Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.0e-106 387.9 210 100.0
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 4.3e-81 305.1 206 84.0
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 1.2e-75 287.0 189 87.8
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 1.6e-75 286.6 189 84.1
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 1.6e-75 286.6 189 84.1
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 9.5e-73 277.3 189 79.9
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 3.6e-72 275.4 189 82.5
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.2e-63 245.0 191 73.8
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 7.8e-59 231.1 183 71.6
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 1.3e-58 230.3 188 73.4
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 1.7e-58 229.9 180 70.6
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 1.5e-57 226.9 172 72.7
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 1.5e-57 226.9 188 69.1
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 9.6e-57 224.2 183 69.9
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 2.1e-56 223.0 206 65.0
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 4.8e-56 221.9 181 70.2
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 2.4e-55 219.5 186 68.3
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 3.1e-55 219.2 180 70.6
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 6.9e-55 218.0 180 70.0
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 6.9e-55 218.0 180 70.0
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 9.0e-55 217.6 183 70.5
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 9.0e-55 217.6 171 70.2
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.5e-54 216.9 183 69.9
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 1.5e-54 216.9 183 69.9
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.0e-54 216.5 180 69.4
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 5.8e-54 214.9 180 70.0
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 9.9e-54 214.2 179 69.8
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 1.7e-53 213.4 172 70.9
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 2.9e-53 212.6 171 68.4
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 1.1e-52 210.7 182 65.4
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 1.1e-52 210.7 169 69.8
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 1.1e-52 210.7 180 65.6
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 3.2e-52 209.1 171 66.7
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 4.2e-52 208.8 172 68.0
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 5.4e-52 208.4 190 64.2
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 7.1e-52 208.0 179 68.2
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 7.1e-52 208.0 169 72.8
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 7.1e-52 208.0 144 76.4
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 9.3e-52 207.6 190 66.3
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 1.2e-51 207.2 182 65.4
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 1.6e-51 206.8 185 65.9
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 2.1e-51 206.5 170 66.5
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 2.1e-51 206.5 179 67.6
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 2.7e-51 206.1 144 75.7
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 2.7e-51 206.1 166 72.3
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 3.5e-51 205.7 183 65.6
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 3.5e-51 205.7 175 65.7
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 4.6e-51 205.3 191 66.5
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 4.6e-51 205.3 178 64.6
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 6.0e-51 204.9 179 66.5
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 3.9e-50 202.2 170 67.1
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 6.6e-50 201.4 199 63.8
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 8.7e-50 201.1 175 65.1
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 1.6e-48 196.8 183 63.4
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 2.1e-48 196.4 196 62.8
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 2.8e-48 196.1 181 63.0
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 3.6e-48 195.7 192 64.6
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 1.1e-47 194.1 191 64.4
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 1.4e-47 193.7 178 65.2
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 1.8e-47 193.4 188 63.3
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 2.4e-47 193.0 193 63.2
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 5.3e-47 191.8 196 62.2
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 6.9e-47 191.4 198 62.6
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 6.9e-47 191.4 189 63.0
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 6.9e-47 191.4 200 61.5
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 6.9e-47 191.4 177 64.4
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 9.0e-47 191.0 193 63.2
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 9.0e-47 191.0 193 63.2
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 9.0e-47 191.0 173 63.6
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 1.2e-46 190.7 179 64.2
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.2e-46 190.7 181 64.1
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 2.0e-46 189.9 181 64.1
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 2.0e-46 189.9 178 64.0
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 2.6e-46 189.5 184 63.6
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 4.5e-46 188.7 184 60.9
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 4.5e-46 188.7 176 64.8
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 7.6e-46 188.0 178 64.6
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 9.9e-46 187.6 192 63.0
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 9.9e-46 187.6 194 61.9
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 9.9e-46 187.6 194 61.9
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 1.3e-45 187.2 190 59.5
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 1.3e-45 187.2 168 64.9
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 2.2e-45 186.4 199 60.8
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 2.9e-45 186.0 200 60.0
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 2.9e-45 186.0 134 76.1
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 3.8e-45 185.7 194 61.3
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 6.4e-45 184.9 163 65.6
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 6.4e-45 184.9 163 65.6
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 1.4e-44 183.7 170 63.5
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 3.2e-44 182.6 194 61.3
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 3.2e-44 182.6 173 60.7
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 1.2e-43 180.6 173 61.3
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 1.6e-43 180.3 136 74.3
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 1.6e-43 180.3 174 61.5
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 2.7e-43 179.5 118 81.4
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 2.7e-43 179.5 187 58.3
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 3.5e-43 179.1 118 81.4
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 3.5e-43 179.1 175 60.6
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 4.6e-43 178.7 123 78.9
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 1.5e-41 173.7 175 60.6
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 1.9e-41 173.3 179 60.9
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.3e-40 170.6 195 57.4
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 2.8e-40 169.5 216 50.5
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 1.4e-39 167.2 118 78.0
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 1.4e-39 167.2 117 76.1
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 4.0e-39 165.6 172 58.7
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 2.7e-35 152.9 126 66.7
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.8e-34 150.2 265 40.8
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 1.1e-31 141.0 148 56.8
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 5.8e-30 135.2 136 58.8
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 3.8e-29 132.5 187 49.2
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 1.4e-28 130.6 176 50.0
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 1.0e-26 124.4 172 49.4
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 1.8e-26 123.6 172 47.7
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 2.3e-26 123.2 142 57.0
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 7.4e-25 118.2 144 56.2
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 1.6e-24 117.1 354 33.3
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 1.6e-24 117.1 72 79.2
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 8.2e-24 114.8 128 53.9
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 2.9e-21 106.3 161 44.7
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 1.9e-20 103.6 124 50.8
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 3.2e-20 102.8 116 59.5
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.7e-16 90.5 74 68.9
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 1.5e-14 84.0 89 51.7
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 3.4e-14 82.8 107 53.3
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 3.4e-14 82.8 107 50.5
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 6.1e-11 72.0 50 80.0
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 1.8e-10 70.5 82 57.3
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 3.9e-10 69.3 81 49.4
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 2.2e-08 63.5 39 84.6


User provided reference genes

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