Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 3.5e-112 408.3 207 100.0
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 9.6e-110 400.2 207 97.6
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 6.7e-95 350.9 209 87.1
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 2.9e-90 335.5 205 85.4
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 2.3e-87 325.9 202 84.7
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 4.8e-85 318.2 202 82.7
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 3.1e-68 262.3 171 70.8
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 2.9e-66 255.8 182 65.9
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 3.8e-66 255.4 198 65.2
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 8.5e-66 254.2 207 62.8
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 1.5e-65 253.4 197 62.4
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 2.5e-65 252.7 205 63.4
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 3.2e-65 252.3 197 66.0
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 5.5e-65 251.5 176 69.3
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 2.1e-64 249.6 179 66.5
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 8.0e-64 247.7 207 62.8
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 1.4e-63 246.9 210 60.0
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 1.8e-63 246.5 206 61.2
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.8e-63 246.5 168 68.5
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 2.3e-63 246.1 209 62.2
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 3.0e-63 245.7 208 61.1
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 4.0e-63 245.4 206 60.2
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 4.0e-63 245.4 201 60.7
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.2e-62 243.8 207 61.8
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 1.5e-62 243.4 208 62.0
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.0e-62 243.0 204 62.7
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 2.6e-62 242.7 209 61.7
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 2.6e-62 242.7 183 68.3
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 7.5e-62 241.1 207 58.5
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 7.5e-62 241.1 208 60.6
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 9.7e-62 240.7 174 68.4
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 9.7e-62 240.7 167 66.5
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.7e-61 240.0 177 64.4
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 2.8e-61 239.2 169 66.3
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 4.8e-61 238.4 205 59.5
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 6.3e-61 238.0 228 56.1
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.1e-60 237.3 181 65.7
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.4e-60 236.9 169 65.7
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.8e-60 236.5 179 63.1
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 1.8e-60 236.5 208 60.1
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 1.8e-60 236.5 164 67.7
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 2.4e-60 236.1 179 63.7
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 7.0e-60 234.6 203 60.1
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 9.1e-60 234.2 203 60.6
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.6e-59 233.4 177 63.8
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.5e-59 232.3 180 66.1
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 3.5e-59 232.3 167 66.5
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 3.5e-59 232.3 217 58.1
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 7.7e-59 231.1 202 61.4
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 7.7e-59 231.1 169 64.5
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 1.0e-58 230.7 187 61.0
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.3e-58 230.3 180 65.0
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.7e-58 229.9 178 64.6
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 1.7e-58 229.9 209 57.9
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 1.7e-58 229.9 195 59.0
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.7e-58 229.9 169 65.7
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.2e-58 229.6 180 64.4
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 2.9e-58 229.2 211 57.3
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 3.8e-58 228.8 205 59.0
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.1e-57 227.3 208 57.7
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 1.9e-57 226.5 177 61.0
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.5e-57 226.1 162 66.7
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 4.2e-57 225.3 205 57.1
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 7.2e-57 224.6 179 58.7
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 9.4e-57 224.2 210 56.7
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 9.4e-57 224.2 169 61.5
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.2e-56 223.8 200 58.5
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.6e-56 223.4 170 62.4
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 2.1e-56 223.0 184 59.2
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 2.7e-56 222.6 163 63.2
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.6e-56 222.2 189 61.4
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.4e-55 220.3 184 62.0
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.0e-55 219.2 213 58.2
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 5.2e-55 218.4 207 57.0
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 6.8e-55 218.0 169 65.1
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 6.8e-55 218.0 169 65.1
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 6.8e-55 218.0 169 65.1
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.5e-54 216.9 228 53.9
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 3.4e-54 215.7 158 65.8
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 3.4e-54 215.7 162 61.1
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 3.4e-54 215.7 208 54.8
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 5.7e-54 214.9 170 58.8
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 1.7e-53 213.4 142 68.3
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.7e-53 213.4 208 54.3
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 2.2e-53 213.0 170 63.5
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 3.7e-53 212.2 170 63.5
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 3.7e-53 212.2 209 55.5
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 2.4e-52 209.5 210 52.4
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 7.0e-52 208.0 205 53.7
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 9.1e-52 207.6 218 52.3
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 9.1e-52 207.6 188 58.5
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.6e-51 206.8 197 54.8
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.0e-50 204.1 209 53.1
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.3e-50 203.8 210 54.3
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 2.3e-50 203.0 203 52.2
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 9.5e-49 197.6 203 55.7
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.8e-48 196.1 207 49.3
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 2.8e-48 196.1 219 50.7
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 1.0e-47 194.1 167 58.7
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 1.0e-47 194.1 204 50.5
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.3e-47 193.0 207 48.3
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 5.7e-46 188.3 167 53.9
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 5.8e-38 161.8 170 48.8
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.6e-35 153.7 126 65.9
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 1.7e-34 150.2 90 78.9
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 6.6e-34 148.3 172 50.6
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 1.5e-33 147.1 209 42.6
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.5e-33 147.1 191 44.5
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 1.6e-32 143.7 167 43.7
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 2.1e-32 143.3 168 44.0
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 1.4e-31 140.6 172 45.3
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 1.7e-29 133.7 102 69.6
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 3.5e-27 125.9 78 79.5
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 2.3e-23 113.2 102 57.8
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 7.5e-22 108.2 189 35.4
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.4e-20 104.0 170 34.1
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 7.1e-20 101.7 174 32.2
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 9.5e-17 91.3 135 38.5
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 1.2e-14 84.3 180 27.8
Peaxi162Scf00405g00081 Petunia axillaris HOM05D006662 ORTHO05D008378 7.6e-14 81.6 71 62.0
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 7.1e-12 75.1 213 28.6
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 4.0e-07 59.3 105 35.2
Sabra04G0096800 Salix brachista HOM05D000546 ORTHO05D000398 3.4e-06 56.2 44 54.5


User provided reference genes

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