Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.0e-61 240.0 126 100.0
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.2e-57 226.5 121 96.7
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 1.2e-57 226.5 121 96.7
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 2.9e-56 221.9 126 89.7
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 6.4e-56 220.7 121 93.4
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 2.5e-52 208.8 114 93.0
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 3.6e-51 204.9 119 86.6
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 5.8e-49 197.6 121 84.3
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.2e-47 191.8 104 97.1
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 4.6e-46 188.0 121 79.3
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 6.0e-46 187.6 119 79.0
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 1.3e-45 186.4 119 79.0
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 2.3e-45 185.7 121 80.2
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.9e-45 184.9 121 74.4
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 8.6e-45 183.7 121 78.5
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.5e-44 183.0 126 80.2
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 5.6e-44 181.0 121 75.2
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 5.6e-44 181.0 121 75.2
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 2.1e-43 179.1 121 76.0
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 4.7e-43 177.9 121 72.7
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 4.7e-43 177.9 121 74.4
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 6.2e-43 177.6 121 71.9
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 6.2e-43 177.6 121 71.9
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 6.2e-43 177.6 121 72.7
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 6.2e-43 177.6 121 74.4
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 8.1e-43 177.2 121 75.2
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 8.1e-43 177.2 121 75.2
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 1.1e-42 176.8 121 75.2
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 1.1e-42 176.8 121 74.4
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.4e-42 176.4 121 76.0
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 5.2e-42 174.5 126 68.3
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 6.8e-42 174.1 121 72.7
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 6.8e-42 174.1 121 73.6
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.5e-41 172.9 121 72.7
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 2.0e-41 172.6 116 75.0
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 2.6e-41 172.2 121 69.4
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 2.6e-41 172.2 125 71.2
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 4.4e-41 171.4 121 69.4
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 5.8e-41 171.0 121 70.2
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 5.8e-41 171.0 123 72.4
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 5.8e-41 171.0 115 73.9
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 7.5e-41 170.6 125 67.2
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 7.5e-41 170.6 121 72.7
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.3e-40 169.9 111 75.7
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 1.7e-40 169.5 121 74.4
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 1.7e-40 169.5 111 74.8
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.2e-40 169.1 121 73.6
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 2.9e-40 168.7 121 70.2
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 3.7e-40 168.3 121 72.7
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 3.7e-40 168.3 123 71.5
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 6.4e-40 167.5 121 72.7
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 6.4e-40 167.5 116 73.3
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 8.3e-40 167.2 121 71.1
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 1.1e-39 166.8 121 70.2
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 1.4e-39 166.4 116 72.4
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 1.9e-39 166.0 121 67.8
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.9e-39 166.0 112 73.2
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 2.4e-39 165.6 112 73.2
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 4.1e-39 164.9 109 71.6
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 5.4e-39 164.5 114 72.8
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.2e-38 163.3 146 62.3
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.2e-38 163.3 101 80.2
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 1.6e-38 162.9 115 74.8
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 4.6e-38 161.4 114 71.1
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 6.0e-38 161.0 114 71.9
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 1.0e-37 160.2 121 71.9
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 1.7e-37 159.5 114 71.9
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.7e-37 159.5 121 67.8
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 1.7e-37 159.5 119 69.7
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 2.3e-37 159.1 114 72.8
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 3.9e-37 158.3 114 72.8
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 5.1e-37 157.9 112 69.6
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 6.6e-37 157.5 104 77.9
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 8.6e-37 157.1 104 77.9
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 8.6e-37 157.1 114 71.9
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 8.6e-37 157.1 114 71.1
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.9e-36 156.0 114 71.1
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 1.9e-36 156.0 116 66.4
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 2.5e-36 155.6 114 71.1
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 2.5e-36 155.6 98 74.5
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 3.3e-36 155.2 114 71.1
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 3.3e-36 155.2 114 71.1
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 4.3e-36 154.8 114 71.1
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 4.3e-36 154.8 123 66.7
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 4.3e-36 154.8 123 66.7
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 4.3e-36 154.8 104 77.9
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 4.3e-36 154.8 121 64.5
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 7.3e-36 154.1 115 70.4
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 1.2e-35 153.3 112 70.5
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.2e-35 153.3 121 66.1
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 6.2e-35 151.0 108 69.4
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 8.1e-35 150.6 111 66.7
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 2.3e-34 149.1 102 74.5
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 4.0e-34 148.3 112 70.5
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.2e-33 146.7 107 71.0
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 2.0e-33 146.0 108 63.9
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 2.0e-33 146.0 103 66.0
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 2.6e-33 145.6 104 67.3
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 3.4e-33 145.2 104 72.1
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 7.6e-33 144.1 89 80.9
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 7.6e-33 144.1 89 82.0
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 7.6e-33 144.1 103 65.0
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 9.9e-33 143.7 105 67.6
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 1.7e-32 142.9 110 68.2
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 2.2e-32 142.5 114 65.8
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 4.9e-32 141.4 104 64.4
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 4.9e-32 141.4 91 75.8
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 8.4e-32 140.6 107 68.2
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 1.4e-31 139.8 110 65.5
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.4e-31 139.8 109 66.1
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 1.9e-31 139.4 104 70.2
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 3.2e-31 138.7 104 69.2
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 3.2e-31 138.7 107 62.6
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 4.1e-31 138.3 104 68.3
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 5.4e-31 137.9 110 58.2
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.2e-30 136.7 100 70.0
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 2.1e-30 136.0 101 67.3
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 3.5e-30 135.2 104 64.4
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.0e-29 133.7 109 60.6
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 1.7e-29 132.9 99 70.7
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.3e-29 132.5 104 63.5
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 5.1e-29 131.3 105 61.9
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 2.5e-28 129.0 126 58.7
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 4.0e-26 121.7 70 90.0
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 8.9e-26 120.6 103 63.1
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 2.6e-25 119.0 101 56.4
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 3.4e-25 118.6 93 63.4
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.1e-23 113.6 75 78.7
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 7.8e-22 107.5 95 53.7
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.3e-21 106.7 109 54.1
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 4.8e-19 98.2 105 56.2
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.0e-17 92.8 60 75.0
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-15 87.0 66 63.6
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 2.1e-14 82.8 110 43.6
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.7e-13 79.7 66 60.6
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 2.4e-10 69.3 81 49.4
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.4e-10 69.3 52 61.5
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 9.9e-09 63.9 108 38.0
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 9.3e-07 57.4 99 31.3


User provided reference genes

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