Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012591g0010 Nicotiana tabacum HOM05D007649 ORTHO05D009668 5.2e-45 184.1 99 100.0
Nitab4.5_0000250g0070 Nicotiana tabacum HOM05D007649 ORTHO05D009668 8.6e-40 166.8 99 90.9
Peaxi162Scf00105g01010 Petunia axillaris HOM05D007649 ORTHO05D009668 2.0e-36 155.6 101 86.1
CAN.G1384.1 Capsicum annuum HOM05D007649 ORTHO05D009668 2.4e-34 148.7 99 84.8
Sopen08g021900 Solanum pennellii HOM05D007649 ORTHO05D009668 4.1e-34 147.9 95 84.2
Solyc08g067980.3 Solanum lycopersicum HOM05D007649 ORTHO05D009668 3.0e-29 131.7 106 72.6
Dinv30235 Davidia involucrata HOM05D007649 ORTHO05D009668 3.5e-25 118.2 101 63.4
GSVIVG01035747001 Vitis vinifera HOM05D007649 ORTHO05D009668 1.1e-23 113.2 79 69.6
HanXRQChr10g0313021 Helianthus annuus HOM05D007649 ORTHO05D009668 1.6e-22 109.4 95 62.1
PGR044G0128 Punica granatum HOM05D007649 ORTHO05D009668 8.0e-22 107.1 93 61.3
Cc08_g08160 Coffea canephora HOM05D007649 ORTHO05D009668 1.1e-21 106.7 93 58.1
CiPaw.08G016800 Carya illinoinensis HOM05D007649 ORTHO05D009668 1.4e-21 106.3 84 65.5
Actinidia13297 Actinidia chinensis HOM05D007649 ORTHO05D009668 1.8e-21 105.9 96 60.4
QL12p031020 Quercus lobata HOM05D007649 ORTHO05D009668 2.3e-21 105.5 86 64.0
PGSC0003DMG400014488 Solanum tuberosum HOM05D007649 ORTHO05D009668 3.1e-21 105.1 61 90.2
Lsat_1_v5_gn_6_8481 Lactuca sativa HOM05D007649 ORTHO05D009668 2.0e-20 102.4 86 62.8
Atru.chr7.2308 Acer truncatum HOM05D007649 ORTHO05D009668 2.6e-20 102.1 93 60.2
TAR383G0510 Trochodendron aralioides HOM05D007649 ORTHO05D009668 3.4e-20 101.7 83 63.9
Duzib150G1676 Durio zibethinus HOM05D007649 ORTHO05D009668 5.8e-20 100.9 78 65.4
ECA233G5733 Erigeron canadensis HOM05D007649 ORTHO05D009668 5.8e-20 100.9 78 64.1
Manes.16G069200 Manihot esculenta HOM05D007649 ORTHO05D009668 5.8e-20 100.9 82 67.1
EL10Ac2g02528 Beta vulgaris HOM05D007649 ORTHO05D009668 7.5e-20 100.5 77 67.5
Gohir.D07G028200 Gossypium hirsutum HOM05D007649 ORTHO05D009668 7.5e-20 100.5 78 66.7
Gorai.001G029500 Gossypium raimondii HOM05D007649 ORTHO05D009668 7.5e-20 100.5 78 66.7
Haze_21646 Corylus avellana HOM05D007649 ORTHO05D009668 1.3e-19 99.8 93 58.1
Nn2g11782 Nelumbo nucifera HOM05D007649 ORTHO05D009668 1.3e-19 99.8 101 53.5
AUR62032390 Chenopodium quinoa HOM05D007649 ORTHO05D009668 2.2e-19 99.0 78 64.1
AUR62024825 Chenopodium quinoa HOM05D007649 ORTHO05D009668 3.7e-19 98.2 78 64.1
MELO3C003657.2 Cucumis melo HOM05D007649 ORTHO05D009668 6.4e-19 97.4 80 60.0
Prupe.1G464700 Prunus persica HOM05D007649 ORTHO05D009668 6.4e-19 97.4 85 57.6
