Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012587g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.5e-95 352.8 180 100.0
Nitab4.5_0011728g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.3e-91 339.0 178 96.6
Nitab4.5_0009247g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.8e-72 276.2 278 59.4
Nitab4.5_0004440g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.9e-69 266.2 278 56.5
PGSC0003DMG400020787 Solanum tuberosum HOM05D002238 ORTHO05D007272 4.8e-65 251.5 278 50.7
Peaxi162Scf00327g00039 Petunia axillaris HOM05D002238 ORTHO05D007272 7.7e-63 244.2 278 51.1
Sopen08g016790 Solanum pennellii HOM05D002238 ORTHO05D007272 1.0e-62 243.8 278 50.0
Solyc08g061450.3 Solanum lycopersicum HOM05D002238 ORTHO05D007272 2.5e-61 239.2 278 49.6
Nitab4.5_0009119g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.2e-61 238.8 245 58.8
Peaxi162Scf00002g00372 Petunia axillaris HOM05D002238 ORTHO05D003453 6.7e-59 231.1 279 49.5
Peaxi162Scf00108g00063 Petunia axillaris HOM05D002238 ORTHO05D007272 1.7e-57 226.5 279 49.8
Nitab4.5_0017994g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.9e-51 205.3 231 55.4
CSS0032500 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D007272 1.1e-45 187.2 270 40.7
Peaxi162Scf00108g00056 Petunia axillaris HOM05D002238 ORTHO05D007272 4.2e-45 185.3 242 49.6
Cc08_g00970 Coffea canephora HOM05D002238 ORTHO05D007272 5.5e-45 184.9 276 41.3
Peaxi162Scf00365g00022 Petunia axillaris HOM05D002238 ORTHO05D007272 8.0e-44 181.0 146 65.8
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 5.7e-42 174.9 280 40.0
Haze_00046 Corylus avellana HOM05D002238 ORTHO05D007272 5.7e-42 174.9 280 40.0
Oeu034743.2 Olea europaea HOM05D002238 ORTHO05D007272 7.5e-42 174.5 278 38.8
Lj8C25T21 Lonicera japonica HOM05D002238 ORTHO05D007272 3.7e-41 172.2 248 42.3
Manes.16G120100 Manihot esculenta HOM05D002238 ORTHO05D007272 6.3e-41 171.4 277 39.0
Dinv30168 Davidia involucrata HOM05D002238 ORTHO05D007272 1.8e-40 169.9 268 40.7
QL09p012798 Quercus lobata HOM05D002238 ORTHO05D007272 7.0e-40 167.9 281 37.7
Ciclev10010344m.g Citrus clementina HOM05D002238 ORTHO05D007272 1.2e-39 167.2 279 38.4
Sabra06G0196500 Salix brachista HOM05D002238 ORTHO05D007272 1.0e-38 164.1 252 40.5
Gohir.A09G019700 Gossypium hirsutum HOM05D002238 ORTHO05D007272 2.2e-38 162.9 268 38.1
Rhsim02G0198300 Rhododendron simsii HOM05D002238 ORTHO05D007272 2.9e-38 162.5 270 37.0
Actinidia13250 Actinidia chinensis HOM05D002238 ORTHO05D007272 3.8e-38 162.2 270 37.0
CiPaw.05G262300 Carya illinoinensis HOM05D002238 ORTHO05D007272 3.8e-38 162.2 279 37.3
Gohir.1Z049673 Gossypium hirsutum HOM05D002238 ORTHO05D007272 5.0e-38 161.8 268 38.1
Gohir.D09G019000 Gossypium hirsutum HOM05D002238 ORTHO05D007272 5.0e-38 161.8 268 38.1
CANSAT54G2252 Cannabis sativa HOM05D002238 ORTHO05D007272 6.5e-38 161.4 278 36.3
