Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012466g0010 Nicotiana tabacum HOM05D000350 ORTHO05D036919 2.2e-143 512.3 260 100.0
Nitab4.5_0001714g0130 Nicotiana tabacum HOM05D000350 ORTHO05D036919 5.2e-113 411.4 265 82.6
PGSC0003DMG400022738 Solanum tuberosum HOM05D000350 ORTHO05D000228 1.9e-75 286.6 383 50.1
Solyc08g080150.1 Solanum lycopersicum HOM05D000350 ORTHO05D000228 3.8e-71 272.3 379 48.0
Sopen08g028510 Solanum pennellii HOM05D000350 ORTHO05D000228 5.7e-67 258.5 386 46.6
Peaxi162Scf00620g00828 Petunia axillaris HOM05D000350 ORTHO05D036919 5.0e-63 245.4 289 57.4
CAN.G981.52 Capsicum annuum HOM05D000350 ORTHO05D000228 8.5e-55 218.0 359 44.8
Dinv37700 Davidia involucrata HOM05D002871 ORTHO05D003307 8.3e-34 148.3 224 48.2
Hma1.2p1_0138F.1_g062680 Hydrangea macrophylla HOM05D000350 ORTHO05D000228 1.6e-32 144.1 220 46.8
TWI81G0950 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 2.5e-30 136.7 216 44.4
QL12p016776 Quercus lobata HOM05D000350 ORTHO05D000228 1.2e-29 134.4 218 43.1
Thecc.03G269600 Theobroma cacao HOM05D000350 ORTHO05D000228 8.0e-29 131.7 205 45.4
Haze_08967 Corylus avellana HOM05D000350 ORTHO05D000228 6.8e-28 128.6 203 45.8
TWI60G1056 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 4.4e-27 125.9 222 41.9
FAN08G2677 Fragaria x ananassa HOM05D000350 ORTHO05D000228 1.3e-26 124.4 218 40.4
Duzib068G1089 Durio zibethinus HOM05D000350 ORTHO05D000228 1.1e-25 121.3 193 43.5
Duzib205G0799 Durio zibethinus HOM05D000350 ORTHO05D000228 1.1e-25 121.3 201 45.3
RcHm_v2.0_Chr7g0199561 Rosa chinensis HOM05D000350 ORTHO05D000228 9.2e-25 118.2 215 39.5
FvH4_5g01340 Fragaria vesca HOM05D000350 ORTHO05D000228 1.2e-24 117.9 218 39.0
FAN18G2561 Fragaria x ananassa HOM05D000350 ORTHO05D000228 1.2e-24 117.9 218 39.0
Cfa012088 Carpinus fangiana HOM05D000350 ORTHO05D000228 4.5e-24 115.9 201 42.3
Gorai.004G206900 Gossypium raimondii HOM05D000350 ORTHO05D000228 4.5e-24 115.9 192 42.2
Potri.001G111800 Populus trichocarpa HOM05D000350 ORTHO05D000228 4.5e-24 115.9 210 41.9
FAN13G2017 Fragaria x ananassa HOM05D000350 ORTHO05D000228 7.8e-24 115.2 219 38.8
Sabra01G0085400 Salix brachista HOM05D000350 ORTHO05D000228 1.0e-23 114.8 209 42.6
Prupe.5G088800 Prunus persica HOM05D000350 ORTHO05D000228 1.1e-22 111.3 192 40.1
COL.COLO4_23782 Corchorus olitorius HOM05D000350 ORTHO05D000228 2.5e-22 110.2 166 44.0
GSVIVG01019876001 Vitis vinifera HOM05D000350 ORTHO05D000228 2.5e-22 110.2 195 42.1
TAR374G0105 Trochodendron aralioides HOM05D000350 ORTHO05D000228 5.6e-22 109.0 211 39.8
Gohir.A08G177800 Gossypium hirsutum HOM05D000350 ORTHO05D000228 1.2e-21 107.8 189 41.3
TAR375G0112 Trochodendron aralioides HOM05D000350 ORTHO05D000228 2.1e-21 107.1 211 39.8
Gorai.008G243000 Gossypium raimondii HOM05D000350 ORTHO05D000228 6.1e-21 105.5 216 39.8
Phvul.003G213300 Phaseolus vulgaris HOM05D000350 ORTHO05D000228 8.0e-21 105.1 199 38.2
Nn1g01308 Nelumbo nucifera HOM05D000350 ORTHO05D000228 1.4e-20 104.4 175 41.1
Gohir.D12G226900 Gossypium hirsutum HOM05D000350 ORTHO05D000228 3.4e-19 99.8 216 38.9