CANSAT25G0191 Cannabis sativa HOM05D007649 ORTHO05D009668 8.3e-19 97.1 78 62.8
CsaV3_3G046810 Cucumis sativus L. HOM05D007649 ORTHO05D009668 1.1e-18 96.7 80 60.0
Cpa.g.sc205.32 Carica papaya HOM05D007649 ORTHO05D009668 3.2e-18 95.1 75 64.0
ClCG05G017300 Citrullus lanatus HOM05D007649 ORTHO05D009668 3.2e-18 95.1 76 61.8
Oeu033993.1 Olea europaea HOM05D007649 ORTHO05D009668 7.0e-18 94.0 64 73.4
Oeu033995.1 Olea europaea HOM05D007649 ORTHO05D009668 7.0e-18 94.0 64 73.4
Rhsim07G0149600 Rhododendron simsii HOM05D007649 ORTHO05D009668 7.0e-18 94.0 71 63.4
Migut.N01074 Erythranthe guttata HOM05D007649 ORTHO05D009668 1.2e-17 93.2 74 62.2
FvH4_7g03290 Fragaria vesca HOM05D007649 ORTHO05D009668 1.2e-17 93.2 81 58.0
Lj1g0000027 Lotus japonicus HOM05D007649 ORTHO05D009668 1.2e-17 93.2 85 52.9
TPR.G12493 Trifolium pratense HOM05D007649 ORTHO05D009668 1.2e-17 93.2 85 55.3
arahy.Tifrunner.gnm1.ann1.0NF80D Arachis hypogaea HOM05D007649 ORTHO05D009668 1.6e-17 92.8 75 60.0
arahy.Tifrunner.gnm1.ann1.3N1A5Y Arachis hypogaea HOM05D007649 ORTHO05D009668 1.6e-17 92.8 75 60.0
Hund02998 Selenicereus undatus HOM05D007649 ORTHO05D009668 1.6e-17 92.8 75 62.7
Sc09g0008910 Simmondsia chinensis HOM05D007649 ORTHO05D009668 2.0e-17 92.4 74 62.2
PSO063G4106 Papaver somniferum HOM05D007649 ORTHO05D009668 2.7e-17 92.0 78 62.8
Aqoxy7G01751 Aquilegia oxysepala HOM05D007649 ORTHO05D009668 3.5e-17 91.7 77 61.0
Duzib168G0100 Durio zibethinus HOM05D007649 ORTHO05D009668 3.5e-17 91.7 78 61.5
Psat5g025760 Pisum sativum HOM05D007649 ORTHO05D009668 3.5e-17 91.7 75 57.3
Potri.006G245100 Populus trichocarpa HOM05D007649 ORTHO05D009668 4.6e-17 91.3 76 63.2
Eucgr.C02878 Eucalyptus grandis HOM05D007649 ORTHO05D009668 7.8e-17 90.5 64 71.9
Glyma.06G074500 Glycine max HOM05D007649 ORTHO05D009668 1.0e-16 90.1 87 51.7
RcHm_v2.0_Chr1g0325561 Rosa chinensis HOM05D007649 ORTHO05D009668 1.0e-16 90.1 77 55.8
AL6G37400 Arabidopsis lyrata HOM05D007649 ORTHO05D009668 1.3e-16 89.7 76 57.9
Ciclev10010030m.g Citrus clementina HOM05D007649 ORTHO05D009668 1.3e-16 89.7 81 58.0
CDE05G1266 Ceratophyllum demersum HOM05D007649 ORTHO05D009668 1.7e-16 89.4 87 55.2
THA.LOC104799213 Tarenaya hassleriana HOM05D007649 ORTHO05D009668 1.7e-16 89.4 78 56.4
Ah.12g060320 Amaranthus hybridus HOM05D007649 ORTHO05D009668 2.3e-16 89.0 86 57.0
Glyma.04G073400 Glycine max HOM05D007649 ORTHO05D009668 2.3e-16 89.0 87 51.7
Medtr3g108310 Medicago truncatula HOM05D007649 ORTHO05D009668 2.3e-16 89.0 75 56.0
Sp2g21960 Schrenkiella parvula HOM05D007649 ORTHO05D009668 2.3e-16 89.0 77 54.5
MBI04_g10458_MAGBIO Magnolia biondii HOM05D007649 ORTHO05D009668 5.0e-16 87.8 67 65.7
