Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012486g0010 Nicotiana tabacum HOM05D011204 ORTHO05D011566 4.2e-203 711.1 341 100.0
Nitab4.5_0000780g0120 Nicotiana tabacum HOM05D011204 ORTHO05D011566 1.1e-65 254.6 240 52.5
CAN.G1787.1 Capsicum annuum HOM05D011204 ORTHO05D011566 3.3e-59 233.0 268 47.8
Nitab4.5_0004673g0020 Nicotiana tabacum HOM05D011204 ORTHO05D011566 1.5e-54 217.6 185 56.2
CAN.G69.1 Capsicum annuum HOM05D011204 ORTHO05D011566 3.6e-45 186.4 287 36.6
Nitab4.5_0008539g0030 Nicotiana tabacum HOM05D011204 ORTHO05D011566 1.1e-20 105.1 162 34.0
Nitab4.5_0003796g0020 Nicotiana tabacum HOM05D011204 ORTHO05D011566 5.2e-20 102.8 311 26.0
Nitab4.5_0008137g0070 Nicotiana tabacum HOM05D011204 ORTHO05D011566 8.3e-18 95.5 277 24.9
CAN.G731.1 Capsicum annuum HOM05D011204 ORTHO05D011566 1.1e-14 85.1 146 33.6
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 2.3e-12 77.4 144 31.9
Nitab4.5_0002366g0030 Nicotiana tabacum HOM05D011204 ORTHO05D011566 6.8e-12 75.9 69 52.2
CAN.G1344.13 Capsicum annuum HOM05D011204 ORTHO05D011566 7.6e-11 72.4 56 53.6
Nitab4.5_0006600g0010 Nicotiana tabacum HOM05D012010 ORTHO05D015171 7.6e-11 72.4 142 28.9
Oeu019659.1 Olea europaea HOM05D007234 ORTHO05D008488 3.8e-10 70.1 139 34.5
arahy.Tifrunner.gnm1.ann1.I277IB Arachis hypogaea HOM05D005718 ORTHO05D004853 4.9e-10 69.7 144 29.9
MSTRG.11524 Avicennia marina HOM05D000247 ORTHO05D003114 4.1e-09 66.6 154 27.9
ClCG02G021720 Citrullus lanatus HOM05D007234 ORTHO05D008488 4.1e-09 66.6 146 29.5
Oeu058994.1 Olea europaea HOM05D007234 ORTHO05D008488 7.1e-09 65.9 140 32.9
PGSC0003DMG400040614 Solanum tuberosum HOM05D000303 ORTHO05D000570 7.1e-09 65.9 168 29.8
arahy.Tifrunner.gnm1.ann1.P0BLZN Arachis hypogaea HOM05D005718 ORTHO05D004853 9.2e-09 65.5 222 23.4
MELO3C021476.2 Cucumis melo HOM05D007234 ORTHO05D008488 1.6e-08 64.7 149 28.9
CsaV3_6G014490 Cucumis sativus L. HOM05D007234 ORTHO05D008488 1.6e-08 64.7 149 28.2
Ca_22864_v3 Cicer arietinum L. HOM05D026577 ORTHO05D008488 3.5e-08 63.5 156 27.6
arahy.Tifrunner.gnm1.ann1.VX3S13 Arachis hypogaea HOM05D005718 ORTHO05D004853 4.6e-08 63.2 149 24.8
VMungo0647G0850 Vigna mungo HOM05D000410 ORTHO05D007231 4.6e-08 63.2 153 26.8
CAN.G303.18 Capsicum annuum HOM05D011204 ORTHO05D011566 6.0e-08 62.8 136 31.6
Phvul.001G023000 Phaseolus vulgaris HOM05D009155 ORTHO05D004853 6.0e-08 62.8 154 27.9
Psat4g127920 Pisum sativum HOM05D026577 ORTHO05D008488 7.8e-08 62.4 155 29.0
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 7.8e-08 62.4 163 27.0
Oeu012540.1 Olea europaea HOM05D007234 ORTHO05D008488 1.7e-07 61.2 141 32.6
PGSC0003DMG400045286 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.0e-07 60.5 168 26.2
Oeu046571.1 Olea europaea HOM05D007234 ORTHO05D008488 3.9e-07 60.1 115 33.9
Oeu063638.1 Olea europaea HOM05D007234 ORTHO05D008488 5.1e-07 59.7 115 32.2
Oeu048494.1 Olea europaea HOM05D007234 ORTHO05D008488 1.1e-06 58.5 115 32.2
Oeu036146.1 Olea europaea HOM05D007234 ORTHO05D008488 1.5e-06 58.2 140 29.3
SHI06343 Sapria himalayana HOM05D000014 ORTHO05D000093 1.5e-06 58.2 112 28.6
PGSC0003DMG400038274 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.9e-06 57.8 127 28.3
PGSC0003DMG400038301 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.9e-06 57.8 142 28.9
TPR.G30973 Trifolium pratense HOM05D005718 ORTHO05D004853 1.9e-06 57.8 154 29.2
Ca_12947_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.3e-06 57.0 115 29.6
Medtr4g027155 Medicago truncatula HOM05D045294 ORTHO05D004853 3.3e-06 57.0 116 28.4
Oeu049634.1 Olea europaea HOM05D007234 ORTHO05D008488 3.3e-06 57.0 115 31.3
Gohir.D09G037250 Gossypium hirsutum HOM05D013638 ORTHO05D016332 4.3e-06 56.6 129 27.1
Medtr6g023550 Medicago truncatula HOM05D005718 ORTHO05D004853 4.3e-06 56.6 126 32.5
Oeu040314.1 Olea europaea HOM05D007234 ORTHO05D008488 5.6e-06 56.2 115 31.3
PGSC0003DMG400032784 Solanum tuberosum HOM05D000303 ORTHO05D000570 7.3e-06 55.8 168 23.2
Oeu050318.1 Olea europaea HOM05D007234 ORTHO05D008488 9.6e-06 55.5 119 31.1
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 9.6e-06 55.5 149 26.2


User provided reference genes

Program Settings