Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 6.3e-100 367.5 188 100.0
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 3.7e-84 315.1 175 92.6
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 8.6e-65 250.8 180 75.6
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 3.2e-64 248.8 180 75.6
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 1.6e-63 246.5 174 75.9
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 3.5e-42 175.6 177 58.8
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 5.0e-41 171.8 172 57.0
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 2.5e-40 169.5 176 55.1
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 3.3e-40 169.1 126 74.6
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 2.8e-39 166.0 132 73.5
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.8e-38 163.3 176 54.5
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.8e-38 163.3 176 54.0
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 2.3e-38 162.9 178 54.5
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 9.9e-37 157.5 173 50.9
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.4e-35 153.7 181 51.4
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.9e-35 153.3 178 51.7
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.9e-35 153.3 173 53.8
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.9e-35 153.3 181 50.8
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 2.4e-35 152.9 180 53.3
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 5.4e-35 151.8 178 50.6
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 2.1e-34 149.8 175 50.3
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 2.7e-34 149.4 174 52.9
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 3.5e-34 149.1 178 51.7
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 4.6e-34 148.7 170 51.8
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 1.0e-33 147.5 180 50.0
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 6.6e-33 144.8 181 49.2
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 6.6e-33 144.8 173 50.9
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 6.6e-33 144.8 173 50.9
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.5e-32 143.7 179 49.2
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.9e-32 143.3 166 51.2
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 4.3e-32 142.1 180 52.2
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 2.8e-31 139.4 177 48.0
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 3.6e-31 139.0 176 50.0
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 8.1e-31 137.9 172 52.3
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 5.2e-30 135.2 185 48.6
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.8e-30 134.8 164 47.0
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 1.5e-29 133.7 164 48.8
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 2.0e-29 133.3 168 46.4
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.0e-29 133.3 175 45.1
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-29 132.9 165 47.3
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 7.6e-29 131.3 169 48.5
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.7e-28 130.2 164 47.0
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.7e-28 130.2 164 47.6
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.7e-28 130.2 171 45.6
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 4.9e-28 128.6 169 49.1
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 4.9e-28 128.6 172 47.1
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 8.4e-28 127.9 191 45.0
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.1e-27 127.5 165 44.2
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.9e-27 126.7 179 46.4
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 1.6e-26 123.6 170 44.1
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 4.6e-26 122.1 172 44.8
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 7.8e-26 121.3 173 46.8
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 1.3e-25 120.6 175 45.1
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.7e-25 120.2 166 46.4
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 3.9e-25 119.0 174 44.3
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 3.9e-25 119.0 174 44.3
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 3.9e-25 119.0 171 43.9
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 5.1e-25 118.6 174 42.5
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 5.1e-25 118.6 169 46.2
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 6.6e-25 118.2 172 44.2
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 8.6e-25 117.9 175 46.9
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 1.1e-24 117.5 190 42.1
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 2.5e-24 116.3 171 44.4
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 3.3e-24 115.9 169 47.9
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 3.3e-24 115.9 183 44.3
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 5.6e-24 115.2 182 45.1
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 5.6e-24 115.2 183 41.5
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 7.3e-24 114.8 215 40.0
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 9.6e-24 114.4 173 46.2
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 2.1e-23 113.2 171 42.7
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 2.1e-23 113.2 171 42.7
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 2.1e-23 113.2 171 44.4
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 2.8e-23 112.8 182 39.6
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 4.7e-23 112.1 177 41.2
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.1e-22 110.9 176 40.3
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 1.1e-22 110.9 179 39.1
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.4e-22 110.5 167 46.1
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 2.4e-22 109.8 191 43.5
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 5.2e-22 108.6 171 42.1
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 6.9e-22 108.2 197 41.6
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 9.0e-22 107.8 174 40.8
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 9.0e-22 107.8 174 43.1
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 2.0e-21 106.7 187 40.1
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.4e-21 105.5 171 38.6
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 9.9e-21 104.4 181 40.3
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 4.9e-20 102.1 153 43.1
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 5.4e-19 98.6 183 39.3
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 7.1e-19 98.2 178 43.3
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 6.0e-18 95.1 184 40.8
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 2.1e-15 86.7 173 36.4
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 4.8e-15 85.5 167 40.7
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.4e-14 84.0 194 37.1
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.8e-14 83.6 197 38.1
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 5.3e-14 82.0 184 36.4
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 9.0e-14 81.3 189 35.4
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.5e-13 80.5 80 55.0
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.5e-13 80.5 118 44.9
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 2.6e-13 79.7 108 43.5
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 7.6e-13 78.2 176 33.5
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 7.6e-13 78.2 111 42.3
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 7.6e-13 78.2 182 34.1
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 2.2e-12 76.6 165 37.0
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 6.4e-12 75.1 78 55.1
SHI16262 Sapria himalayana HOM05D006456 ORTHO05D007588 6.4e-12 75.1 194 32.0
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 1.1e-11 74.3 86 48.8
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.6e-10 70.5 174 32.8
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 3.5e-10 69.3 98 43.9
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 3.5e-10 69.3 96 44.8
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.3e-09 67.4 197 33.0
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.1e-06 57.8 105 42.9


User provided reference genes

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