3
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 4.5e-07 58.9 101 40.6
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 4.5e-07 58.9 95 41.1
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 7.6e-07 58.2 94 36.2
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 1.3e-06 57.4 97 42.3
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.7e-06 57.0 94 42.6
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 1.7e-06 57.0 102 36.3
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 2.2e-06 56.6 94 38.3
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 2.9e-06 56.2 102 40.2
Cfa016165 Carpinus fangiana HOM05D001784 ORTHO05D001699 6.4e-06 55.1 93 37.6
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 6.4e-06 55.1 97 41.2
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 6.4e-06 55.1 93 39.8
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 8.4e-06 54.7 107 35.5


User provided reference genes

Program Settings