Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 1.3e-55 221.9 569 100.0
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.5e-43 181.8 98 92.9
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 7.8e-37 159.5 90 90.0
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 3.9e-36 157.1 83 92.8
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 7.3e-35 152.9 84 91.7
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 9.6e-35 152.5 90 84.4
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 6.2e-34 149.8 90 83.3
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 1.2e-24 119.0 82 72.0
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 1.2e-24 119.0 81 72.8
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 2.6e-24 117.9 82 70.7
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 4.5e-24 117.1 82 67.1
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 9.9e-24 115.9 77 72.7
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 1.7e-23 115.2 82 68.3
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 2.2e-23 114.8 82 69.5
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 2.2e-23 114.8 79 70.9
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 4.9e-23 113.6 77 74.0
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 4.9e-23 113.6 77 72.7
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 4.9e-23 113.6 84 70.2
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 4.9e-23 113.6 81 65.4
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 4.9e-23 113.6 81 65.4
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 4.9e-23 113.6 81 65.4
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 6.4e-23 113.2 82 67.1
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 8.4e-23 112.8 82 68.3
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 8.4e-23 112.8 82 64.6
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 8.4e-23 112.8 82 64.6
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 8.4e-23 112.8 82 67.1
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 1.4e-22 112.1 82 68.3
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 2.5e-22 111.3 77 70.1
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 2.5e-22 111.3 77 70.1
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 2.5e-22 111.3 81 65.4
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 2.5e-22 111.3 77 71.4
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 3.2e-22 110.9 78 69.2
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 4.2e-22 110.5 81 64.2
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 7.1e-22 109.8 77 70.1
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 7.1e-22 109.8 77 67.5
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 7.1e-22 109.8 77 70.1
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 9.3e-22 109.4 76 64.5
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 9.3e-22 109.4 81 63.0
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 9.3e-22 109.4 77 70.1
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 1.2e-21 109.0 73 68.5
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 1.2e-21 109.0 77 68.8
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 1.6e-21 108.6 75 69.3
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 2.7e-21 107.8 77 70.1
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.7e-21 107.8 80 67.5
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.7e-21 107.8 80 67.5
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 2.7e-21 107.8 78 70.5
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 2.7e-21 107.8 82 62.2
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 4.6e-21 107.1 77 67.5
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 4.6e-21 107.1 77 70.1
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 4.6e-21 107.1 82 63.4
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 7.9e-21 106.3 78 69.2
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 7.9e-21 106.3 79 65.8
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 1.0e-20 105.9 74 67.6
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.3e-20 105.5 82 62.2
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 1.8e-20 105.1 77 67.5
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 2.3e-20 104.8 77 67.5
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 3.0e-20 104.4 82 59.8
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 5.1e-20 103.6 75 65.3
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 8.7e-20 102.8 80 61.2
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 8.7e-20 102.8 78 66.7
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 1.5e-19 102.1 82 67.1
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 1.9e-19 101.7 82 65.9
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 1.9e-19 101.7 78 65.4
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 2.5e-19 101.3 82 53.7
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 3.3e-19 100.9 82 64.6
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 3.3e-19 100.9 78 66.7
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 3.3e-19 100.9 83 57.8
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 3.3e-19 100.9 78 66.7
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 3.3e-19 100.9 78 66.7
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 4.3e-19 100.5 82 64.6
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 4.3e-19 100.5 78 65.4
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 5.6e-19 100.1 78 67.9
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 7.4e-19 99.8 81 56.8
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 1.3e-18 99.0 81 65.4
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 2.1e-18 98.2 82 62.2
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 2.1e-18 98.2 82 62.2
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 2.1e-18 98.2 82 62.2
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 3.7e-18 97.4 74 58.1
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.8e-18 97.1 63 74.6
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 6.2e-18 96.7 69 68.1
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 6.2e-18 96.7 82 62.2
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.1e-17 95.9 77 59.7
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 1.8e-17 95.1 79 63.3
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 2.4e-17 94.7 76 61.8
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 2.4e-17 94.7 83 61.4
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 2.4e-17 94.7 83 61.4
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 4.0e-17 94.0 82 59.8
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 4.0e-17 94.0 79 54.4
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 5.3e-17 93.6 77 62.3
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 1.2e-16 92.4 78 57.7
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 3.4e-16 90.9 78 56.4
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 4.2e-14 84.0 72 50.0
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 9.3e-14 82.8 55 81.8
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 1.8e-12 78.6 80 58.8
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 1.8e-12 78.6 80 58.8
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.8e-12 78.6 57 66.7
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 3.0e-12 77.8 67 64.2
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.0e-12 77.8 78 50.0
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 1.5e-11 75.5 78 48.7
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 1.9e-11 75.1 58 63.8
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 2.5e-11 74.7 74 47.3
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.3e-11 73.9 50 74.0
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 1.6e-10 72.0 87 41.4
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 1.7e-07 62.0 81 44.4
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.0e-07 60.5 80 45.0
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.9e-06 58.5 80 43.8
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.2e-06 56.6 53 54.7


User provided reference genes

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