COL.COLO4_00195 Corchorus olitorius HOM05D002238 ORTHO05D007272 1.1e-37 160.6 269 38.7
Rhsim02G0195500 Rhododendron simsii HOM05D002238 ORTHO05D007272 1.1e-37 160.6 269 37.2
ClCG05G017070 Citrullus lanatus HOM05D002238 ORTHO05D007272 1.9e-37 159.8 276 37.7
Cpa.g.sc533.2 Carica papaya HOM05D002238 ORTHO05D007272 3.2e-37 159.1 278 37.1
Migut.A00055 Erythranthe guttata HOM05D002238 ORTHO05D007272 5.5e-37 158.3 276 35.9
THA.LOC104810431 Tarenaya hassleriana HOM05D002238 ORTHO05D007272 5.5e-37 158.3 272 37.5
Potri.006G251400 Populus trichocarpa HOM05D002238 ORTHO05D007272 9.4e-37 157.5 279 37.3
Prupe.1G474900 Prunus persica HOM05D002238 ORTHO05D007272 1.2e-36 157.1 280 35.0
DCAR_006233 Daucus carota HOM05D002238 ORTHO05D007272 4.7e-36 155.2 276 37.3
MD08G1146200 Malus domestica HOM05D002238 ORTHO05D007272 1.0e-35 154.1 280 35.0
Aa31LG11G4600 Aethionema arabicum HOM05D002238 ORTHO05D007272 1.4e-35 153.7 271 37.6
Eucgr.C01786 Eucalyptus grandis HOM05D002238 ORTHO05D007272 1.4e-35 153.7 277 36.5
Gorai.006G022700 Gossypium raimondii HOM05D002238 ORTHO05D007272 1.4e-35 153.7 268 37.7
Nitab4.5_0011728g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.4e-35 153.7 107 76.6
Sed0000756 Sechium edule HOM05D002238 ORTHO05D007272 3.0e-35 152.5 274 37.6
MBI04_g24206_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D007272 5.2e-35 151.8 276 35.1
Sc11g0007780 Simmondsia chinensis HOM05D002238 ORTHO05D007272 5.2e-35 151.8 279 36.6
Nitab4.5_0012587g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 6.8e-35 151.4 107 75.7
Nn2g11964 Nelumbo nucifera HOM05D002238 ORTHO05D007272 8.8e-35 151.0 280 35.0
Aqoxy3G03159 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 3.4e-34 149.1 275 35.3
AUR62012126 Chenopodium quinoa HOM05D002238 ORTHO05D007272 3.4e-34 149.1 278 36.7
TAR625G0243 Trochodendron aralioides HOM05D002238 ORTHO05D007272 3.4e-34 149.1 279 35.1
C07p42320 Brassica napus HOM05D002238 ORTHO05D007272 5.7e-34 148.3 271 35.8
Duzib168G0728 Durio zibethinus HOM05D002238 ORTHO05D007272 7.5e-34 147.9 140 57.1
Thecc.09G149800 Theobroma cacao HOM05D002238 ORTHO05D007272 7.5e-34 147.9 137 55.5
Atru.chr7.2264 Acer truncatum HOM05D002238 ORTHO05D007272 9.8e-34 147.5 150 52.7
BolC7t44761H Brassica oleracea HOM05D002238 ORTHO05D007272 9.8e-34 147.5 271 35.8
TWI32G0967 Tripterygium wilfordii HOM05D002238 ORTHO05D007272 9.8e-34 147.5 279 35.1
RcHm_v2.0_Chr6g0298391 Rosa chinensis HOM05D002238 ORTHO05D007272 6.3e-33 144.8 278 34.2
VMungo1215G1712 Vigna mungo HOM05D002238 ORTHO05D007272 8.3e-33 144.4 279 34.4
Phvul.003G021200 Phaseolus vulgaris HOM05D002238 ORTHO05D007272 1.1e-32 144.1 279 34.1
AL6G37300 Arabidopsis lyrata HOM05D002238 ORTHO05D007272 1.8e-32 143.3 274 35.4
Thhalv10005310m.g Eutrema salsugineum HOM05D002238 ORTHO05D007272 2.4e-32 142.9 275 34.9
Glyma.05G173000 Glycine max HOM05D002238 ORTHO05D007272 2.4e-32 142.9 278 34.9
