Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012943g0020 Nicotiana tabacum HOM05D007920 ORTHO05D009993 1.4e-57 226.1 115 100.0
Nitab4.5_0001454g0110 Nicotiana tabacum HOM05D001080 ORTHO05D009993 2.4e-54 215.3 112 96.4
Sopen03g035960 Solanum pennellii HOM05D007920 ORTHO05D009993 4.8e-50 201.1 115 88.7
PGSC0003DMG400014190 Solanum tuberosum HOM05D007920 ORTHO05D009993 7.6e-48 193.7 115 85.2
Lj5C79G1 Lonicera japonica HOM05D007920 ORTHO05D009993 5.1e-36 154.5 115 68.7
Hma1.2p1_0109F.1_g052370 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 1.3e-34 149.8 116 67.2
Oeu060125.1 Olea europaea HOM05D007920 ORTHO05D009993 4.8e-34 147.9 117 67.5
Migut.D01101 Erythranthe guttata HOM05D007920 ORTHO05D009993 1.1e-33 146.7 115 66.1
SalBow6G6899 Salvia bowleyana HOM05D007920 ORTHO05D009993 1.2e-32 143.3 117 62.4
Actinidia36878 Actinidia chinensis HOM05D007920 ORTHO05D009993 2.0e-32 142.5 115 66.1
SalBow6G4591 Salvia bowleyana HOM05D007920 ORTHO05D009993 2.6e-32 142.1 117 61.5
MSTRG.9407 Avicennia marina HOM05D007920 ORTHO05D009993 7.6e-32 140.6 117 63.2
TAR383G1062 Trochodendron aralioides HOM05D007920 ORTHO05D009993 2.9e-31 138.7 115 60.9
Rhsim12G0188100 Rhododendron simsii HOM05D007920 ORTHO05D009993 1.6e-29 132.9 115 59.1
Cc04_g04970 Coffea canephora HOM05D007920 ORTHO05D009993 2.1e-29 132.5 117 61.5
Nn8g39812 Nelumbo nucifera HOM05D007920 ORTHO05D009993 2.7e-29 132.1 115 57.4
CANSAT56G1317 Cannabis sativa HOM05D007920 ORTHO05D009993 8.7e-28 127.1 94 66.0
HanXRQChr09g0274501 Helianthus annuus HOM05D007920 ORTHO05D009993 1.1e-27 126.7 107 59.8
QL05p035351 Quercus lobata HOM05D007920 ORTHO05D009993 1.1e-27 126.7 103 60.2
HanXRQChr05g0154421 Helianthus annuus HOM05D007920 ORTHO05D009993 1.9e-27 125.9 107 59.8
FAN09G3519 Fragaria x ananassa HOM05D007920 ORTHO05D009993 4.3e-27 124.8 115 57.4
MD17G1221700 Malus domestica HOM05D007920 ORTHO05D009993 7.4e-27 124.0 115 57.4
FAN05G5030 Fragaria x ananassa HOM05D007920 ORTHO05D009993 9.6e-27 123.6 115 56.5
FvH4_6g28800 Fragaria vesca HOM05D007920 ORTHO05D009993 1.3e-26 123.2 115 56.5
SGA_v2.0_scaffold117G32314 Striga asiatica HOM05D007920 ORTHO05D009993 1.3e-26 123.2 116 57.8
FAN02G0847 Fragaria x ananassa HOM05D007920 ORTHO05D009993 3.7e-26 121.7 115 55.7
Prupe.3G096700 Prunus persica HOM05D007920 ORTHO05D009993 3.7e-26 121.7 94 64.9
Lsat_1_v5_gn_4_87000 Lactuca sativa HOM05D007920 ORTHO05D009993 4.8e-26 121.3 118 57.6
unitig_736.g22804 Utricularia gibba HOM05D000537 ORTHO05D000776 4.8e-26 121.3 111 52.3
