Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 4.9e-57 224.2 107 100.0
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 3.3e-37 158.3 108 74.1
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 4.3e-37 157.9 106 70.8
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 1.2e-36 156.4 99 76.8
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 3.4e-34 148.3 105 70.5
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 4.4e-34 147.9 105 66.7
Nitab4.5_0004867g0050 Nicotiana tabacum HOM05D007970 ORTHO05D009943 9.0e-27 123.6 71 90.1
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 3.8e-25 118.2 92 65.2
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 9.3e-24 113.6 101 58.4
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 2.1e-23 112.5 88 69.3
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 1.0e-22 110.2 113 57.5
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 3.9e-22 108.2 85 61.2
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 5.1e-22 107.8 110 54.5
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.7e-22 107.5 115 53.9
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.3e-21 104.8 113 53.1
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 7.4e-21 104.0 89 61.8
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 3.7e-20 101.7 106 50.9
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 6.2e-20 100.9 62 72.6
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.1e-19 100.1 80 62.5
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 2.4e-19 99.0 62 71.0
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 9.0e-19 97.1 87 54.0
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 1.2e-18 96.7 116 48.3
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 2.0e-18 95.9 89 58.4
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 2.6e-18 95.5 85 56.5
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 2.6e-18 95.5 80 60.0
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 1.3e-17 93.2 83 57.8
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.7e-17 92.8 73 64.4
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 1.7e-17 92.8 108 43.5
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 8.4e-17 90.5 92 53.3
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 1.1e-16 90.1 89 52.8
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 3.2e-16 88.6 111 46.8
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 3.2e-16 88.6 109 42.2
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 7.1e-16 87.4 103 46.6
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 1.6e-15 86.3 76 57.9
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.7e-15 85.5 91 47.3
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 4.6e-15 84.7 88 52.3
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 6.0e-15 84.3 92 50.0
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 7.9e-15 84.0 91 47.3
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 7.9e-15 84.0 91 47.3
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 1.3e-14 83.2 88 58.0
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 2.3e-14 82.4 74 52.7
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.3e-14 82.4 74 52.7
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 2.3e-14 82.4 91 49.5
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 3.0e-14 82.0 90 53.3
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 3.9e-14 81.6 92 50.0
Peaxi162Scf00373g00094 Petunia axillaris HOM05D007970 ORTHO05D009943 3.9e-14 81.6 47 76.6
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 5.1e-14 81.3 89 48.3
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 5.1e-14 81.3 90 50.0
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 6.7e-14 80.9 76 51.3
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 6.7e-14 80.9 80 51.2
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 7.4e-13 77.4 104 46.2
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 2.1e-12 75.9 84 47.6
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.8e-12 75.5 80 50.0
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.7e-12 75.1 80 51.2
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 3.7e-12 75.1 80 51.2
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 2.4e-11 72.4 90 48.9
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 3.1e-11 72.0 109 45.0
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 6.9e-11 70.9 101 39.6
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 9.0e-11 70.5 101 39.6
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.5e-10 69.7 92 40.2
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 2.0e-10 69.3 70 55.7
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 2.0e-10 69.3 109 42.2
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 4.5e-10 68.2 88 47.7
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 6.5e-09 64.3 96 44.8
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 1.4e-08 63.2 93 40.9
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 1.4e-08 63.2 93 40.9
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.4e-08 63.2 59 52.5
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 2.5e-08 62.4 119 36.1
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.5e-08 62.4 83 45.8
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.5e-08 62.4 83 45.8
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 2.5e-08 62.4 57 56.1
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 4.2e-08 61.6 57 54.4
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 2.1e-07 59.3 58 51.7
CDE02G4309 Ceratophyllum demersum HOM05D006872 ORTHO05D006261 3.5e-07 58.5 82 41.5
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 3.5e-07 58.5 80 43.8
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 1.0e-06 57.0 78 42.3
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 2.3e-06 55.8 56 51.8
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 2.3e-06 55.8 52 55.8
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 3.0e-06 55.5 56 51.8
Glyma.03G200500 Glycine max HOM05D006872 ORTHO05D006261 5.1e-06 54.7 74 40.5
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 5.1e-06 54.7 66 47.0
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 6.7e-06 54.3 48 52.1


User provided reference genes

Program Settings