Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012949g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 3.8e-97 358.2 188 100.0
Nitab4.5_0001343g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 3.5e-82 308.5 188 89.9
Nitab4.5_0000018g0170 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.1e-59 233.8 192 75.0
PGSC0003DMG400015899 Solanum tuberosum HOM05D007681 ORTHO05D009734 2.4e-43 179.5 188 58.0
Solyc05g026570.3 Solanum lycopersicum HOM05D007681 ORTHO05D009734 7.0e-43 177.9 188 56.9
Sopen05g023100 Solanum pennellii HOM05D007681 ORTHO05D009734 2.7e-42 176.0 175 61.7
Oeu063591.1 Olea europaea HOM05D007681 ORTHO05D009734 1.5e-40 170.2 188 51.6
Peaxi162Scf00376g00013 Petunia axillaris HOM05D007681 ORTHO05D009734 1.2e-39 167.2 192 57.3
Actinidia36647 Actinidia chinensis HOM05D007681 ORTHO05D009734 1.5e-37 160.2 184 51.1
Dinv28046 Davidia involucrata HOM05D007681 ORTHO05D009734 3.7e-36 155.6 132 61.4
Hma1.2p1_0330F.1_g127440 Hydrangea macrophylla HOM05D007681 ORTHO05D009734 6.4e-36 154.8 132 61.4
Lsat_1_v5_gn_8_44280 Lactuca sativa HOM05D007681 ORTHO05D009734 9.2e-35 151.0 188 51.1
ECA233G2077 Erigeron canadensis HOM05D007681 ORTHO05D009734 5.1e-33 145.2 159 52.2
Migut.L00587 Erythranthe guttata HOM05D007681 ORTHO05D009734 5.6e-32 141.7 186 48.9
HanXRQChr12g0363581 Helianthus annuus HOM05D007681 ORTHO05D009734 9.5e-32 141.0 195 50.8
TAR629G0584 Trochodendron aralioides HOM05D007681 ORTHO05D009734 4.7e-31 138.7 163 49.7
MSTRG.7616 Avicennia marina HOM05D007681 ORTHO05D009734 4.0e-30 135.6 173 46.2
Rhsim09G0093700 Rhododendron simsii HOM05D007681 ORTHO05D009734 8.9e-30 134.4 129 55.8
Cfa014982 Carpinus fangiana HOM05D007681 ORTHO05D009734 4.9e-28 128.6 191 44.5
Nn3g18293 Nelumbo nucifera HOM05D007681 ORTHO05D009734 8.4e-28 127.9 128 53.1
AUR62026755 Chenopodium quinoa HOM05D007681 ORTHO05D009734 5.4e-27 125.2 184 44.0
PSO017G3157 Papaver somniferum HOM05D007681 ORTHO05D009734 2.1e-26 123.2 139 47.5
EL10Ac1g01492 Beta vulgaris HOM05D007681 ORTHO05D009734 1.7e-25 120.2 154 42.2
Eucgr.B02939 Eucalyptus grandis HOM05D007681 ORTHO05D009734 1.7e-25 120.2 185 38.9
Gohir.1Z015700 Gossypium hirsutum HOM05D007681 ORTHO05D009734 3.0e-25 119.4 128 50.0
Gohir.A01G150154 Gossypium hirsutum HOM05D007681 ORTHO05D009734 3.0e-25 119.4 128 50.0
unitig_26.g8951 Utricularia gibba HOM05D007681 ORTHO05D009734 3.0e-25 119.4 141 49.6
Gorai.002G176600 Gossypium raimondii HOM05D007681 ORTHO05D009734 3.9e-25 119.0 128 49.2
PSO478G3571 Papaver somniferum HOM05D007681 ORTHO05D009734 5.1e-25 118.6 188 39.4