Aqoxy7G03460 Aquilegia oxysepala HOM05D007920 ORTHO05D009993 1.8e-25 119.4 116 52.6
TWI12G0021 Tripterygium wilfordii HOM05D007920 ORTHO05D009993 1.8e-25 119.4 99 58.6
AT1G15900 Arabidopsis thaliana HOM05D007920 ORTHO05D009993 2.4e-25 119.0 94 63.8
CSS0007854 Camellia sinensis var. sinensis HOM05D007920 ORTHO05D009993 3.1e-25 118.6 97 64.9
CARHR016410 Cardamine hirsuta HOM05D007920 ORTHO05D009993 3.1e-25 118.6 110 56.4
ECA232G4957 Erigeron canadensis HOM05D007920 ORTHO05D009993 3.1e-25 118.6 106 57.5
ATR0559G078 Amborella trichopoda HOM05D007920 ORTHO05D009993 4.1e-25 118.2 95 57.9
Duzib192G0651 Durio zibethinus HOM05D007920 ORTHO05D009993 4.1e-25 118.2 97 59.8
RcHm_v2.0_Chr2g0133221 Rosa chinensis HOM05D007920 ORTHO05D009993 5.3e-25 117.9 115 53.9
Cpa.g.sc10.92 Carica papaya HOM05D007920 ORTHO05D009993 6.9e-25 117.5 105 58.1
PGR031G3888 Punica granatum HOM05D007920 ORTHO05D009993 6.9e-25 117.5 118 56.8
ClCG07G012110 Citrullus lanatus HOM05D007920 ORTHO05D009993 1.5e-24 116.3 116 53.4
Sabra01G0032500 Salix brachista HOM05D001994 ORTHO05D001954 2.6e-24 115.5 105 57.1
Aa31LG7G480 Aethionema arabicum HOM05D007920 ORTHO05D009993 3.4e-24 115.2 111 55.0
ClCG00G003920 Citrullus lanatus HOM05D007920 ORTHO05D009993 3.4e-24 115.2 97 60.8
Gohir.D09G090800 Gossypium hirsutum HOM05D007920 ORTHO05D009993 3.4e-24 115.2 92 60.9
MELO3C017832.2 Cucumis melo HOM05D007920 ORTHO05D009993 4.5e-24 114.8 95 60.0
Thecc.06G039600 Theobroma cacao HOM05D007920 ORTHO05D009993 4.5e-24 114.8 93 62.4
AL1G28072 Arabidopsis lyrata HOM05D007920 ORTHO05D009993 7.6e-24 114.0 94 58.5
Gorai.006G107000 Gossypium raimondii HOM05D007920 ORTHO05D009993 7.6e-24 114.0 111 55.0
Cfa000225 Carpinus fangiana HOM05D007920 ORTHO05D009993 1.0e-23 113.6 110 51.8
Potri.001G046900 Populus trichocarpa HOM05D007920 ORTHO05D009993 1.0e-23 113.6 105 56.2
Sp1g14205 Schrenkiella parvula HOM05D007920 ORTHO05D009993 1.0e-23 113.6 101 56.4
C05p14120 Brassica napus HOM05D000537 ORTHO05D000415 1.3e-23 113.2 100 57.0
BolC5t30143H Brassica oleracea HOM05D000537 ORTHO05D000415 1.3e-23 113.2 100 57.0
A06p11940 Brassica napus HOM05D000537 ORTHO05D000415 2.2e-23 112.5 91 60.4
Lalb_Chr14g0374051 Lupinus albus HOM05D007920 ORTHO05D009993 2.2e-23 112.5 104 57.7
BraA06t24364Z Brassica rapa HOM05D000537 ORTHO05D000415 2.9e-23 112.1 91 59.3
Ca_01022_v3 Cicer arietinum L. HOM05D007920 ORTHO05D009993 3.8e-23 111.7 103 55.3
CsaV3_4G002040 Cucumis sativus L. HOM05D001994 ORTHO05D001954 3.8e-23 111.7 95 58.9
THA.LOC104808181 Tarenaya hassleriana HOM05D007920 ORTHO05D009993 3.8e-23 111.7 90 61.1