AUR62040710 Chenopodium quinoa HOM05D002238 ORTHO05D007272 4.1e-32 142.1 278 35.6
AT5G25500 Arabidopsis thaliana HOM05D002238 ORTHO05D007272 5.4e-32 141.7 274 34.7
C02p59480 Brassica napus HOM05D002238 ORTHO05D007272 5.4e-32 141.7 265 34.7
Ah.16g102520 Amaranthus hybridus HOM05D002238 ORTHO05D007272 7.0e-32 141.4 279 35.1
QL10p065634 Quercus lobata HOM05D002238 ORTHO05D007272 7.0e-32 141.4 152 49.3
Rhsim09G0014000 Rhododendron simsii HOM05D002238 ORTHO05D007272 7.0e-32 141.4 140 52.9
Sp2g22030 Schrenkiella parvula HOM05D002238 ORTHO05D007272 9.1e-32 141.0 275 34.5
arahy.Tifrunner.gnm1.ann1.U1RD55 Arachis hypogaea HOM05D002238 ORTHO05D007272 1.2e-31 140.6 277 35.4
SGA_v2.0_scaffold20G09144 Striga asiatica HOM05D002238 ORTHO05D007272 1.2e-31 140.6 278 33.5
arahy.Tifrunner.gnm1.ann1.BAI8MS Arachis hypogaea HOM05D002238 ORTHO05D007272 1.6e-31 140.2 277 35.4
arahy.Tifrunner.gnm1.ann1.TBR9XZ Arachis hypogaea HOM05D002238 ORTHO05D007272 1.6e-31 140.2 277 35.4
CARHR187880 Cardamine hirsuta HOM05D002238 ORTHO05D007272 1.6e-31 140.2 278 34.9
MELO3C003684.2 Cucumis melo HOM05D002238 ORTHO05D007272 2.7e-31 139.4 277 34.3
arahy.Tifrunner.gnm1.ann1.V2KEMD Arachis hypogaea HOM05D002238 ORTHO05D007272 4.5e-31 138.7 277 35.0
CsaV3_3G046550 Cucumis sativus L. HOM05D002238 ORTHO05D007272 5.9e-31 138.3 276 34.1
Lalb_Chr25g0279781 Lupinus albus HOM05D002238 ORTHO05D007272 7.7e-31 137.9 272 34.9
unitig_32.g11479 Utricularia gibba HOM05D002238 ORTHO05D007272 7.7e-31 137.9 278 31.3
arahy.Tifrunner.gnm1.ann1.Z0G856 Arachis hypogaea HOM05D002238 ORTHO05D007272 1.0e-30 137.5 277 34.7
FvH4_2g29530 Fragaria vesca HOM05D002238 ORTHO05D007272 1.0e-30 137.5 278 32.7
FAN24G3345 Fragaria x ananassa HOM05D002238 ORTHO05D007272 1.0e-30 137.5 278 32.7
arahy.Tifrunner.gnm1.ann1.NZP3ZD Arachis hypogaea HOM05D002238 ORTHO05D007272 1.7e-30 136.7 277 34.7
BolC2t12011H Brassica oleracea HOM05D002238 ORTHO05D007272 1.7e-30 136.7 265 33.6
Carub.0006s2336 Capsella rubella HOM05D002238 ORTHO05D007272 2.3e-30 136.3 274 33.2
A02p39700 Brassica napus HOM05D002238 ORTHO05D007272 5.0e-30 135.2 265 33.2
Psat6g044800 Pisum sativum HOM05D002238 ORTHO05D001984 6.5e-30 134.8 278 32.7
Aqoxy5G03332 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 1.9e-29 133.3 147 47.6
PGR042G2797 Punica granatum HOM05D002238 ORTHO05D007272 2.5e-29 132.9 279 31.2
arahy.Tifrunner.gnm1.ann1.H3G4DQ Arachis hypogaea HOM05D002238 ORTHO05D007272 3.2e-29 132.5 277 34.3
BraA02t08935Z Brassica rapa HOM05D002238 ORTHO05D007272 3.2e-29 132.5 265 32.8
FAN20G0928 Fragaria x ananassa HOM05D002238 ORTHO05D007272 3.2e-29 132.5 278 32.4
PSO017G3814 Papaver somniferum HOM05D002238 ORTHO05D007272 4.2e-29 132.1 282 31.6
FAN27G0629 Fragaria x ananassa HOM05D002238 ORTHO05D007272 9.5e-29 131.0 278 32.0
Medtr1g031820 Medicago truncatula HOM05D002238 ORTHO05D001984 9.5e-29 131.0 278 32.0