VMungo1215G2023 Vigna mungo HOM05D000350 ORTHO05D000228 4.4e-19 99.4 199 36.2
Lj4g0013837 Lotus japonicus HOM05D000350 ORTHO05D000228 5.8e-19 99.0 214 37.4
Glyma.05G050400 Glycine max HOM05D000350 ORTHO05D000228 9.8e-19 98.2 171 42.1
PGR042G1691 Punica granatum HOM05D000350 ORTHO05D000228 9.8e-19 98.2 217 35.9
MD04G1069300 Malus domestica HOM05D000350 ORTHO05D000228 1.3e-18 97.8 204 35.3
CiPaw.11G142100 Carya illinoinensis HOM05D000350 ORTHO05D000228 2.2e-18 97.1 231 35.9
Glyma.17G132400 Glycine max HOM05D000350 ORTHO05D000228 2.2e-18 97.1 196 38.8
Hma1.2p1_0488F.1_g163700 Hydrangea macrophylla HOM05D000350 ORTHO05D000228 1.4e-17 94.4 208 40.4
Nn6g34298 Nelumbo nucifera HOM05D000350 ORTHO05D000228 2.4e-17 93.6 211 37.4
Sabra14G0053700 Salix brachista HOM05D000350 ORTHO05D000228 1.0e-15 88.2 199 36.7
Cpa.g.sc18.176 Carica papaya HOM05D000350 ORTHO05D000228 1.3e-15 87.8 196 36.7
COL.COLO4_14233 Corchorus olitorius HOM05D000350 ORTHO05D000228 3.9e-15 86.3 202 39.6
Gorai.006G197000 Gossypium raimondii HOM05D000350 ORTHO05D000228 3.9e-15 86.3 204 36.3
Ciclev10020713m.g Citrus clementina HOM05D000350 ORTHO05D000228 1.5e-14 84.3 173 34.7
Gohir.A09G179600 Gossypium hirsutum HOM05D000350 ORTHO05D000228 1.9e-14 84.0 203 35.5
Lj8C31T12 Lonicera japonica HOM05D000350 ORTHO05D000228 1.9e-14 84.0 233 32.6
FAN04G1566 Fragaria x ananassa HOM05D000350 ORTHO05D000228 3.3e-14 83.2 195 34.4
Gohir.D09G174900 Gossypium hirsutum HOM05D000350 ORTHO05D000228 4.3e-14 82.8 204 35.3
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 7.3e-14 82.0 191 33.5
Lsat_1_v5_gn_9_53821 Lactuca sativa HOM05D000350 ORTHO05D000228 9.5e-14 81.6 202 35.1
PSO782G2783 Papaver somniferum HOM05D000350 ORTHO05D000228 9.5e-14 81.6 215 35.8
Potri.014G078500 Populus trichocarpa HOM05D000350 ORTHO05D000228 1.2e-13 81.3 192 35.4
GSVIVG01027588001 Vitis vinifera HOM05D000350 ORTHO05D000228 1.2e-13 81.3 181 35.4
Rhsim07G0022500 Rhododendron simsii HOM05D000350 ORTHO05D000228 1.6e-13 80.9 207 35.7
Dinv43745 Davidia involucrata HOM05D000350 ORTHO05D000228 2.1e-13 80.5 212 35.4
Duzib068G1051 Durio zibethinus HOM05D000350 ORTHO05D000228 2.8e-13 80.1 210 34.3
Peaxi162Scf00192g00043 Petunia axillaris HOM05D000350 ORTHO05D000228 2.8e-13 80.1 208 35.1
Aqoxy7G00484 Aquilegia oxysepala HOM05D000350 ORTHO05D000228 3.6e-13 79.7 247 32.0
Rhsim09G0195300 Rhododendron simsii HOM05D000350 ORTHO05D000228 4.7e-13 79.3 191 36.1
MSTRG.27146 Avicennia marina HOM05D000350 ORTHO05D000228 8.0e-13 78.6 211 35.5
Potri.002G152200 Populus trichocarpa HOM05D000350 ORTHO05D000228 1.1e-12 78.2 198 33.8
vmacro13349 Vaccinium macrocarpon HOM05D000350 ORTHO05D000228 1.1e-12 78.2 201 35.3
Duzib084G0927 Durio zibethinus HOM05D000350 ORTHO05D000228 1.4e-12 77.8 201 34.8
THA.LOC104817268 Tarenaya hassleriana HOM05D000350 ORTHO05D000228 1.4e-12 77.8 206 35.0
PSO782G1290 Papaver somniferum HOM05D000350 ORTHO05D000228 4.0e-12 76.3 208 35.1
PGSC0003DMG400024254 Solanum tuberosum HOM05D000350 ORTHO05D000228 5.2e-12 75.9 223 34.1
