Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.8e-85 319.3 171 100.0
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 3.6e-78 295.0 169 94.1
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 1.1e-74 283.5 169 89.9
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 3.5e-73 278.5 169 88.8
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 5.9e-73 277.7 169 88.2
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 1.6e-70 269.6 169 85.2
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 1.4e-53 213.4 176 65.9
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 3.2e-50 202.2 170 63.5
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.2e-49 200.3 174 61.5
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 2.1e-49 199.5 169 61.5
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.0e-48 197.2 174 60.9
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 5.1e-48 194.9 174 60.3
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 6.2e-46 188.0 171 60.8
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.4e-45 186.8 170 60.6
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 1.2e-44 183.7 171 55.6
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 7.6e-44 181.0 173 57.2
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 1.7e-43 179.9 169 55.0
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 2.2e-43 179.5 176 55.7
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 2.9e-43 179.1 168 60.1
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 2.9e-43 179.1 171 55.0
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 4.9e-43 178.3 173 59.0
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 6.4e-43 177.9 176 55.7
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 2.4e-42 176.0 172 58.7
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 1.2e-41 173.7 174 54.0
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.2e-41 173.7 171 56.1
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 1.6e-41 173.3 171 53.8
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 1.6e-41 173.3 173 53.8
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 2.1e-41 172.9 170 54.7
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 2.1e-41 172.9 169 54.4
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 3.5e-41 172.2 183 54.1
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 3.5e-41 172.2 172 55.2
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 6.0e-41 171.4 171 55.6
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 1.7e-40 169.9 174 51.1
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 3.0e-40 169.1 173 54.3
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 5.1e-40 168.3 170 55.3
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 6.6e-40 167.9 173 54.3
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 6.6e-40 167.9 170 53.5
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 8.7e-40 167.5 172 52.9
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 1.1e-39 167.2 173 50.9
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 1.5e-39 166.8 169 51.5
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 1.5e-39 166.8 173 53.2
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 3.3e-39 165.6 169 51.5
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 3.3e-39 165.6 169 51.5
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 3.3e-39 165.6 170 52.4
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 4.3e-39 165.2 169 52.7
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 5.6e-39 164.9 173 53.8
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 9.6e-39 164.1 170 52.9
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 2.1e-38 162.9 173 52.6
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 4.8e-38 161.8 177 52.5
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 4.8e-38 161.8 169 50.9
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 4.8e-38 161.8 169 50.9
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 4.8e-38 161.8 169 50.9
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 6.2e-38 161.4 169 50.9
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 1.1e-37 160.6 172 51.2
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 1.4e-37 160.2 172 50.6
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 1.4e-37 160.2 169 51.5
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 4.0e-37 158.7 174 51.7
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 9.0e-37 157.5 158 51.9
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 9.0e-37 157.5 158 51.9
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 9.0e-37 157.5 161 52.2
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 1.5e-36 156.8 166 51.8
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 4.4e-36 155.2 174 51.7
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 7.6e-36 154.5 174 49.4
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 4.9e-35 151.8 172 48.3
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 4.9e-35 151.8 171 52.0
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 3.2e-34 149.1 142 57.0
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 4.2e-34 148.7 170 49.4
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 4.2e-34 148.7 170 49.4
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 4.2e-34 148.7 171 48.5
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 5.4e-34 148.3 170 49.4
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 1.6e-33 146.7 159 51.6
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 2.1e-33 146.4 171 49.1
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 2.7e-33 146.0 172 51.2
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 7.8e-33 144.4 169 48.5
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 1.3e-32 143.7 174 46.6
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.3e-32 143.7 168 48.8
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 8.7e-32 141.0 171 47.4
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 1.5e-31 140.2 163 49.7
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 5.6e-31 138.3 164 46.3
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 6.2e-30 134.8 168 47.0
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 8.1e-30 134.4 140 48.6
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 4.0e-29 132.1 174 47.7
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 9.0e-29 131.0 169 47.3
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 9.0e-29 131.0 168 42.9
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 9.0e-29 131.0 167 42.5
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 2.2e-27 126.3 168 45.2
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 2.9e-27 125.9 171 45.6
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 3.2e-26 122.5 124 54.8
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.2e-25 120.6 131 48.9
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.3e-24 117.1 169 43.2
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 3.9e-24 115.5 169 43.8
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 2.1e-22 109.8 171 40.4
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 2.0e-20 103.2 171 42.7
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 2.0e-20 103.2 149 45.0
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 3.0e-16 89.4 152 40.1
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 5.7e-15 85.1 123 43.9
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 4.8e-14 82.0 152 34.2
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 5.3e-13 78.6 134 38.1
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 3.8e-11 72.4 135 34.8
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 5.0e-11 72.0 152 31.6
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 9.3e-10 67.8 189 28.0
CAN.G1030.15 Capsicum annuum HOM05D007459 ORTHO05D009234 4.6e-09 65.5 59 67.8
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 8.7e-08 61.2 69 53.6
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 5.7e-07 58.5 75 45.3


User provided reference genes

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