PSO349G0250 Papaver somniferum HOM05D002238 ORTHO05D007272 1.2e-28 130.6 282 31.2
Ca_12577_v3 Cicer arietinum L. HOM05D002238 ORTHO05D007272 1.6e-28 130.2 278 32.4
TPR.G36878 Trifolium pratense HOM05D002238 ORTHO05D001984 2.1e-28 129.8 278 32.7
EL10Ac2g04715 Beta vulgaris HOM05D002238 ORTHO05D007272 6.1e-28 128.3 266 35.0
MD15G1122300 Malus domestica HOM05D002238 ORTHO05D007272 1.4e-27 127.1 138 47.1
Lj5g0011751 Lotus japonicus HOM05D002238 ORTHO05D007272 5.2e-27 125.2 278 31.7
Lsat_1_v5_gn_5_105001 Lactuca sativa HOM05D002238 ORTHO05D007272 2.6e-26 122.9 266 33.8
HPP92_000893 Vanilla planifolia HOM05D002238 ORTHO05D007272 5.7e-26 121.7 274 30.7
Nitab4.5_0002007g0100 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.8e-24 116.7 87 73.6
HanXRQChr13g0402681 Helianthus annuus HOM05D002238 ORTHO05D007272 2.3e-22 109.8 266 32.0
QL01p053808 Quercus lobata HOM05D002238 ORTHO05D007272 6.6e-22 108.2 200 35.5
GSVIVG01035523001 Vitis vinifera HOM05D002238 ORTHO05D007272 7.3e-21 104.8 207 35.7
SHI18572 Sapria himalayana HOM05D002238 ORTHO05D007272 2.1e-20 103.2 274 28.5
BraA06t26543Z Brassica rapa HOM05D002238 ORTHO05D007272 6.8e-19 98.2 213 31.0
Nitab4.5_0011591g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.5e-18 97.1 74 73.0
QL10p065406 Quercus lobata HOM05D002238 ORTHO05D007272 7.5e-18 94.7 110 45.5
Peaxi162Scf00108g00048 Petunia axillaris HOM05D002238 ORTHO05D007272 4.1e-16 89.0 170 40.0
Nitab4.5_0013543g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.2e-15 87.4 43 95.3
SalBow7G3196 Salvia bowleyana HOM05D002238 ORTHO05D007272 1.0e-14 84.3 178 31.5
Nitab4.5_0004440g0040 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.7e-14 83.6 43 88.4
A06p36210 Brassica napus HOM05D002238 ORTHO05D007272 1.9e-13 80.1 98 43.9
SalBow6G2105 Salvia bowleyana HOM05D002238 ORTHO05D007272 4.3e-13 79.0 181 30.9
ATR1156G046 Amborella trichopoda HOM05D002238 ORTHO05D007272 9.5e-13 77.8 208 29.3
MD15G1119600 Malus domestica HOM05D002238 ORTHO05D007272 2.1e-12 76.6 195 30.3
Zm00001eb090760 Zea mays HOM05D002238 ORTHO05D007272 1.2e-10 70.9 202 28.7
Atru.chr7.2385 Acer truncatum HOM05D002238 ORTHO05D026268 1.5e-10 70.5 68 50.0
SEGI_41370 Sequoiadendron giganteum HOM05D002238 ORTHO05D007272 2.6e-10 69.7 142 32.4
Glyma.09G122801 Glycine max HOM05D002238 ORTHO05D007272 4.4e-10 68.9 42 73.8
Os11g0207300 Oryza sativa ssp. japonica HOM05D002238 ORTHO05D007272 1.3e-09 67.4 210 26.7
ECA233G3411 Erigeron canadensis HOM05D002238 ORTHO05D007272 8.3e-09 64.7 42 69.0
Atru.chr7.2387 Acer truncatum HOM05D002238 ORTHO05D007272 2.4e-08 63.2 41 70.7
Duzib187G0736 Durio zibethinus HOM05D002238 ORTHO05D007272 9.2e-08 61.2 42 64.3
BcaNung07110 Brassica carinata HOM05D002238 ORTHO05D007272 1.0e-06 57.8 42 59.5


User provided reference genes

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