Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.0e-84 316.2 222 100.0
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 5.2e-45 185.3 106 92.5
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 9.8e-44 181.0 105 90.5
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 1.7e-43 180.3 105 89.5
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 3.9e-40 169.1 100 90.0
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 1.1e-39 167.5 106 85.8
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 5.6e-39 165.2 103 83.5
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.8e-37 160.2 106 77.4
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 3.1e-37 159.5 102 80.4
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 3.1e-37 159.5 102 80.4
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 5.8e-36 155.2 104 75.0
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 7.5e-36 154.8 105 73.3
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.3e-35 154.1 104 75.0
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 3.7e-35 152.5 111 71.2
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 6.4e-35 151.8 102 77.5
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 8.3e-35 151.4 103 73.8
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.1e-34 151.0 102 74.5
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 1.9e-34 150.2 105 73.3
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.9e-34 150.2 104 73.1
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 2.4e-34 149.8 103 74.8
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 3.2e-34 149.4 111 70.3
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 4.1e-34 149.1 103 73.8
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 5.4e-34 148.7 111 70.3
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 7.1e-34 148.3 107 71.0
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 2.7e-33 146.4 103 72.8
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 2.7e-33 146.4 103 73.8
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 2.7e-33 146.4 105 74.3
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 2.7e-33 146.4 111 68.5
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 3.5e-33 146.0 104 74.0
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 4.6e-33 145.6 100 76.0
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 6.0e-33 145.2 111 64.9
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 6.0e-33 145.2 104 73.1
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.0e-32 144.4 181 66.3
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 1.7e-32 143.7 103 70.9
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 1.7e-32 143.7 111 67.6
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 2.3e-32 143.3 103 69.9
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 2.3e-32 143.3 141 59.6
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 2.3e-32 143.3 98 72.4
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 3.0e-32 142.9 111 64.9
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 3.9e-32 142.5 104 72.1
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 3.9e-32 142.5 110 68.2
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 3.9e-32 142.5 98 72.4
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 5.1e-32 142.1 100 72.0
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 8.6e-32 141.4 103 70.9
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.5e-31 140.6 102 71.6
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 1.5e-31 140.6 104 68.3
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.9e-31 140.2 101 72.3
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 1.9e-31 140.2 112 64.3
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 2.5e-31 139.8 104 70.2
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 2.5e-31 139.8 106 67.9
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.3e-31 139.4 103 69.9
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 4.3e-31 139.0 104 68.3
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 4.3e-31 139.0 105 68.6
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 4.3e-31 139.0 111 64.9
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 5.6e-31 138.7 105 65.7
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 9.5e-31 137.9 97 74.2
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.2e-30 137.5 113 63.7
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 1.2e-30 137.5 104 65.4
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 2.1e-30 136.7 132 59.1
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 6.2e-30 135.2 104 66.3
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 6.2e-30 135.2 111 64.0
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.4e-29 134.0 102 63.7
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.4e-29 134.0 113 63.7
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.3e-29 133.3 101 65.3
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 3.1e-29 132.9 103 65.0
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 3.1e-29 132.9 106 67.0
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 4.0e-29 132.5 97 70.1
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 5.2e-29 132.1 135 56.3
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 5.2e-29 132.1 104 64.4
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.2e-29 132.1 104 64.4
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.2e-29 132.1 104 63.5
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 8.9e-29 131.3 190 51.6
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 8.9e-29 131.3 104 63.5
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 1.2e-28 131.0 100 67.0
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.6e-28 129.8 104 63.5
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.7e-27 127.1 101 66.3
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 3.8e-27 125.9 105 60.0
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 3.8e-27 125.9 96 70.8
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 6.4e-27 125.2 98 65.3
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 6.4e-27 125.2 105 61.9
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 8.4e-27 124.8 103 62.1
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 8.4e-27 124.8 104 60.6
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.4e-26 124.0 105 61.9
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 2.4e-26 123.2 104 60.6
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 2.4e-26 123.2 104 60.6
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 3.2e-26 122.9 104 59.6
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 3.2e-26 122.9 104 61.5
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 3.2e-26 122.9 104 60.6
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 3.2e-26 122.9 104 61.5
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 3.2e-26 122.9 104 61.5
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 3.2e-26 122.9 104 61.5
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 3.2e-26 122.9 104 61.5
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 3.2e-26 122.9 104 59.6
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 5.4e-26 122.1 104 59.6
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 7.1e-26 121.7 101 60.4
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-25 120.9 103 62.1
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.2e-25 120.9 102 59.8
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.1e-25 120.2 100 68.0
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 3.5e-25 119.4 96 63.5
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 7.8e-25 118.2 97 66.0
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 7.8e-25 118.2 104 58.7
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.0e-24 117.9 96 63.5
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.3e-24 117.5 102 60.8
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-24 117.5 104 60.6
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.3e-24 117.5 99 61.6
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.3e-24 116.7 102 60.8
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 3.0e-24 116.3 103 58.3
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.5e-23 113.2 91 63.7
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 2.5e-23 113.2 95 62.1
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 4.3e-23 112.5 98 64.3
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 6.2e-22 108.6 78 71.8
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.4e-21 107.5 110 51.8
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 3.1e-21 106.3 102 56.9
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 3.1e-21 106.3 102 56.9
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 3.1e-21 106.3 102 56.9
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 3.1e-21 106.3 96 59.4
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 5.2e-21 105.5 103 54.4
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 5.2e-21 105.5 103 54.4
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 5.2e-21 105.5 103 54.4
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 6.9e-21 105.1 102 56.9
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 6.9e-21 105.1 102 56.9
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 8.9e-21 104.8 103 54.4
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 8.9e-21 104.8 103 54.4
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.6e-20 103.2 100 60.0
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 9.9e-20 101.3 113 54.0
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 1.3e-19 100.9 103 53.4
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.3e-19 100.9 70 74.3
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 3.8e-19 99.4 103 52.4
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.9e-18 97.1 104 52.9
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 1.9e-18 97.1 105 52.4
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 3.2e-18 96.3 102 52.9
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.7e-16 90.5 103 47.6
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 8.1e-14 81.6 96 45.8
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 1.1e-13 81.3 87 50.6
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 6.9e-13 78.6 103 47.6
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 6.9e-13 78.6 103 47.6
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 1.1e-07 61.2 60 58.3
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 7.4e-07 58.5 55 56.4


User provided reference genes

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