MD08G1134800 Malus domestica HOM05D007649 ORTHO05D009668 5.0e-16 87.8 74 58.1
SalBow4G3148 Salvia bowleyana HOM05D007649 ORTHO05D009668 5.0e-16 87.8 79 55.7
AT5G25570 Arabidopsis thaliana HOM05D007649 ORTHO05D009668 6.6e-16 87.4 76 56.6
A06p36270 Brassica napus HOM05D007649 ORTHO05D009668 6.6e-16 87.4 77 54.5
BraA06t26549Z Brassica rapa HOM05D007649 ORTHO05D009668 6.6e-16 87.4 77 54.5
CARHR187800 Cardamine hirsuta HOM05D007649 ORTHO05D009668 6.6e-16 87.4 76 55.3
Thhalv10005188m.g Eutrema salsugineum HOM05D007649 ORTHO05D009668 8.6e-16 87.0 77 53.2
Potri.012G125000 Populus trichocarpa HOM05D007649 ORTHO05D009668 8.6e-16 87.0 76 61.8
Sed0022915 Sechium edule HOM05D007649 ORTHO05D009668 8.6e-16 87.0 72 58.3
Carub.0006s2344 Capsella rubella HOM05D007649 ORTHO05D009668 1.1e-15 86.7 76 56.6
TWI63G0355 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 1.5e-15 86.3 78 51.3
Sed0003009 Sechium edule HOM05D007649 ORTHO05D009668 3.3e-15 85.1 74 58.1
Phvul.009G099200 Phaseolus vulgaris HOM05D007649 ORTHO05D009668 1.6e-14 82.8 87 47.1
Aa31LG11G4690 Aethionema arabicum HOM05D007649 ORTHO05D009668 2.1e-14 82.4 77 53.2
C02p59430 Brassica napus HOM05D007649 ORTHO05D009668 8.1e-14 80.5 77 49.4
FAN10G0583 Fragaria x ananassa HOM05D007649 ORTHO05D009668 8.1e-14 80.5 67 58.2
CSS0042406 Camellia sinensis var. sinensis HOM05D007649 ORTHO05D009668 1.4e-13 79.7 63 61.9
Sabra06G0191900 Salix brachista HOM05D007649 ORTHO05D009668 1.8e-13 79.3 68 60.3
BolC7t44754H Brassica oleracea HOM05D007649 ORTHO05D009668 5.2e-13 77.8 81 50.6
ATR0037G059 Amborella trichopoda HOM05D007649 ORTHO05D009668 1.2e-12 76.6 79 51.9
vmacro05350 Vaccinium macrocarpon HOM05D007649 ORTHO05D009668 4.9e-11 71.2 54 59.3
BolC2t12006H Brassica oleracea HOM05D007649 ORTHO05D009668 1.4e-10 69.7 66 48.5
FAN06G3614 Fragaria x ananassa HOM05D007649 ORTHO05D009668 3.2e-10 68.6 56 57.1
TWI34G1739 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 3.5e-09 65.1 56 55.4
Gohir.A07G024600 Gossypium hirsutum HOM05D007649 ORTHO05D009668 4.6e-09 64.7 65 55.4
Os05g0180700 Oryza sativa ssp. japonica HOM05D007649 ORTHO05D009668 7.8e-09 63.9 98 34.7
Actinidia14648 Actinidia chinensis HOM05D007649 ORTHO05D009668 3.9e-08 61.6 67 53.7
FAN03G3370 Fragaria x ananassa HOM05D007649 ORTHO05D009668 6.6e-08 60.8 90 40.0
AagrBONN_evm.TU.Sc2ySwM_228.4082 Anthoceros agrestis HOM05D007649 ORTHO05D009668 4.3e-07 58.2 93 37.6
Prupe.3G140100 Prunus persica HOM05D007649 ORTHO05D009668 1.6e-06 56.2 53 49.1


User provided reference genes

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