Thecc.03G167600 Theobroma cacao HOM05D000350 ORTHO05D000228 6.8e-12 75.5 207 34.8
Sabra02G0120400 Salix brachista HOM05D000350 ORTHO05D000228 1.2e-11 74.7 197 32.5
HanXRQChr15g0486311 Helianthus annuus HOM05D000350 ORTHO05D000228 1.5e-11 74.3 196 36.2
TAR629G0049 Trochodendron aralioides HOM05D000350 ORTHO05D000228 2.0e-11 73.9 129 39.5
TWI23G1054 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 2.6e-11 73.6 193 33.7
Manes.01G263300 Manihot esculenta HOM05D000350 ORTHO05D000228 3.4e-11 73.2 201 35.3
Manes.05G041000 Manihot esculenta HOM05D000350 ORTHO05D000228 4.4e-11 72.8 201 32.3
TWI23G0838 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 5.8e-11 72.4 192 34.4
CAN.G1097.6 Capsicum annuum HOM05D000350 ORTHO05D000228 9.8e-11 71.6 224 33.0
PSO478G3717 Papaver somniferum HOM05D000350 ORTHO05D000228 9.8e-11 71.6 205 34.6
Gohir.A11G084100 Gossypium hirsutum HOM05D000350 ORTHO05D000228 2.2e-10 70.5 192 35.4
Gorai.007G094200 Gossypium raimondii HOM05D000350 ORTHO05D000228 2.2e-10 70.5 192 35.4
Dinv28503 Davidia involucrata HOM05D000350 ORTHO05D000228 2.9e-10 70.1 135 38.5
Gohir.D11G088300 Gossypium hirsutum HOM05D000350 ORTHO05D000228 2.9e-10 70.1 192 35.4
Solyc03g006800.1 Solanum lycopersicum HOM05D000350 ORTHO05D000228 3.7e-10 69.7 216 32.9
Haze_16707 Corylus avellana HOM05D000350 ORTHO05D000228 4.9e-10 69.3 192 33.3
Nitab4.5_0000832g0020 Nicotiana tabacum HOM05D000350 ORTHO05D000228 4.9e-10 69.3 206 33.0
Cpa.g.sc4.210 Carica papaya HOM05D000350 ORTHO05D000228 6.4e-10 68.9 218 34.4
PSO063G7323 Papaver somniferum HOM05D000350 ORTHO05D000228 6.4e-10 68.9 214 32.2
TPR.G17388 Trifolium pratense HOM05D000350 ORTHO05D000228 1.1e-09 68.2 206 31.1
Prupe.2G288000 Prunus persica HOM05D000350 ORTHO05D000228 1.4e-09 67.8 228 32.5
Duzib133G0325 Durio zibethinus HOM05D000350 ORTHO05D000228 2.4e-09 67.0 199 35.2
MD02G1196100 Malus domestica HOM05D000350 ORTHO05D000228 2.4e-09 67.0 200 31.0
Ca_10807_v3 Cicer arietinum L. HOM05D000350 ORTHO05D000228 3.2e-09 66.6 200 34.0
Dinv35144 Davidia involucrata HOM05D000350 ORTHO05D000228 4.1e-09 66.2 200 35.0
Lj9C575T8 Lonicera japonica HOM05D000350 ORTHO05D000228 4.1e-09 66.2 175 38.3
Cc04_g00720 Coffea canephora HOM05D000350 ORTHO05D000228 5.4e-09 65.9 220 31.8
Thhalv10001528m.g Eutrema salsugineum HOM05D000350 ORTHO05D000228 5.4e-09 65.9 209 32.5
Prupe.2G152600 Prunus persica HOM05D000350 ORTHO05D000228 5.4e-09 65.9 196 31.1
Rhsim03G0175200 Rhododendron simsii HOM05D000350 ORTHO05D000228 7.0e-09 65.5 196 32.1
Actinidia09581 Actinidia chinensis HOM05D004815 ORTHO05D005742 1.2e-08 64.7 169 33.1
QL08p050936 Quercus lobata HOM05D000350 ORTHO05D000228 1.2e-08 64.7 190 32.6
Thecc.01G370400 Theobroma cacao HOM05D000350 ORTHO05D000228 1.6e-08 64.3 205 34.1
Migut.F00395 Erythranthe guttata HOM05D000350 ORTHO05D000228 2.1e-08 63.9 201 31.3
Nitab4.5_0005379g0040 Nicotiana tabacum HOM05D000350 ORTHO05D000228 2.1e-08 63.9 201 33.8
Atru.chr5.380 Acer truncatum HOM05D000350 ORTHO05D000228 2.7e-08 63.5 153 37.3
Glyma.20G154400 Glycine max HOM05D000350 ORTHO05D000228 2.7e-08 63.5 206 33.5
