Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 0.0e+00 1265.8 648 100.0
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 0.0e+00 1171.0 693 89.2
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 0.0e+00 1088.6 651 86.9
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 5.9e-307 1057.0 652 85.1
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 9.8e-302 1039.6 654 83.8
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 8.9e-279 963.4 651 79.7
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 7.6e-238 827.4 642 67.4
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 1.3e-237 826.6 665 65.9
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 3.8e-237 825.1 658 66.7
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 4.6e-235 818.1 659 68.1
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 1.1e-233 813.5 658 65.8
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 2.5e-233 812.4 533 80.9
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 7.4e-233 810.8 667 65.7
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.7e-232 808.5 658 66.4
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 6.3e-232 807.7 679 66.0
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 6.5e-229 797.7 659 65.1
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 9.3e-228 793.9 656 64.6
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 1.1e-225 786.9 656 64.6
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 1.9e-225 786.2 666 65.5
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 4.8e-224 781.6 653 64.6
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 8.2e-224 780.8 654 65.3
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 5.3e-223 778.1 645 65.4
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 1.2e-222 776.9 657 64.7
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 1.5e-222 776.5 631 65.3
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 2.0e-222 776.2 661 63.2
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 3.4e-222 775.4 649 66.3
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 4.5e-222 775.0 658 63.1
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 5.0e-221 771.5 642 62.9
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 8.5e-221 770.8 634 64.5
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 4.2e-220 768.5 659 64.2
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 9.4e-220 767.3 658 63.1
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 2.3e-218 762.7 663 63.0
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 8.8e-218 760.8 647 64.1
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 4.4e-217 758.4 653 63.7
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 2.8e-216 755.7 666 60.8
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 4.8e-216 755.0 656 61.1
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 4.8e-216 755.0 638 62.9
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 1.1e-215 753.8 652 61.7
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 1.4e-215 753.4 636 64.6
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 2.6e-214 749.2 657 62.4
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 2.6e-214 749.2 657 62.4
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 1.7e-213 746.5 660 63.0
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 2.2e-213 746.1 654 61.9
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 5.0e-213 745.0 669 61.4
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 1.1e-212 743.8 629 62.8
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 1.1e-212 743.8 654 62.5
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 4.2e-212 741.9 659 62.7
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 2.7e-211 739.2 662 61.0
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 6.1e-211 738.0 641 61.5
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 2.3e-210 736.1 653 61.6
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 3.0e-210 735.7 636 61.8
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 5.2e-210 734.9 658 60.2
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 8.8e-210 734.2 655 62.0
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 2.6e-209 732.6 646 60.5
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 1.3e-208 730.3 662 60.3
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 2.4e-207 726.1 642 62.3
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 7.7e-206 721.1 643 60.8
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 1.3e-205 720.3 661 59.5
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 3.8e-205 718.8 651 60.5
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.9e-204 716.5 599 62.8
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 2.5e-204 716.1 654 60.9
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 2.5e-204 716.1 660 59.8
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 3.2e-204 715.7 650 60.0
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 9.4e-204 714.1 650 60.6
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 4.0e-202 708.8 622 63.3
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 2.2e-200 703.0 665 58.0
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 4.5e-198 695.3 655 58.8
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 5.9e-198 694.9 650 58.6
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 2.9e-197 692.6 655 58.9
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 7.2e-196 688.0 652 58.1
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 9.4e-196 687.6 654 58.3
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 9.4e-196 687.6 584 63.7
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 1.2e-195 687.2 676 57.1
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 2.1e-195 686.4 657 58.8
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 2.1e-195 686.4 656 59.0
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 1.0e-194 684.1 668 56.3
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 1.4e-194 683.7 648 57.7
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 6.8e-194 681.4 569 65.0
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 9.8e-193 677.6 643 58.6
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 1.6e-190 670.2 654 57.3
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 5.9e-190 668.3 647 57.8
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 1.0e-189 667.5 647 57.8
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 2.6e-185 652.9 651 56.1
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 2.8e-184 649.4 652 56.4
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 1.6e-182 643.7 493 68.0
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 5.0e-181 638.6 638 54.9
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 8.9e-178 627.9 543 60.4
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 1.6e-174 617.1 533 63.0
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 3.4e-169 599.4 498 62.7
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 4.4e-169 599.0 501 63.9
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 1.3e-168 597.4 685 50.8
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 9.2e-167 591.3 658 50.6
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 1.5e-164 583.9 653 49.8
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 4.9e-160 568.9 596 55.5
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 2.1e-155 553.5 689 46.7
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 2.7e-150 536.6 538 54.5
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 7.8e-142 508.4 487 58.3
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 8.7e-133 478.4 513 53.8
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 5.3e-130 469.2 440 60.7
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 2.6e-129 466.8 632 44.6
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 4.8e-123 446.0 442 63.1
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 2.2e-115 420.6 747 37.5
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 1.6e-110 404.4 684 38.6
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 7.9e-102 375.6 383 60.1
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 3.3e-100 370.2 291 72.2
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 1.2e-97 361.7 278 65.8
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 1.3e-96 358.2 291 70.8
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.9e-95 354.4 337 60.2
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 7.2e-95 352.4 564 40.6
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 3.6e-94 350.1 340 56.2
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 2.5e-87 327.4 637 35.6
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 2.0e-81 307.8 286 59.8
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 2.5e-79 300.8 206 78.6
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 2.2e-75 287.7 495 37.6
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.6e-70 271.6 325 48.6
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 4.4e-60 236.9 175 69.1
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 7.0e-58 229.6 382 39.8
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 1.2e-57 228.8 193 64.2
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 6.6e-56 223.0 381 44.1
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.6e-46 191.8 151 62.3
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.8e-45 188.3 155 63.2
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 2.4e-37 161.4 685 28.8
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 5.2e-37 160.2 329 32.8
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 1.2e-33 149.1 106 62.3
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 3.6e-30 137.5 179 48.0
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 5.1e-16 90.5 119 46.2
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 2.5e-15 88.2 63 66.7
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 3.3e-15 87.8 68 70.6
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 1.3e-14 85.9 109 47.7
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.6e-14 85.5 86 51.2
TPR.G25795 Trifolium pratense HOM05D005709 ORTHO05D006306 3.1e-13 81.3 63 61.9
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 6.9e-13 80.1 53 67.9
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 1.2e-12 79.3 109 45.0
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 1.2e-12 79.3 98 50.0
SMO162G0006 Selaginella moellendorffii HOM05D000981 ORTHO05D006306 4.5e-12 77.4 160 36.2
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 7.6e-12 76.6 53 71.7


User provided reference genes

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