TWI77G0184 Tripterygium wilfordii HOM05D007681 ORTHO05D009734 2.5e-24 116.3 130 48.5
Gohir.D01G143200 Gossypium hirsutum HOM05D007681 ORTHO05D009734 3.3e-24 115.9 128 48.4
GSVIVG01011705001 Vitis vinifera HOM05D007681 ORTHO05D009734 4.3e-24 115.5 169 43.8
CiPaw.06G048600 Carya illinoinensis HOM05D007681 ORTHO05D009734 5.6e-24 115.2 188 41.0
AUR62013520 Chenopodium quinoa HOM05D007681 ORTHO05D009734 5.6e-24 115.2 182 40.7
Cpa.g.sc2.238 Carica papaya HOM05D007681 ORTHO05D009734 9.6e-24 114.4 186 38.7
Lj6A742G71 Lonicera japonica HOM05D007681 ORTHO05D009734 1.2e-23 114.0 88 59.1
Aqoxy3G00048 Aquilegia oxysepala HOM05D007681 ORTHO05D009734 1.1e-22 110.9 163 41.7
Ciclev10016943m.g Citrus clementina HOM05D007681 ORTHO05D009734 2.4e-22 109.8 172 39.5
Thecc.02G287600 Theobroma cacao HOM05D007681 ORTHO05D009734 2.4e-22 109.8 178 38.2
PGR102G0336 Punica granatum HOM05D007681 ORTHO05D009734 4.0e-22 109.0 176 41.5
Atru.chr11.647 Acer truncatum HOM05D007681 ORTHO05D009734 2.0e-21 106.7 155 41.9
ClCG07G005970 Citrullus lanatus HOM05D007681 ORTHO05D009734 9.9e-21 104.4 183 37.2
CsaV3_5G014700 Cucumis sativus L. HOM05D007681 ORTHO05D009734 9.9e-21 104.4 189 38.6
Manes.15G131200 Manihot esculenta HOM05D007681 ORTHO05D009734 1.7e-20 103.6 179 36.3
Prupe.1G330200 Prunus persica HOM05D007681 ORTHO05D009734 8.4e-20 101.3 167 42.5
Sp2g13030 Schrenkiella parvula HOM05D007681 ORTHO05D009734 1.9e-19 100.1 175 36.6
BolC2t11054H Brassica oleracea HOM05D007681 ORTHO05D009734 2.4e-19 99.8 163 34.4
Carub.0005s0053 Capsella rubella HOM05D007681 ORTHO05D009734 2.4e-19 99.8 183 36.6
Sed0010427 Sechium edule HOM05D007681 ORTHO05D009734 2.4e-19 99.8 187 36.4
MD13G1021700 Malus domestica HOM05D007681 ORTHO05D009734 3.2e-19 99.4 157 41.4
A02p32170 Brassica napus HOM05D007681 ORTHO05D009734 4.2e-19 99.0 166 35.5
CARHR144140 Cardamine hirsuta HOM05D007681 ORTHO05D009734 5.4e-19 98.6 164 36.6
Thhalv10005039m.g Eutrema salsugineum HOM05D007681 ORTHO05D009734 5.4e-19 98.6 165 35.8
BcaC03g17055 Brassica carinata HOM05D007681 ORTHO05D009734 1.6e-18 97.1 173 34.1
Psat6g044480 Pisum sativum HOM05D007681 ORTHO05D009734 1.6e-18 97.1 135 44.4
Sabra10G0080500 Salix brachista HOM05D007681 ORTHO05D009734 2.1e-18 96.7 191 38.2
BraA02t08231Z Brassica rapa HOM05D007681 ORTHO05D009734 2.7e-18 96.3 175 34.3
C02p49750 Brassica napus HOM05D007681 ORTHO05D009734 3.5e-18 95.9 173 33.5
BcaB07g30389 Brassica carinata HOM05D007681 ORTHO05D009734 4.6e-18 95.5 190 32.6
