Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 2.5e-78 295.4 158 100.0
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 5.7e-70 267.7 155 85.2
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 1.6e-59 233.0 150 78.7
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 2.0e-59 232.6 150 78.0
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 1.0e-55 220.3 155 79.4
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.3e-53 213.4 156 69.9
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 1.2e-19 100.5 149 42.3
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 3.5e-19 99.0 119 46.2
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 7.8e-19 97.8 62 67.7
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 7.8e-19 97.8 121 47.1
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.7e-18 96.7 128 40.6
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.7e-18 96.7 128 40.6
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 3.0e-18 95.9 147 42.2
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 5.0e-18 95.1 131 42.7
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.1e-17 94.0 144 41.0
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 1.5e-17 93.6 144 37.5
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 3.3e-17 92.4 142 46.5
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 7.3e-17 91.3 173 38.2
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 7.3e-17 91.3 59 67.8
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 9.5e-17 90.9 54 68.5
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 1.2e-16 90.5 63 65.1
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.6e-16 90.1 51 74.5
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 2.1e-16 89.7 124 38.7
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 3.6e-16 89.0 125 40.0
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 8.1e-16 87.8 59 62.7
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.1e-15 87.4 57 68.4
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.1e-15 87.4 126 37.3
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.8e-15 86.7 52 67.3
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 2.3e-15 86.3 50 74.0
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 2.3e-15 86.3 49 69.4
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 4.0e-15 85.5 52 65.4
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 5.2e-15 85.1 53 64.2
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 8.9e-15 84.3 113 39.8
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 8.9e-15 84.3 113 39.8
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 8.9e-15 84.3 56 64.3
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 8.9e-15 84.3 48 68.8
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 8.9e-15 84.3 46 76.1
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 1.2e-14 84.0 51 68.6
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 2.0e-14 83.2 55 61.8
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 2.6e-14 82.8 38 84.2
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 2.6e-14 82.8 38 84.2
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 2.6e-14 82.8 133 41.4
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 4.4e-14 82.0 85 44.7
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 4.4e-14 82.0 45 75.6
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 5.8e-14 81.6 52 61.5
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 7.5e-14 81.3 47 72.3
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 9.8e-14 80.9 109 42.2
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.7e-13 80.1 146 36.3
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.7e-13 80.1 44 70.5
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 2.9e-13 79.3 48 62.5
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 2.9e-13 79.3 83 45.8
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.9e-13 79.3 53 58.5
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 3.7e-13 79.0 54 61.1
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 3.7e-13 79.0 121 43.0
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 6.4e-13 78.2 41 78.0
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 6.4e-13 78.2 151 38.4
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 6.4e-13 78.2 151 38.4
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 6.4e-13 78.2 115 36.5
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.4e-12 77.0 47 63.8
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.4e-12 77.0 47 63.8
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.9e-12 76.6 47 63.8
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 2.4e-12 76.3 34 85.3
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 4.1e-12 75.5 36 77.8
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 4.1e-12 75.5 62 59.7
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 5.4e-12 75.1 38 73.7
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 7.1e-12 74.7 41 70.7
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 9.2e-12 74.3 127 36.2
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 9.2e-12 74.3 35 82.9
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 9.2e-12 74.3 50 60.0
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.6e-11 73.6 40 77.5
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.6e-11 73.6 34 82.4
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 2.1e-11 73.2 57 56.1
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.1e-11 73.2 50 62.0
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 3.5e-11 72.4 59 52.5
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 3.5e-11 72.4 33 84.8
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 3.5e-11 72.4 34 79.4
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 4.6e-11 72.0 139 35.3
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 4.6e-11 72.0 35 80.0
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 4.6e-11 72.0 55 58.2
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 6.0e-11 71.6 33 84.8
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 7.8e-11 71.2 93 40.9
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 1.0e-10 70.9 105 41.9
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.3e-10 70.5 55 58.2
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 1.3e-10 70.5 35 77.1
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.7e-10 70.1 32 81.2
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.3e-10 69.7 39 74.4
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 3.9e-10 68.9 35 77.1
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 5.1e-10 68.6 31 80.6
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 8.6e-10 67.8 36 75.0
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.1e-09 67.4 47 55.3
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 1.5e-09 67.0 30 80.0
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 1.9e-09 66.6 29 86.2
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 3.3e-09 65.9 34 70.6
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 5.6e-09 65.1 31 80.6
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 5.6e-09 65.1 31 80.6
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 7.3e-09 64.7 39 69.2
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 9.5e-09 64.3 37 67.6
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 9.5e-09 64.3 29 82.8
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 9.5e-09 64.3 45 53.3
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 9.5e-09 64.3 31 77.4
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 1.6e-08 63.5 30 80.0
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 3.6e-08 62.4 35 71.4
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 2.3e-07 59.7 29 72.4
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 3.1e-07 59.3 33 66.7


User provided reference genes

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