Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013152g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 8.6e-194 680.2 368 100.0
Nitab4.5_0013856g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.2e-85 320.1 371 56.3
Nitab4.5_0001593g0020 Nicotiana tabacum HOM05D008559 ORTHO05D007738 5.6e-60 235.7 322 51.2
Nitab4.5_0001016g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.3e-28 130.2 139 57.6
Nitab4.5_0006309g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.3e-28 130.2 139 56.8
Nitab4.5_0004542g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 7.3e-28 129.0 102 67.6
Nitab4.5_0000773g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.6e-28 128.6 140 57.1
Nitab4.5_0003320g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.2e-27 125.9 139 56.1
Nitab4.5_0002031g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.0e-26 123.2 217 41.9
Nitab4.5_0013152g0010 Nicotiana tabacum HOM05D000015 ORTHO05D000803 5.3e-26 122.9 210 49.0
Nitab4.5_0000311g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.9e-24 117.1 103 67.0
Nitab4.5_0000163g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.3e-21 107.5 115 53.9
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 8.7e-21 105.5 145 52.4
Nitab4.5_0002173g0030 Nicotiana tabacum HOM05D014863 ORTHO05D011161 1.5e-20 104.8 115 53.0
Nitab4.5_0005942g0040 Nicotiana tabacum HOM05D026609 ORTHO05D285410 1.6e-19 101.3 281 34.9
Nitab4.5_0004792g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.2e-17 95.1 72 69.4
Nitab4.5_0000338g0200 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.5e-17 93.2 67 73.1
Nitab4.5_0004380g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 7.6e-17 92.4 128 43.0
Nitab4.5_0000315g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.3e-16 91.7 57 77.2
Nitab4.5_0000493g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.8e-16 90.1 72 65.3
Nitab4.5_0002970g0020 Nicotiana tabacum HOM05D026609 ORTHO05D283120 1.4e-15 88.2 208 35.6
Nitab4.5_0000206g0150 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.9e-15 87.8 81 51.9
Nitab4.5_0000700g0040 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.9e-15 87.8 202 34.2
Nitab4.5_0000337g0190 Nicotiana tabacum HOM05D014863 ORTHO05D011161 4.2e-15 86.7 214 34.1
Nitab4.5_0004318g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 7.1e-15 85.9 112 47.3
Nitab4.5_0000719g0070 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.3e-15 85.5 101 52.5
Nitab4.5_0000678g0010 Nicotiana tabacum HOM05D026609 ORTHO05D286796 2.1e-14 84.3 380 28.4
Nitab4.5_0001881g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.0e-13 82.0 131 47.3
Nitab4.5_0000449g0040 Nicotiana tabacum HOM05D008559 ORTHO05D286507 2.3e-13 80.9 287 29.3
Nitab4.5_0000431g0120 Nicotiana tabacum HOM05D014863 ORTHO05D011161 1.1e-12 78.6 57 63.2
Nitab4.5_0002719g0010 Nicotiana tabacum HOM05D014863 ORTHO05D011161 9.6e-12 75.5 63 63.5
Nitab4.5_0000157g0320 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.3e-11 75.1 54 72.2
Nitab4.5_0000030g0030 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.6e-11 74.7 54 70.4
Nitab4.5_0000290g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.6e-11 74.7 68 60.3
Nitab4.5_0004043g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.1e-11 74.3 99 46.5
Nitab4.5_0011107g0010 Nicotiana tabacum HOM05D019424 ORTHO05D285801 2.1e-11 74.3 382 26.2
Nitab4.5_0000107g0080 Nicotiana tabacum HOM05D008559 ORTHO05D283367 2.8e-11 73.9 63 57.1
PGSC0003DMG400041497 Solanum tuberosum HOM05D008559 ORTHO05D026183 8.2e-11 72.4 73 46.6
Nitab4.5_0002509g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.1e-10 72.0 125 37.6
Nitab4.5_0000104g0250 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.8e-10 71.2 54 68.5
PGSC0003DMG400021037 Solanum tuberosum HOM05D008559 ORTHO05D026183 3.1e-10 70.5 82 43.9
PGSC0003DMG400042155 Solanum tuberosum HOM05D008559 ORTHO05D026183 1.2e-09 68.6 71 46.5
Nitab4.5_0002100g0090 Nicotiana tabacum HOM05D008559 ORTHO05D011161 5.8e-09 66.2 72 54.2
Nitab4.5_0000945g0060 Nicotiana tabacum HOM05D008559 ORTHO05D284281 7.6e-09 65.9 125 37.6
Solyc11g039800.2 Solanum lycopersicum HOM05D008559 ORTHO05D026183 2.2e-08 64.3 135 35.6
Nitab4.5_0006081g0020 Nicotiana tabacum HOM05D014863 ORTHO05D011161 1.4e-07 61.6 57 56.1
Nitab4.5_0000257g0050 Nicotiana tabacum HOM05D014863 ORTHO05D011161 3.2e-07 60.5 321 25.5
Nitab4.5_0000006g0060 Nicotiana tabacum HOM05D008559 ORTHO05D283084 1.2e-06 58.5 91 36.3
Nitab4.5_0002162g0220 Nicotiana tabacum HOM05D014647 ORTHO05D000007 2.7e-06 57.4 124 37.9
Nitab4.5_0000740g0110 Nicotiana tabacum HOM05D008559 ORTHO05D282931 4.6e-06 56.6 69 47.8


User provided reference genes

Program Settings