Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.4e-234 815.8 403 100.0
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 8.7e-224 780.0 399 96.5
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 3.7e-206 721.5 399 89.0
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 3.1e-205 718.4 399 89.0
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 2.9e-203 711.8 399 88.2
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 2.5e-202 708.8 399 88.2
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 4.2e-202 708.0 399 87.7
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 8.6e-155 550.8 403 67.0
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 7.3e-154 547.7 397 67.8
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 1.2e-153 547.0 401 66.8
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 8.0e-153 544.3 389 69.4
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 4.0e-152 542.0 398 68.1
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 1.7e-150 536.6 389 68.4
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 8.3e-150 534.3 389 68.4
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 3.2e-149 532.3 391 66.2
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 5.4e-149 531.6 388 68.0
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 1.6e-148 530.0 390 67.4
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.3e-147 526.9 389 65.0
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 2.3e-147 526.2 388 66.5
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 2.3e-147 526.2 389 66.1
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 3.9e-147 525.4 389 66.8
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.9e-146 523.1 397 64.7
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 1.9e-146 523.1 374 66.8
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 1.9e-146 523.1 374 66.8
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 3.3e-146 522.3 389 64.8
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 3.3e-146 522.3 398 62.8
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 9.5e-146 520.8 399 63.4
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.2e-145 520.4 397 64.2
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.6e-145 520.0 398 62.6
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 2.1e-145 519.6 389 65.0
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.8e-145 519.2 389 64.3
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 2.8e-145 519.2 399 64.7
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 2.8e-145 519.2 388 64.2
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 4.7e-145 518.5 389 63.8
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 4.7e-145 518.5 398 64.3
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 8.0e-145 517.7 390 64.6
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.0e-144 517.3 397 64.5
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 5.2e-144 515.0 401 62.6
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 5.2e-144 515.0 389 65.0
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 8.9e-144 514.2 390 62.8
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 2.6e-143 512.7 388 63.4
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 5.8e-143 511.5 399 62.2
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 9.8e-143 510.8 387 64.3
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 4.9e-142 508.4 399 63.2
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 8.3e-142 507.7 391 61.9
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 2.4e-141 506.1 389 61.4
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 7.0e-141 504.6 395 61.8
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 7.0e-141 504.6 401 62.8
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 2.7e-140 502.7 389 62.7
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 2.7e-140 502.7 388 64.2
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 3.5e-140 502.3 388 61.9
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 1.0e-139 500.7 395 61.5
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.3e-139 500.4 402 60.7
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 1.9e-138 496.5 398 62.8
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 4.3e-138 495.4 389 60.9
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.3e-138 495.4 391 62.7
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.2e-137 493.8 387 61.2
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.6e-137 493.4 389 62.0
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 2.1e-137 493.0 389 60.7
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 8.1e-137 491.1 389 60.9
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 2.3e-136 489.6 400 58.5
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 2.9e-134 482.6 391 59.6
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 2.9e-134 482.6 393 60.1
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 1.4e-133 480.3 387 60.2
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 4.1e-133 478.8 392 60.2
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 1.2e-132 477.2 392 59.7
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 1.6e-132 476.9 404 58.9
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 3.5e-132 475.7 392 59.4
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.0e-131 474.2 386 58.5
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 2.3e-131 473.0 395 58.5
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 2.3e-131 473.0 392 59.2
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 3.0e-131 472.6 390 60.3
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 3.9e-131 472.2 392 58.9
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 8.6e-131 471.1 396 59.1
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 1.1e-130 470.7 403 58.3
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 7.3e-130 468.0 389 59.1
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 2.1e-129 466.5 392 58.2
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 2.1e-129 466.5 392 58.2
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 2.8e-129 466.1 402 57.7
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 2.8e-129 466.1 393 58.0
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 2.3e-128 463.0 401 57.9
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 3.2e-125 452.6 391 56.8
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 5.1e-123 445.3 374 58.6
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 1.9e-122 443.4 384 57.6
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 1.9e-122 443.4 344 61.3
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 4.4e-119 432.2 402 55.7
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 1.3e-118 430.6 379 56.2
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 2.2e-118 429.9 410 54.4
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 9.3e-117 424.5 394 51.3
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 3.6e-113 412.5 358 56.4
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.4e-112 409.8 370 57.8
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 3.5e-108 396.0 353 56.1
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 4.3e-106 389.0 314 61.1
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.5e-101 372.1 276 64.1
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 9.3e-101 371.3 390 50.3
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 5.1e-99 365.5 266 68.8
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 7.4e-98 361.7 405 49.9
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 2.7e-92 343.2 261 65.5
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 1.5e-90 337.4 389 42.9
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 8.2e-89 331.6 233 65.2
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 3.6e-84 316.2 382 44.2
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 2.5e-77 293.5 398 38.4
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 1.5e-74 284.3 189 69.8
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 1.0e-70 271.6 233 63.1
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 1.8e-64 250.8 193 62.2
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.2e-62 243.8 162 67.9
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.5e-61 241.1 242 50.8
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.1e-60 237.3 192 64.6
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 5.7e-58 229.2 152 78.9
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 1.8e-56 224.2 169 68.6
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 1.0e-54 218.4 184 65.2
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 1.0e-51 208.4 151 69.5
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.5e-50 204.5 160 60.6
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 5.4e-48 196.1 199 53.3
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 2.8e-44 183.7 147 64.6
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 5.2e-43 179.5 427 30.7
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 8.9e-43 178.7 154 59.7
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 9.8e-42 175.3 349 32.1
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.9e-41 172.9 135 57.8
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 5.4e-40 169.5 110 70.9
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 8.6e-38 162.2 237 38.8
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 2.1e-36 157.5 93 88.2
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 2.0e-34 151.0 380 31.8
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 1.7e-33 147.9 93 73.1
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.7e-31 140.6 84 78.6
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 1.1e-24 118.6 458 26.4
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 1.0e-22 112.1 220 32.7
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 1.1e-19 102.1 85 54.1
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 1.5e-18 98.2 72 73.6
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 6.4e-17 92.8 57 68.4
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 3.6e-12 77.0 83 45.8
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 7.6e-10 69.3 87 49.4
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 2.9e-09 67.4 54 59.3


User provided reference genes

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