CiPaw.01G253600 Carya illinoinensis HOM05D007920 ORTHO05D009993 5.0e-23 111.3 94 60.6
Medtr2g104930 Medicago truncatula HOM05D007920 ORTHO05D009993 5.0e-23 111.3 106 50.9
Psat5g304800 Pisum sativum HOM05D007920 ORTHO05D009993 6.5e-23 110.9 94 55.3
Lj3g0004979 Lotus japonicus HOM05D007920 ORTHO05D009993 1.1e-22 110.2 97 55.7
Manes.11G065050 Manihot esculenta HOM05D007920 ORTHO05D009993 1.1e-22 110.2 93 60.2
Carub.0001s1570 Capsella rubella HOM05D007920 ORTHO05D009993 2.5e-22 109.0 91 58.2
Sed0007883 Sechium edule HOM05D001994 ORTHO05D001954 3.2e-22 108.6 108 51.9
Gohir.A09G090800 Gossypium hirsutum HOM05D007920 ORTHO05D009993 1.2e-21 106.7 92 57.6
SHI00232 Sapria himalayana HOM05D007920 ORTHO05D009993 1.2e-21 106.7 90 56.7
Lalb_Chr24g0395321 Lupinus albus HOM05D007920 ORTHO05D009993 1.6e-21 106.3 101 55.4
Ciclev10026801m.g Citrus clementina HOM05D007920 ORTHO05D009993 2.1e-21 105.9 92 60.9
Thhalv10009838m.g Eutrema salsugineum HOM05D007920 ORTHO05D009993 6.1e-21 104.4 97 55.7
Glyma.15G004000 Glycine max HOM05D007920 ORTHO05D009993 1.0e-20 103.6 113 50.4
Sc12g0008420 Simmondsia chinensis HOM05D007920 ORTHO05D009993 1.8e-20 102.8 90 54.4
FAN14G5942 Fragaria x ananassa HOM05D007920 ORTHO05D009993 3.9e-20 101.7 114 49.1
arahy.Tifrunner.gnm1.ann1.D8WECR Arachis hypogaea HOM05D007920 ORTHO05D009993 8.7e-20 100.5 90 55.6
Phvul.005G182500 Phaseolus vulgaris HOM05D007920 ORTHO05D009993 3.7e-18 95.1 111 52.3
HPP92_000037 Vanilla planifolia HOM05D001122 ORTHO05D001877 3.7e-18 95.1 92 50.0
VMungo1080G1626 Vigna mungo HOM05D007920 ORTHO05D009993 8.2e-18 94.0 119 47.9
Zm00001eb278260 Zea mays HOM05D007920 ORTHO05D009993 5.3e-17 91.3 86 55.8
SEGI_11378 Sequoiadendron giganteum HOM05D007920 ORTHO05D009993 9.0e-17 90.5 92 53.3
Sc02g0006940 Simmondsia chinensis HOM05D007920 ORTHO05D009993 2.9e-15 85.5 93 49.5
COL.COLO4_26676 Corchorus olitorius HOM05D007920 ORTHO05D009993 1.1e-14 83.6 69 63.8
Ah.01g006840 Amaranthus hybridus HOM05D007920 ORTHO05D009993 5.5e-14 81.3 88 47.7
Mapoly0046s0029 Marchantia polymorpha HOM05D007920 ORTHO05D009993 1.2e-13 80.1 112 42.9
TPR.G36324 Trifolium pratense HOM05D007920 ORTHO05D009993 5.1e-12 74.7 81 46.9
MD16G1196200 Malus domestica HOM05D007920 ORTHO05D009993 2.8e-10 68.9 84 46.4
Hma1.2p1_0586F.1_g183770 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 5.0e-07 58.2 74 45.9
Hma1.2p1_1595F.1_g292725 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 1.4e-06 56.6 55 58.2


User provided reference genes

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