Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.5e-223 779.2 398 100.0
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.8e-136 490.0 284 88.7
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 4.4e-135 485.3 284 88.4
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 9.7e-135 484.2 284 87.7
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.1e-133 480.7 284 86.6
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.2e-122 442.6 280 82.9
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.5e-119 433.7 289 77.2
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 7.5e-119 431.4 289 75.4
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.7e-115 420.2 270 74.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.3e-115 419.9 286 74.1
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.3e-115 419.9 270 74.8
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.6e-113 413.7 291 72.5
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 4.0e-112 409.1 270 74.1
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 2.6e-111 406.4 277 71.5
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 5.7e-111 405.2 270 74.1
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 4.9e-110 402.1 270 74.4
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 6.3e-110 401.7 281 73.0
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.1e-109 401.0 269 72.5
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.1e-109 401.0 284 71.8
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 1.1e-109 401.0 287 70.0
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.8e-109 400.2 270 73.3
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 5.4e-109 398.7 289 71.6
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 9.2e-109 397.9 287 68.6
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 9.2e-109 397.9 303 69.3
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.2e-108 397.5 289 71.3
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.6e-108 397.1 269 73.2
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 2.7e-108 396.4 290 70.7
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 4.5e-108 395.6 270 72.6
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 5.9e-108 395.2 270 73.0
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 7.8e-108 394.8 271 72.3
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 7.8e-108 394.8 291 69.1
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 1.3e-107 394.0 269 73.2
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 2.3e-107 393.3 292 69.9
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 2.9e-107 392.9 269 72.1
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.9e-107 392.9 285 70.9
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 3.9e-107 392.5 270 72.2
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 3.9e-107 392.5 271 71.2
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.1e-106 391.0 276 70.3
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-106 391.0 289 68.9
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.5e-106 390.6 269 71.7
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.9e-106 390.2 269 72.1
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.9e-106 390.2 269 72.1
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.9e-106 390.2 269 72.1
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.9e-106 390.2 289 69.6
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 9.5e-106 387.9 270 71.1
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 9.5e-106 387.9 289 69.6
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.6e-105 387.1 269 69.9
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 2.1e-105 386.7 287 67.2
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 2.1e-105 386.7 270 71.9
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 3.6e-105 386.0 269 71.7
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.6e-105 386.0 289 68.2
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 4.7e-105 385.6 269 71.4
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.0e-104 384.4 271 71.6
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.0e-104 384.4 285 67.7
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.0e-104 384.4 285 67.7
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.0e-104 384.4 285 67.7
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 1.4e-104 384.0 284 66.9
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 3.1e-104 382.9 289 65.7
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 3.1e-104 382.9 289 66.8
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 4.0e-104 382.5 275 70.2
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 5.2e-104 382.1 284 66.9
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.8e-104 381.7 284 67.3
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 8.9e-104 381.3 314 62.4
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 8.9e-104 381.3 270 70.7
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.2e-103 380.9 286 69.2
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 2.6e-103 379.8 287 66.6
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 3.4e-103 379.4 292 65.8
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 5.8e-103 378.6 285 67.0
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 5.8e-103 378.6 289 67.8
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.3e-102 377.5 266 67.7
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.4e-102 375.2 285 66.7
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 5.4e-101 372.1 200 92.5
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.3e-99 367.5 268 70.1
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 5.0e-99 365.5 334 59.6
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 4.3e-98 362.5 284 65.5
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.8e-97 359.8 289 66.8
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 7.5e-95 351.7 284 62.7
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 8.3e-94 348.2 243 72.0
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 5.4e-93 345.5 252 69.0
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.2e-92 344.4 309 59.2
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.5e-92 342.8 289 61.2
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 7.8e-92 341.7 284 63.4
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 3.9e-91 339.3 288 63.5
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 3.3e-90 336.3 289 63.3
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.8e-89 333.2 240 70.0
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 6.8e-88 328.6 264 65.5
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.1e-82 311.2 254 67.3
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.1e-82 311.2 254 67.3
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 3.3e-82 309.7 290 56.9
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 4.9e-78 295.8 270 52.6
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 6.4e-78 295.4 277 52.3
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 6.4e-78 295.4 192 76.0
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 6.2e-73 278.9 273 48.7
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.1e-72 276.6 294 46.3
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 3.8e-70 269.6 219 60.3
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.6e-65 254.2 268 50.4
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.6e-63 246.9 311 42.1
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.6e-60 237.7 201 59.7
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 7.9e-60 235.3 290 45.2
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 7.4e-58 228.8 157 70.1
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 9.6e-58 228.4 170 62.4
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 3.5e-52 209.9 288 41.7
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.1e-50 204.9 246 48.4
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 1.1e-50 204.9 152 67.8
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.9e-50 204.1 147 66.7
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.1e-42 178.3 142 62.0
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.4e-40 171.4 129 64.3
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 2.5e-34 150.6 115 67.0
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 3.7e-25 120.2 91 67.0
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 3.5e-23 113.6 70 82.9
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 5.9e-23 112.8 88 64.8
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 5.9e-23 112.8 103 56.3
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 9.7e-18 95.5 203 32.5
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.2e-12 78.6 218 29.4
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.8e-09 67.4 72 47.2
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 1.8e-08 64.7 43 72.1


User provided reference genes

Program Settings