Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 1.9e-72 275.8 141 100.0
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 2.2e-65 252.3 138 92.0
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 3.6e-52 208.4 141 80.1
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 3.8e-49 198.4 142 71.8
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 3.9e-46 188.3 138 70.3
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 3.9e-46 188.3 143 69.9
Nitab4.5_0000106g0140 Nicotiana tabacum HOM05D005728 ORTHO05D005733 1.3e-36 156.8 144 61.8
Peaxi162Scf00101g00083 Petunia axillaris HOM05D005728 ORTHO05D005733 5.1e-30 134.8 140 55.7
Nitab4.5_0000196g0120 Nicotiana tabacum HOM05D005728 ORTHO05D005733 6.3e-28 127.9 143 53.8
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 1.1e-27 127.1 130 51.5
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.5e-26 123.2 141 48.9
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 2.9e-25 119.0 136 49.3
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 4.2e-24 115.2 138 49.3
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 5.5e-24 114.8 139 49.6
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 2.1e-23 112.8 138 46.4
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 3.6e-23 112.1 137 45.3
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 6.1e-23 111.3 139 44.6
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 7.9e-23 110.9 137 43.8
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 7.9e-23 110.9 138 45.7
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 1.0e-22 110.5 140 47.1
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 1.4e-22 110.2 129 47.3
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 2.3e-22 109.4 135 48.9
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 6.7e-22 107.8 138 46.4
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 1.1e-21 107.1 140 45.7
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 1.5e-21 106.7 142 45.1
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 1.5e-21 106.7 130 48.5
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 2.0e-21 106.3 141 44.0
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 3.3e-21 105.5 130 48.5
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 4.4e-21 105.1 135 43.0
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 5.7e-21 104.8 135 45.9
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 7.4e-21 104.4 139 43.9
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 9.7e-21 104.0 128 46.9
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 9.7e-21 104.0 142 45.8
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 1.3e-20 103.6 135 45.2
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 1.3e-20 103.6 137 46.0
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 1.7e-20 103.2 137 47.4
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 2.2e-20 102.8 133 45.1
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 2.8e-20 102.4 139 43.9
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 3.7e-20 102.1 142 47.2
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 4.8e-20 101.7 145 45.5
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 4.8e-20 101.7 145 45.5
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 4.8e-20 101.7 143 40.6
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 6.3e-20 101.3 143 39.9
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 6.3e-20 101.3 143 42.0
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.1e-19 100.5 145 44.8
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.1e-19 100.5 141 44.7
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 1.4e-19 100.1 139 45.3
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 1.8e-19 99.8 135 45.2
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 3.1e-19 99.0 145 44.1
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 5.3e-19 98.2 132 45.5
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 5.3e-19 98.2 142 45.8
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 6.9e-19 97.8 140 45.7
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 9.1e-19 97.4 136 43.4
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 1.2e-18 97.1 129 47.3
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 1.5e-18 96.7 141 44.0
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 1.5e-18 96.7 138 40.6
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 1.5e-18 96.7 129 43.4
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 2.0e-18 96.3 146 41.8
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 2.0e-18 96.3 141 41.8
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.6e-18 95.9 144 44.4
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 3.4e-18 95.5 124 42.7
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 4.5e-18 95.1 116 54.3
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 4.5e-18 95.1 135 42.2
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 5.9e-18 94.7 144 43.1
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 7.7e-18 94.4 140 45.0
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 7.7e-18 94.4 112 50.9
