Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013051g0010 Nicotiana tabacum HOM05D002035 ORTHO05D002032 9.7e-64 246.5 113 100.0
CAN.G438.100 Capsicum annuum HOM05D002035 ORTHO05D002032 8.5e-36 153.7 114 62.3
Solyc03g119900.4 Solanum lycopersicum HOM05D002035 ORTHO05D002032 7.5e-24 114.0 111 55.9
Peaxi162Scf00015g00535 Petunia axillaris HOM05D002035 ORTHO05D002032 2.7e-21 105.5 75 58.7
Sopen03g038780 Solanum pennellii HOM05D002035 ORTHO05D002032 7.3e-19 97.4 79 54.4
PSO063G6019 Papaver somniferum HOM05D002035 ORTHO05D002032 1.4e-14 83.2 102 40.2
Atru.chr1.3215 Acer truncatum HOM05D002035 ORTHO05D002032 3.9e-12 75.1 123 36.6
Lj9A505T67 Lonicera japonica HOM05D002035 ORTHO05D002032 1.5e-11 73.2 74 40.5
Atru.chr1.3213 Acer truncatum HOM05D002035 ORTHO05D002032 2.5e-11 72.4 57 50.9
Ciclev10026432m.g Citrus clementina HOM05D002035 ORTHO05D002032 2.5e-11 72.4 113 37.2
Potri.003G057700 Populus trichocarpa HOM05D002035 ORTHO05D002032 5.6e-11 71.2 88 37.5
QL05p025724 Quercus lobata HOM05D002035 ORTHO05D002032 1.6e-10 69.7 119 37.0
Aqoxy7G01891 Aquilegia oxysepala HOM05D002035 ORTHO05D002032 2.8e-10 68.9 80 43.8
CiPaw.01G241400 Carya illinoinensis HOM05D002035 ORTHO05D002032 2.8e-10 68.9 75 40.0
Migut.I00835 Erythranthe guttata HOM05D002035 ORTHO05D002032 4.7e-10 68.2 77 49.4
Glyma.07G033900 Glycine max HOM05D002035 ORTHO05D002032 4.7e-10 68.2 95 37.9
Nn2g11853 Nelumbo nucifera HOM05D002035 ORTHO05D002032 8.1e-10 67.4 89 37.1
Gohir.A05G126700 Gossypium hirsutum HOM05D002035 ORTHO05D002032 1.1e-09 67.0 54 48.1
Manes.04G120300 Manihot esculenta HOM05D002035 ORTHO05D002032 1.4e-09 66.6 96 39.6
Gorai.009G131700 Gossypium raimondii HOM05D002035 ORTHO05D002032 2.3e-09 65.9 97 34.0
Gohir.D05G127600 Gossypium hirsutum HOM05D002035 ORTHO05D002032 4.0e-09 65.1 86 37.2
Lj5A64T49 Lonicera japonica HOM05D002035 ORTHO05D002032 8.9e-09 63.9 50 48.0
Thecc.06G081100 Theobroma cacao HOM05D002035 ORTHO05D002032 1.5e-08 63.2 64 43.8
CSS0016789 Camellia sinensis var. sinensis HOM05D002035 ORTHO05D002032 2.0e-08 62.8 55 45.5
Lj7A639T57 Lonicera japonica HOM05D002035 ORTHO05D002032 2.6e-08 62.4 86 37.2
COL.COLO4_30316 Corchorus olitorius HOM05D002035 ORTHO05D002032 3.4e-08 62.0 57 43.9
FvH4_6g30802 Fragaria vesca HOM05D002035 ORTHO05D002032 3.4e-08 62.0 88 38.6
Sabra03G0033200 Salix brachista HOM05D002035 ORTHO05D002032 5.8e-08 61.2 81 37.0
Duzib192G0363 Durio zibethinus HOM05D002035 ORTHO05D002032 7.5e-08 60.8 83 38.6
Potri.001G176800 Populus trichocarpa HOM05D002035 ORTHO05D002032 2.2e-07 59.3 93 32.3
Atru.chr1.3214 Acer truncatum HOM05D002035 ORTHO05D002032 2.9e-07 58.9 47 46.8
Dinv36594 Davidia involucrata HOM05D002035 ORTHO05D002032 2.9e-07 58.9 74 37.8
DCAR_021322 Daucus carota HOM05D002035 ORTHO05D002032 4.9e-07 58.2 102 32.4
MD17G1198900 Malus domestica HOM05D002035 ORTHO05D002032 4.9e-07 58.2 94 31.9
Manes.11G050600 Manihot esculenta HOM05D002035 ORTHO05D002032 6.4e-07 57.8 112 33.0
Actinidia08824 Actinidia chinensis HOM05D002035 ORTHO05D002032 8.3e-07 57.4 85 32.9
Sed0022414 Sechium edule HOM05D002035 ORTHO05D002032 8.3e-07 57.4 82 32.9
Gohir.D06G057900 Gossypium hirsutum HOM05D002035 ORTHO05D002032 1.1e-06 57.0 77 39.0
COL.COLO4_34949 Corchorus olitorius HOM05D002035 ORTHO05D002032 1.4e-06 56.6 72 31.9
ClCG09G002410 Citrullus lanatus HOM05D002035 ORTHO05D002032 3.2e-06 55.5 107 34.6
Gorai.010G068000 Gossypium raimondii HOM05D002035 ORTHO05D002032 5.4e-06 54.7 117 32.5
MELO3C004369.2 Cucumis melo HOM05D002035 ORTHO05D002032 7.1e-06 54.3 82 35.4
Eucgr.F02570 Eucalyptus grandis HOM05D002035 ORTHO05D002032 7.1e-06 54.3 54 42.6
TWI12G0998 Tripterygium wilfordii HOM05D002035 ORTHO05D002032 7.1e-06 54.3 76 35.5


User provided reference genes

Program Settings