Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012992g0010 Nicotiana tabacum HOM05D001889 ORTHO05D001853 1.6e-45 185.7 90 100.0
Nitab4.5_0000258g0190 Nicotiana tabacum HOM05D001889 ORTHO05D001853 2.5e-30 135.2 91 78.0
Nitab4.5_0004506g0040 Nicotiana tabacum HOM05D001889 ORTHO05D001853 2.5e-30 135.2 91 76.9
Nitab4.5_0004281g0020 Nicotiana tabacum HOM05D001889 ORTHO05D001853 9.5e-30 133.3 85 77.6
Peaxi162Scf00716g00029 Petunia axillaris HOM05D001889 ORTHO05D000001 3.3e-22 108.2 102 59.8
Dinv32598 Davidia involucrata HOM05D001889 ORTHO05D000001 1.7e-15 85.9 103 47.6
Cc02_g39460 Coffea canephora HOM05D001889 ORTHO05D001853 1.5e-14 82.8 72 54.2
CSS0024595 Camellia sinensis var. sinensis HOM05D001889 ORTHO05D001853 5.6e-14 80.9 80 53.8
ECA236G4907 Erigeron canadensis HOM05D001889 ORTHO05D001853 9.6e-14 80.1 76 53.9
Rhsim01G0173800 Rhododendron simsii HOM05D001889 ORTHO05D000001 4.7e-13 77.8 80 50.0
SGA_v2.0_scaffold5G03026 Striga asiatica HOM05D001889 ORTHO05D001853 4.7e-13 77.8 100 46.0
Migut.B01883 Erythranthe guttata HOM05D001889 ORTHO05D001853 2.6e-11 72.0 105 40.0
DCAR_005395 Daucus carota HOM05D001889 ORTHO05D001853 7.6e-11 70.5 75 49.3
HanXRQChr06g0170781 Helianthus annuus HOM05D001889 ORTHO05D001853 8.4e-10 67.0 90 40.0
Eucgr.E00048 Eucalyptus grandis HOM05D001889 ORTHO05D001853 1.4e-09 66.2 79 45.6
Cpa.g.sc96.34 Carica papaya HOM05D001889 ORTHO05D001853 3.2e-09 65.1 78 43.6
Gorai.007G109200 Gossypium raimondii HOM05D001889 ORTHO05D001853 3.2e-09 65.1 84 47.6
COL.COLO4_06276 Corchorus olitorius HOM05D001889 ORTHO05D001853 4.2e-09 64.7 84 45.2
Atru.chr5.680 Acer truncatum HOM05D001889 ORTHO05D001853 1.2e-08 63.2 72 50.0
CANSAT56G4277 Cannabis sativa HOM05D001889 ORTHO05D001853 1.6e-08 62.8 76 47.4
EL10Ac1g00257 Beta vulgaris HOM05D001889 ORTHO05D001853 2.1e-08 62.4 76 40.8
Prupe.2G189900 Prunus persica HOM05D001889 ORTHO05D001853 2.7e-08 62.0 72 47.2
Sabra02G0140800 Salix brachista HOM05D001889 ORTHO05D001853 2.7e-08 62.0 99 38.4
Cfa003792 Carpinus fangiana HOM05D001889 ORTHO05D001853 3.5e-08 61.6 73 45.2
Haze_15668 Corylus avellana HOM05D001889 ORTHO05D001853 3.5e-08 61.6 73 45.2
MD01G1082500 Malus domestica HOM05D001889 ORTHO05D001853 3.5e-08 61.6 72 47.2
Potri.002G171900 Populus trichocarpa HOM05D001889 ORTHO05D001853 6.0e-08 60.8 99 37.4
Lj1g0012362 Lotus japonicus HOM05D001889 ORTHO05D001853 1.0e-07 60.1 75 45.3
AUR62023450 Chenopodium quinoa HOM05D001889 ORTHO05D001853 1.3e-07 59.7 67 46.3
Glyma.03G258000 Glycine max HOM05D001889 ORTHO05D001853 1.3e-07 59.7 72 44.4
ClCG05G000760 Citrullus lanatus HOM05D001889 ORTHO05D000001 3.9e-07 58.2 71 47.9
Glyma.19G256500 Glycine max HOM05D001889 ORTHO05D001853 5.1e-07 57.8 72 41.7
Psat3g002320 Pisum sativum HOM05D001889 ORTHO05D001853 5.1e-07 57.8 72 47.2
arahy.Tifrunner.gnm1.ann1.JQ1PN1 Arachis hypogaea HOM05D001889 ORTHO05D001853 6.6e-07 57.4 87 44.8
VMungo0540G1992 Vigna mungo HOM05D001889 ORTHO05D001853 6.6e-07 57.4 88 42.0
RcHm_v2.0_Chr1g0359981 Rosa chinensis HOM05D001889 ORTHO05D001853 8.7e-07 57.0 76 40.8
CsaV3_3G007990 Cucumis sativus L. HOM05D001889 ORTHO05D001853 1.5e-06 56.2 71 47.9
Manes.05G022100 Manihot esculenta HOM05D001889 ORTHO05D001853 1.9e-06 55.8 76 43.4
Sed0013045 Sechium edule HOM05D001889 ORTHO05D001853 1.9e-06 55.8 92 38.0
Hund27191 Selenicereus undatus HOM05D001889 ORTHO05D001853 1.9e-06 55.8 72 41.7
Sopen03g023860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 55.8 82 40.2
arahy.Tifrunner.gnm1.ann1.QJF382 Arachis hypogaea HOM05D001889 ORTHO05D001853 2.5e-06 55.5 87 43.7
BraA09t35757Z Brassica rapa HOM05D001889 ORTHO05D001853 2.5e-06 55.5 72 38.9
Prupe.2G191700 Prunus persica HOM05D001889 ORTHO05D001853 2.5e-06 55.5 74 43.2
Sopen01g009470 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 39.0
Sopen01g031800 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 39.0
Sopen01g049130 Solanum pennellii HOM05D006380 ORTHO05D008400 2.5e-06 55.5 82 39.0
Sopen05g030490 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 39.0
Sopen08g007360 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 39.0
Sopen09g011150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 39.0
Sopen09g015540 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 39.0
Sopen10g015690 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 55.5 82 39.0
QL04p060477 Quercus lobata HOM05D001889 ORTHO05D001853 4.3e-06 54.7 87 37.9
Phvul.006G113800 Phaseolus vulgaris HOM05D001889 ORTHO05D001853 5.6e-06 54.3 88 40.9
Ah.05g179470 Amaranthus hybridus HOM05D001889 ORTHO05D001853 7.3e-06 53.9 66 36.4
FvH4_7g16761 Fragaria vesca HOM05D001889 ORTHO05D001853 7.3e-06 53.9 72 40.3
A09p00300 Brassica napus HOM05D001889 ORTHO05D001853 9.6e-06 53.5 72 37.5
Sc01g0002620 Simmondsia chinensis HOM05D001889 ORTHO05D001853 9.6e-06 53.5 61 41.0
Sopen03g020200 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-06 53.5 82 37.8
THA.LOC104801367 Tarenaya hassleriana HOM05D001889 ORTHO05D001853 9.6e-06 53.5 103 36.9


User provided reference genes

Program Settings