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 7.7e-18 94.4 137 43.8
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 1.0e-17 94.0 144 43.1
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 1.0e-17 94.0 130 43.8
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 1.3e-17 93.6 132 43.9
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 1.7e-17 93.2 130 43.8
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.2e-17 92.8 136 41.2
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 2.2e-17 92.8 133 39.8
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 3.8e-17 92.0 110 50.9
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 1.9e-16 89.7 131 41.2
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 3.2e-16 89.0 137 42.3
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 3.2e-16 89.0 137 40.1
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 4.2e-16 88.6 147 41.5
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 5.5e-16 88.2 136 43.4
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 5.5e-16 88.2 138 40.6
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 1.6e-15 86.7 138 44.9
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 2.1e-15 86.3 131 42.0
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 2.1e-15 86.3 130 40.8
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 2.7e-15 85.9 152 40.8
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 6.1e-15 84.7 139 39.6
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 1.4e-14 83.6 132 41.7
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 1.8e-14 83.2 129 41.9
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 1.8e-14 83.2 131 44.3
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 3.9e-14 82.0 137 39.4
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 1.1e-13 80.5 118 43.2
A07p18980 Brassica napus HOM05D005728 ORTHO05D005733 2.0e-13 79.7 114 44.7
BraA07t29603Z Brassica rapa HOM05D005728 ORTHO05D005733 2.0e-13 79.7 114 44.7
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 2.6e-13 79.3 114 43.9
C04p22970 Brassica napus HOM05D005728 ORTHO05D005733 3.3e-13 79.0 114 45.6
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 3.3e-13 79.0 114 39.5
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 4.4e-13 78.6 139 38.1
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 4.4e-13 78.6 134 42.5
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 5.7e-13 78.2 153 36.6
Thhalv10017443m.g Eutrema salsugineum HOM05D005728 ORTHO05D005733 7.4e-13 77.8 118 43.2
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 9.7e-13 77.4 144 36.8
BolC4t23791H Brassica oleracea HOM05D005728 ORTHO05D005733 2.2e-12 76.3 114 44.7
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 3.7e-12 75.5 132 34.8
arahy.Tifrunner.gnm1.ann1.5L1A31 Arachis hypogaea HOM05D005728 ORTHO05D005733 4.8e-12 75.1 135 36.3
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 6.3e-12 74.7 101 46.5
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 6.3e-12 74.7 127 39.4
Carub.0004s0935 Capsella rubella HOM05D005728 ORTHO05D005733 8.2e-12 74.3 118 42.4
BcaC02g08173 Brassica carinata HOM05D005728 ORTHO05D005733 1.1e-11 73.9 114 41.2
C04p57650 Brassica napus HOM05D005728 ORTHO05D005733 1.1e-11 73.9 114 41.2
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 1.1e-11 73.9 133 36.8
BolC4t27283H Brassica oleracea HOM05D005728 ORTHO05D005733 1.4e-11 73.6 114 40.4
A04p21550 Brassica napus HOM05D005728 ORTHO05D005733 3.1e-11 72.4 114 39.5
BraA04t17719Z Brassica rapa HOM05D005728 ORTHO05D005733 3.1e-11 72.4 114 39.5
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 3.1e-11 72.4 120 39.2
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 3.1e-11 72.4 134 39.6
AT2G28410 Arabidopsis thaliana HOM05D005728 ORTHO05D005733 4.1e-11 72.0 114 43.9
CARHR121360 Cardamine hirsuta HOM05D005728 ORTHO05D005733 4.1e-11 72.0 117 38.5
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.6e-10 70.1 120 38.3
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 2.6e-10 69.3 140 36.4
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 4.5e-10 68.6 121 43.0
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 5.9e-10 68.2 146 37.7
AL4G21610 Arabidopsis lyrata HOM05D005728 ORTHO05D005733 7.7e-10 67.8 114 43.0
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 7.7e-10 67.8 139 37.4
Sp4g11230 Schrenkiella parvula HOM05D005728 ORTHO05D005733 6.5e-09 64.7 115 35.7
Aa31LG5G7800 Aethionema arabicum HOM05D005728 ORTHO05D005733 1.5e-08 63.5 110 40.9
ATR0048G010 Amborella trichopoda HOM05D005728 ORTHO05D005733 1.6e-07 60.1 132 34.1
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 2.1e-07 59.7 115 37.4
A03p11060 Brassica napus HOM05D010860 ORTHO05D005733 4.7e-07 58.5 149 34.2
BraA03t10420Z Brassica rapa HOM05D010860 ORTHO05D005733 4.7e-07 58.5 149 34.2
BraA10t43864Z Brassica rapa HOM05D010860 ORTHO05D005733 1.4e-06 57.0 140 30.7
Gorai.003G141500 Gossypium raimondii HOM05D005728 ORTHO05D005733 3.0e-06 55.8 107 35.5


User provided reference genes

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