Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013560g0040 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.2e-115 419.9 205 100.0
Nitab4.5_0010333g0110 Nicotiana tabacum HOM05D011968 ORTHO05D014241 5.1e-87 324.7 182 89.0
Nitab4.5_0004300g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.5e-75 286.6 204 74.0
Nitab4.5_0000866g0220 Nicotiana tabacum HOM05D011968 ORTHO05D014241 8.1e-69 264.2 152 86.8
Nitab4.5_0005831g0080 Nicotiana tabacum HOM05D011968 ORTHO05D014241 6.7e-63 244.6 198 69.2
Nitab4.5_0012599g0070 Nicotiana tabacum HOM05D011968 ORTHO05D014241 5.9e-59 231.5 182 69.2
Nitab4.5_0002093g0160 Nicotiana tabacum HOM05D011968 ORTHO05D014241 2.4e-52 209.5 182 63.7
Nitab4.5_0000085g0170 Nicotiana tabacum HOM05D011968 ORTHO05D014241 7.7e-43 177.9 182 56.0
Nitab4.5_0010586g0020 Nicotiana tabacum HOM05D011968 ORTHO05D014241 8.5e-42 174.5 133 72.2
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 1.2e-19 100.9 161 42.2
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.2e-19 100.9 154 44.2
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 4.5e-19 99.0 137 47.4
MBI03_g45449_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 7.7e-19 98.2 221 40.3
Nitab4.5_0000844g0150 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.3e-18 97.4 128 46.1
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.3e-18 96.7 167 41.9
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 8.6e-18 94.7 154 42.2
Nitab4.5_0000819g0040 Nicotiana tabacum HOM05D002921 ORTHO05D003258 1.5e-17 94.0 53 81.1
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.5e-17 94.0 154 42.2
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.2e-17 92.8 154 42.2
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 9.5e-17 91.3 134 46.3
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 9.5e-17 91.3 134 46.3
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 9.5e-17 91.3 134 46.3
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 9.5e-17 91.3 134 46.3
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 9.5e-17 91.3 134 46.3
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 9.5e-17 91.3 134 46.3
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 2.8e-16 89.7 149 39.6
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 6.1e-16 88.6 137 42.3
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 8.0e-16 88.2 154 39.6
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.0e-15 87.8 151 41.7
MBI05_g23324_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 3.0e-15 86.3 103 52.4
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 5.2e-15 85.5 136 38.2
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 1.2e-14 84.3 79 62.0
Nitab4.5_0000172g0790 Nicotiana tabacum HOM05D011968 ORTHO05D014241 9.8e-14 81.3 64 68.8
CAN.G72.10 Capsicum annuum HOM05D002660 ORTHO05D003902 2.2e-13 80.1 126 41.3
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 2.8e-13 79.7 130 43.1
CAN.G999.39 Capsicum annuum HOM05D002660 ORTHO05D003902 4.9e-13 79.0 119 44.5
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 6.3e-13 78.6 126 41.3
CAN.G26.9 Capsicum annuum HOM05D002660 ORTHO05D003902 8.3e-13 78.2 134 41.0
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 1.8e-12 77.0 153 37.3
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 1.8e-12 77.0 153 37.3
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 1.8e-12 77.0 153 37.3
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 1.8e-12 77.0 153 37.9
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 2.4e-12 76.6 153 37.3
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 2.4e-12 76.6 153 37.3
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 7.0e-12 75.1 158 35.4
MBI14_g38258_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.6e-11 73.9 120 40.0
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 7.8e-11 71.6 144 36.8
ATMG01410 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 7.8e-11 71.6 130 33.8
Nn1g10174 Nelumbo nucifera HOM05D011968 ORTHO05D014241 7.8e-11 71.6 35 91.4
Nn2g13591 Nelumbo nucifera HOM05D011968 ORTHO05D014241 7.8e-11 71.6 35 91.4
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.7e-10 70.5 134 38.8
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.7e-10 70.5 146 34.2
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 1.7e-10 70.5 134 38.8
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 2.3e-10 70.1 146 34.2
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 2.3e-10 70.1 121 40.5
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 2.3e-10 70.1 146 34.2
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 2.3e-10 70.1 146 34.2
MBI05_g11249_MAGBIO Magnolia biondii HOM05D017124 ORTHO05D017284 3.8e-10 69.3 70 58.6
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 5.0e-10 68.9 133 35.3
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 8.6e-10 68.2 153 35.9
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 1.1e-09 67.8 126 36.5
MBI05_g05346_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.5e-09 67.4 166 27.7
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 1.5e-09 67.4 109 37.6
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 1.9e-09 67.0 115 35.7
TAR626G0574 Trochodendron aralioides HOM05D002660 ORTHO05D003902 3.3e-09 66.2 74 45.9
Lsat_1_v5_gn_5_13340 Lactuca sativa HOM05D002660 ORTHO05D003902 7.3e-09 65.1 120 33.3
Lsat_1_v5_gn_5_172580 Lactuca sativa HOM05D002660 ORTHO05D003902 7.3e-09 65.1 120 33.3
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 1.6e-08 63.9 132 34.8
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 4.7e-08 62.4 64 48.4
Glyma.12G175100 Glycine max HOM05D002660 ORTHO05D003902 6.1e-08 62.0 108 36.1
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 8.0e-08 61.6 64 43.8
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 1.0e-07 61.2 51 52.9
SGA_v2.0_scaffold479G52276 Striga asiatica HOM05D002660 ORTHO05D003902 1.4e-07 60.8 113 36.3
Nitab4.5_0010333g0140 Nicotiana tabacum HOM05D011968 ORTHO05D014241 1.8e-07 60.5 30 86.7
Hma1.2p1_1529F.1_g289140 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 3.0e-07 59.7 65 47.7
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 4.0e-07 59.3 148 33.1
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.0e-07 59.3 51 52.9
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.0e-07 59.3 51 52.9
Sopen05g012620 Solanum pennellii HOM05D002660 ORTHO05D003902 4.0e-07 59.3 51 52.9
Sed0024408 Sechium edule HOM05D002660 ORTHO05D003902 6.8e-07 58.5 49 51.0
Hma1.2p1_1430F.1_g282940 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 8.9e-07 58.2 65 46.2
Gorai.001G165500 Gossypium raimondii HOM05D011380 ORTHO05D016005 1.2e-06 57.8 124 41.1
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 1.2e-06 57.8 135 37.0
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 1.2e-06 57.8 130 33.8
Cfa021334 Carpinus fangiana HOM05D002660 ORTHO05D003902 2.0e-06 57.0 138 32.6
Solyc11g030860.3 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.0e-06 57.0 101 42.6
Thhalv10003100m.g Eutrema salsugineum HOM05D002660 ORTHO05D003902 4.4e-06 55.8 49 51.0
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 7.5e-06 55.1 138 32.6
ATMG00490 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 9.8e-06 54.7 45 53.3
CAN.G993.8 Capsicum annuum HOM05D002660 ORTHO05D003902 9.8e-06 54.7 51 45.1


User provided reference genes

Program Settings