Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 0.0e+00 1257.3 675 100.0
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 0.0e+00 1188.7 669 95.4
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 0.0e+00 1104.0 670 86.9
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 0.0e+00 1102.4 669 88.6
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 0.0e+00 1096.6 670 86.4
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 0.0e+00 1085.5 676 85.7
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 0.0e+00 1084.7 670 85.8
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 6.1e-238 827.8 669 67.0
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 2.3e-237 825.9 679 67.0
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.3e-235 820.1 669 66.7
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 1.7e-232 809.7 674 66.6
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 1.0e-229 800.4 670 65.8
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 1.4e-229 800.0 671 64.7
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 3.0e-229 798.9 675 65.2
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 3.7e-227 792.0 671 65.3
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 6.3e-227 791.2 671 65.0
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 7.0e-226 787.7 679 64.7
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 1.0e-221 773.9 672 63.7
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.5e-220 770.0 669 63.2
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 2.0e-220 769.6 673 63.6
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 1.1e-218 763.8 670 63.6
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 1.1e-218 763.8 678 62.7
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.4e-218 763.5 673 63.3
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 5.4e-218 761.5 672 61.9
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 2.7e-217 759.2 672 62.1
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 7.2e-215 751.1 673 63.3
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 9.4e-215 750.7 697 61.1
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 2.3e-213 746.1 698 61.2
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 2.0e-212 743.0 677 60.9
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 3.4e-212 742.3 672 60.9
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 5.7e-212 741.5 675 61.3
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 3.7e-211 738.8 696 60.5
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 4.9e-211 738.4 670 61.2
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 8.3e-211 737.6 684 60.8
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 3.1e-210 735.7 668 61.1
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.2e-209 733.8 671 60.7
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.6e-209 733.4 673 61.5
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 5.9e-209 731.5 677 61.6
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 2.3e-208 729.6 673 61.4
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.9e-208 729.2 660 61.1
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 5.0e-208 728.4 670 61.5
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 6.6e-208 728.0 673 60.6
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.6e-208 728.0 669 60.5
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.0e-205 720.7 687 60.4
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.0e-205 720.7 677 61.3
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 3.0e-205 719.2 673 60.0
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 4.0e-205 718.8 673 60.5
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 5.2e-205 718.4 663 60.9
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 8.9e-205 717.6 672 59.2
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 2.6e-204 716.1 687 60.3
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 2.6e-204 716.1 657 58.8
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 4.4e-204 715.3 667 61.0
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 2.9e-203 712.6 667 60.9
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 3.7e-203 712.2 666 59.9
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 6.4e-203 711.4 671 60.1
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 4.1e-202 708.8 674 58.5
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 2.7e-201 706.1 659 58.7
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 3.0e-200 702.6 661 59.6
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 3.3e-199 699.1 672 58.3
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.1e-198 696.4 687 59.2
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.1e-198 696.4 687 59.2
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 3.6e-198 695.7 683 59.9
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.7e-198 695.3 671 58.6
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 8.0e-198 694.5 669 58.0
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.5e-196 690.3 662 58.3
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 9.8e-196 687.6 672 58.5
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 2.2e-195 686.4 677 58.6
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 8.3e-195 684.5 673 58.4
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 1.5e-191 673.7 660 59.2
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 3.6e-190 669.1 662 57.9
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.4e-189 667.2 649 58.9
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 1.8e-189 666.8 627 60.4
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 6.8e-189 664.8 655 58.8
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.1e-186 657.5 679 56.7
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 1.7e-184 650.2 686 56.1
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 3.9e-184 649.0 668 54.5
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 6.6e-184 648.3 677 56.0
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 6.6e-184 648.3 599 60.4
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 8.6e-184 647.9 675 54.7
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.5e-180 637.1 672 55.7
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 1.5e-180 637.1 646 57.7
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 4.4e-180 635.6 665 54.6
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.7e-177 626.3 660 55.0
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 2.5e-175 619.8 685 54.3
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 5.6e-175 618.6 670 53.3
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.2e-174 617.5 470 67.9
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 1.6e-174 617.1 661 54.8
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 6.2e-174 615.1 682 52.1
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 1.4e-173 614.0 646 56.0
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.8e-173 613.6 680 51.3
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 4.0e-173 612.5 675 52.1
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 5.2e-173 612.1 674 53.4
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 6.0e-169 598.6 679 50.7
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 3.9e-168 595.9 682 50.9
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 9.6e-167 591.3 674 51.8
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.2e-164 584.3 675 51.6
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.5e-164 583.9 674 51.5
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 3.4e-164 582.8 675 51.4
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 3.8e-163 579.3 687 50.2
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 6.7e-136 488.8 340 76.5
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.4e-133 481.1 704 43.3
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.2e-132 478.0 677 43.7
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 9.7e-127 458.4 706 39.5
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 2.2e-123 447.2 674 43.5
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 3.2e-122 443.4 628 44.7
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 9.7e-119 431.8 558 46.2
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 4.8e-118 429.5 310 74.5
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 6.1e-113 412.5 684 38.9
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 3.1e-109 400.2 355 60.0
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 2.5e-98 364.0 310 62.9
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 3.2e-98 363.6 355 57.5
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.7e-70 271.6 252 59.5
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 4.9e-70 270.0 607 32.0
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 3.1e-48 197.6 249 47.8
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 3.8e-46 190.7 328 39.6
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 1.6e-44 185.3 268 43.7
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 9.0e-40 169.5 233 41.2
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 3.3e-26 124.4 357 30.3
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.8e-17 94.0 182 32.4
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.7e-14 85.5 159 39.0
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 6.5e-14 83.6 90 51.1
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 6.3e-09 67.0 206 30.1


User provided reference genes

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