Aa31LG2G8310 Aethionema arabicum HOM05D007681 ORTHO05D009734 6.0e-18 95.1 187 34.8
AL5G10680 Arabidopsis lyrata HOM05D007681 ORTHO05D009734 6.0e-18 95.1 176 36.4
Ca_12590_v3 Cicer arietinum L. HOM05D007681 ORTHO05D009734 1.0e-17 94.4 188 35.1
Lalb_Chr10g0095991 Lupinus albus HOM05D007681 ORTHO05D009734 1.0e-17 94.4 167 38.9
Lj5g0022624 Lotus japonicus HOM05D007681 ORTHO05D009734 1.3e-17 94.0 194 35.1
AT2G01590 Arabidopsis thaliana HOM05D007681 ORTHO05D009734 2.3e-17 93.2 177 34.5
Glyma.07G166400 Glycine max HOM05D007681 ORTHO05D009734 2.3e-17 93.2 193 35.2
TPR.G36897 Trifolium pratense HOM05D007681 ORTHO05D009734 3.0e-17 92.8 181 38.1
CANSAT01G2988 Cannabis sativa HOM05D007681 ORTHO05D009734 3.9e-17 92.4 149 40.9
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.9e-16 90.1 89 49.4
Medtr1g031740 Medicago truncatula HOM05D007681 ORTHO05D009734 1.9e-16 90.1 166 38.0
Potri.010G110100 Populus trichocarpa HOM05D007681 ORTHO05D009734 4.3e-16 89.0 141 40.4
Ah.01g006360 Amaranthus hybridus HOM05D007681 ORTHO05D009734 5.6e-16 88.6 165 38.8
Lj2g0022739 Lotus japonicus HOM05D007681 ORTHO05D009734 1.6e-15 87.0 189 33.9
MBI16_g06252_MAGBIO Magnolia biondii HOM05D007681 ORTHO05D009734 1.6e-15 87.0 80 56.2
CAN.G1740.4 Capsicum annuum HOM05D007681 ORTHO05D009734 2.8e-15 86.3 81 66.7
arahy.Tifrunner.gnm1.ann1.2VU2GF Arachis hypogaea HOM05D007681 ORTHO05D009734 3.6e-15 85.9 89 49.4
RcHm_v2.0_Chr4g0443571 Rosa chinensis HOM05D007681 ORTHO05D009734 6.2e-15 85.1 153 41.2
FvH4_4g34062 Fragaria vesca HOM05D007681 ORTHO05D009734 8.1e-15 84.7 151 40.4
FAN17G1502 Fragaria x ananassa HOM05D007681 ORTHO05D009734 1.1e-14 84.3 159 38.4
arahy.Tifrunner.gnm1.ann1.W0FD01 Arachis hypogaea HOM05D007681 ORTHO05D009734 6.9e-14 81.6 84 50.0
FAN22G1679 Fragaria x ananassa HOM05D007681 ORTHO05D009734 6.9e-14 81.6 167 37.7
Phvul.003G022100 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 4.5e-13 79.0 170 33.5
Os09g0306650 Oryza sativa ssp. japonica HOM05D007681 ORTHO05D009734 1.7e-12 77.0 138 35.5
Phvul.005G062000 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 2.7e-10 69.7 68 48.5
Zm00001eb309450 Zea mays HOM05D007681 ORTHO05D009734 2.3e-09 66.6 130 33.8
THA.LOC104805073 Tarenaya hassleriana HOM05D007681 ORTHO05D009734 2.5e-08 63.2 136 33.1
Hund26715 Selenicereus undatus HOM05D007681 ORTHO05D009734 1.4e-06 57.4 88 36.4
vmacro10664 Vaccinium macrocarpon HOM05D007681 ORTHO05D009734 2.4e-06 56.6 42 64.3
MELO3C026423.2 Cucumis melo HOM05D007681 ORTHO05D009734 5.3e-06 55.5 138 34.8


User provided reference genes

Program Settings