Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.2e-70 269.6 130 100.0
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 9.5e-39 163.7 133 66.9
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.1e-37 160.2 96 79.2
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 3.1e-37 158.7 96 78.1
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 3.1e-37 158.7 96 78.1
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 6.8e-37 157.5 88 85.2
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 4.1e-34 148.3 125 60.8
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 2.7e-33 145.6 88 77.3
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 3.9e-32 141.7 88 70.5
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 1.1e-31 140.2 88 71.6
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 1.5e-31 139.8 88 72.7
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 1.9e-31 139.4 87 72.4
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 1.9e-31 139.4 88 73.9
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 1.9e-31 139.4 88 73.9
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 2.5e-31 139.0 87 73.6
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.5e-31 139.0 88 72.7
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 3.3e-31 138.7 88 75.0
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.3e-31 138.7 74 89.2
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 7.3e-31 137.5 74 87.8
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 9.5e-31 137.1 88 70.5
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 3.6e-30 135.2 88 71.6
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 3.6e-30 135.2 88 69.3
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 4.7e-30 134.8 88 70.5
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 6.2e-30 134.4 88 71.6
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 6.2e-30 134.4 88 71.6
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 1.1e-29 133.7 88 68.2
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.4e-29 133.3 77 84.4
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.4e-29 133.3 96 62.5
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 1.8e-29 132.9 88 68.2
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 1.8e-29 132.9 88 68.2
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.3e-29 132.5 110 61.8
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 5.2e-29 131.3 96 62.5
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 5.2e-29 131.3 88 70.5
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 5.2e-29 131.3 88 68.2
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 2.6e-28 129.0 88 65.9
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.4e-28 128.6 88 64.8
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 3.4e-28 128.6 96 61.5
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 4.4e-28 128.3 88 65.9
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 4.4e-28 128.3 96 60.4
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 4.4e-28 128.3 96 61.5
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 4.4e-28 128.3 96 61.5
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 4.4e-28 128.3 96 61.5
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 7.5e-28 127.5 96 59.4
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 7.5e-28 127.5 88 65.9
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 7.5e-28 127.5 96 59.4
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 9.9e-28 127.1 96 59.4
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 2.2e-27 125.9 96 62.5
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 3.7e-27 125.2 87 66.7
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 4.9e-27 124.8 96 62.5
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 8.3e-27 124.0 84 65.5
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.4e-26 123.2 88 62.5
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.9e-26 122.9 96 58.3
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 2.4e-26 122.5 96 58.3
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 2.4e-26 122.5 88 62.5
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 5.4e-26 121.3 96 57.3
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 7.1e-26 120.9 89 60.7
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 7.1e-26 120.9 88 63.6
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 7.1e-26 120.9 88 60.2
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 7.1e-26 120.9 88 64.8
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 7.1e-26 120.9 85 65.9
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 9.2e-26 120.6 96 57.3
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 9.2e-26 120.6 89 64.0
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 1.2e-25 120.2 96 57.3
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 1.6e-25 119.8 96 57.3
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.1e-25 119.4 96 55.2
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 2.7e-25 119.0 96 56.2
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 2.7e-25 119.0 87 62.1
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.7e-25 119.0 95 55.8
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 3.5e-25 118.6 96 54.2
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 4.6e-25 118.2 89 60.7
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 4.6e-25 118.2 86 61.6
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 6.0e-25 117.9 96 55.2
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 7.8e-25 117.5 96 56.2
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 7.8e-25 117.5 90 61.1
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 7.8e-25 117.5 89 60.7
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.0e-24 117.1 96 54.2
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 1.3e-24 116.7 96 57.3
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.7e-24 116.3 87 58.6
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 2.3e-24 115.9 96 54.2
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 2.3e-24 115.9 76 68.4
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 2.3e-24 115.9 80 65.0
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 3.9e-24 115.2 96 55.2
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 3.9e-24 115.2 93 54.8
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.9e-24 115.2 82 63.4
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.9e-24 115.2 82 63.4
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 8.6e-24 114.0 88 62.5
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 1.1e-23 113.6 96 54.2
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 1.1e-23 113.6 86 58.1
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 1.5e-23 113.2 96 54.2
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.9e-23 112.8 103 53.4
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 1.9e-23 112.8 99 56.6
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 2.5e-23 112.5 90 55.6
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 2.5e-23 112.5 90 55.6
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 2.5e-23 112.5 90 55.6
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 4.3e-23 111.7 96 53.1
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 7.3e-23 110.9 96 52.1
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 7.3e-23 110.9 96 50.0
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 9.5e-23 110.5 96 53.1
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.6e-22 109.8 62 85.5
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.6e-22 108.6 62 75.8
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 3.6e-22 108.6 72 65.3
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 6.2e-22 107.8 107 48.6
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 5.2e-21 104.8 83 59.0
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 8.9e-21 104.0 83 55.4
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.2e-20 103.6 80 57.5
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 7.6e-20 100.9 62 71.0
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 9.9e-20 100.5 72 58.3
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 9.9e-20 100.5 96 45.8
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.3e-19 100.1 68 63.2
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 3.8e-19 98.6 96 44.8
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.8e-19 98.6 96 44.8
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.4e-19 97.8 96 44.8
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.4e-19 97.8 96 44.8
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.1e-18 97.1 96 43.8
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 1.1e-18 97.1 74 56.8
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 2.4e-18 95.9 80 53.8
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 7.1e-18 94.4 81 50.6
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 4.6e-17 91.7 98 48.0
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 3.0e-16 89.0 63 61.9
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 8.7e-16 87.4 61 68.9
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 8.7e-16 87.4 93 45.2
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 6.2e-14 81.3 79 49.4
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 5.3e-13 78.2 58 55.2
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 5.3e-13 78.2 55 61.8
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 5.3e-13 78.2 69 47.8
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 7.6e-12 74.3 45 71.1
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 8.7e-08 60.8 65 49.2
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 1.6e-06 56.6 42 64.3


User provided reference genes

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