TWI59G0737 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 2.7e-08 63.5 194 32.5
Medtr1g101810 Medicago truncatula HOM05D000350 ORTHO05D000228 3.5e-08 63.2 208 32.2
Carub.0008s1199 Capsella rubella HOM05D000350 ORTHO05D000228 6.0e-08 62.4 197 31.0
Cfa001811 Carpinus fangiana HOM05D000350 ORTHO05D000228 6.0e-08 62.4 193 33.7
Manes.06G141800 Manihot esculenta HOM05D000350 ORTHO05D000228 6.0e-08 62.4 197 32.0
A05p05640 Brassica napus HOM05D000350 ORTHO05D000228 1.3e-07 61.2 219 31.1
BraA05t19536Z Brassica rapa HOM05D000350 ORTHO05D000228 1.3e-07 61.2 219 31.1
Phvul.007G065900 Phaseolus vulgaris HOM05D000350 ORTHO05D000228 1.3e-07 61.2 199 33.2
Aa31LG1G27150 Aethionema arabicum HOM05D000350 ORTHO05D000228 1.7e-07 60.8 201 26.9
BcaC02g12193 Brassica carinata HOM05D000350 ORTHO05D000228 1.7e-07 60.8 202 33.2
C04p06600 Brassica napus HOM05D000350 ORTHO05D000228 1.7e-07 60.8 202 33.2
Ciclev10005366m.g Citrus clementina HOM05D000350 ORTHO05D000228 1.7e-07 60.8 216 29.2
Duzib138G1603 Durio zibethinus HOM05D000350 ORTHO05D000228 1.7e-07 60.8 201 33.3
AT2G45680 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 2.3e-07 60.5 215 30.7
MELO3C022520.2 Cucumis melo HOM05D000350 ORTHO05D000228 2.3e-07 60.5 196 32.1
CsaV3_6G005960 Cucumis sativus L. HOM05D000350 ORTHO05D000228 2.3e-07 60.5 196 31.6
Psat6g203920 Pisum sativum HOM05D000350 ORTHO05D000228 2.3e-07 60.5 212 31.6
BolC4t22282H Brassica oleracea HOM05D000350 ORTHO05D000228 3.0e-07 60.1 208 30.8
Lj5g0019599 Lotus japonicus HOM05D000350 ORTHO05D000228 3.9e-07 59.7 212 32.1
Oeu004144.1 Olea europaea HOM05D000350 ORTHO05D000228 3.9e-07 59.7 181 33.7
CiPaw.01G257700 Carya illinoinensis HOM05D000350 ORTHO05D000228 5.0e-07 59.3 192 32.8
arahy.Tifrunner.gnm1.ann1.CX086V Arachis hypogaea HOM05D000350 ORTHO05D000228 1.1e-06 58.2 193 31.6
ClCG05G007740 Citrullus lanatus HOM05D000350 ORTHO05D000228 1.1e-06 58.2 209 32.5
MD00G1004900 Malus domestica HOM05D000350 ORTHO05D000228 2.5e-06 57.0 212 29.2
PGR031G3501 Punica granatum HOM05D000350 ORTHO05D000228 3.3e-06 56.6 205 32.2
SGA_v2.0_scaffold2G01093 Striga asiatica HOM05D000350 ORTHO05D000228 3.3e-06 56.6 208 31.2
VMungo0720G2977 Vigna mungo HOM05D000350 ORTHO05D000228 3.3e-06 56.6 205 34.1
CARHR140900 Cardamine hirsuta HOM05D000350 ORTHO05D000228 4.3e-06 56.2 212 30.7
CsaV3_3G016680 Cucumis sativus L. HOM05D000350 ORTHO05D000228 4.3e-06 56.2 210 31.9
Sabra15G0149300 Salix brachista HOM05D000350 ORTHO05D000228 4.3e-06 56.2 212 30.2
MSTRG.8778 Avicennia marina HOM05D000350 ORTHO05D000228 5.6e-06 55.8 167 31.7
CANSAT56G2359 Cannabis sativa HOM05D000350 ORTHO05D000228 5.6e-06 55.8 164 31.1
AL8G26220 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 7.3e-06 55.5 196 29.1
BcaB01g03259 Brassica carinata HOM05D000350 ORTHO05D000228 9.5e-06 55.1 211 31.8
Ca_23775_v3 Cicer arietinum L. HOM05D000350 ORTHO05D000228 9.5e-06 55.1 218 25.7
Sp4g27720 Schrenkiella parvula HOM05D000350 ORTHO05D000228 9.5e-06 55.1 217 29.0


User provided reference genes

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