Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.1e-184 649.8 337 100.0
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 2.7e-162 575.5 337 90.5
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 3.0e-161 572.0 338 89.9
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.4e-158 563.1 339 85.5
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 2.4e-158 562.4 338 88.5
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 4.2e-155 551.6 301 94.7
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 3.6e-146 521.9 332 78.3
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 1.5e-141 506.5 325 80.3
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.1e-139 500.4 336 77.1
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.6e-138 496.5 337 74.8
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 2.1e-138 496.1 330 76.7
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 2.7e-138 495.7 336 75.6
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.0e-137 493.8 338 77.2
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 7.4e-136 487.6 335 73.4
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 9.7e-136 487.3 335 74.6
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 8.2e-135 484.2 333 72.1
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 8.2e-135 484.2 370 70.0
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 1.4e-134 483.4 330 75.2
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 2.4e-134 482.6 335 73.4
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 7.0e-134 481.1 338 75.1
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 7.0e-134 481.1 336 74.4
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 9.1e-134 480.7 338 75.4
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 3.5e-133 478.8 336 74.1
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 3.5e-133 478.8 336 73.8
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.3e-132 476.9 338 74.3
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.7e-132 476.5 347 71.2
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 2.9e-132 475.7 327 74.6
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 3.8e-132 475.3 334 73.4
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 5.0e-132 474.9 338 73.1
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 8.5e-132 474.2 336 73.2
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 5.5e-131 471.5 334 73.1
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 7.2e-131 471.1 336 71.7
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 9.4e-131 470.7 334 73.4
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.6e-130 469.9 338 72.5
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 1.6e-130 469.9 338 72.2
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 2.1e-130 469.5 337 71.2
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 2.7e-130 469.2 329 72.3
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 1.4e-129 466.8 334 72.8
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 1.8e-129 466.5 337 70.9
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 4.0e-129 465.3 329 72.3
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 5.2e-129 464.9 334 72.5
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 5.2e-129 464.9 337 70.6
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 5.2e-129 464.9 330 71.2
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 1.5e-128 463.4 338 70.1
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 2.6e-128 462.6 332 71.1
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 7.5e-128 461.1 330 70.3
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.7e-127 459.9 334 71.6
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 1.7e-127 459.9 330 70.3
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.7e-127 459.9 339 70.8
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.7e-127 459.9 323 73.1
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 2.8e-127 459.1 330 72.1
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 2.8e-127 459.1 338 69.5
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 3.7e-127 458.8 339 70.8
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 4.8e-127 458.4 334 70.1
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 2.4e-126 456.1 340 68.5
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 3.1e-126 455.7 332 70.2
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 3.1e-126 455.7 334 70.7
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 3.1e-126 455.7 336 71.7
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 4.1e-126 455.3 337 70.9
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 1.2e-125 453.8 336 69.3
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.6e-125 453.4 339 69.9
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 2.0e-125 453.0 327 71.9
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.3e-124 450.3 330 69.7
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 2.2e-124 449.5 336 68.5
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 2.2e-124 449.5 335 68.7
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 2.9e-124 449.1 352 68.2
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 5.0e-124 448.4 321 72.3
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 5.0e-124 448.4 330 69.4
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 1.9e-123 446.4 305 75.7
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 3.2e-123 445.7 332 68.1
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 4.2e-123 445.3 322 69.6
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 7.2e-123 444.5 322 69.6
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.1e-122 443.0 347 67.1
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 3.6e-122 442.2 336 70.5
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 2.3e-121 439.5 333 69.4
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 4.1e-118 428.7 256 89.1
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 7.7e-117 424.5 336 67.9
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 7.7e-117 424.5 399 60.4
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 5.0e-116 421.8 336 66.4
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 7.2e-115 417.9 328 66.5
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 5.2e-113 411.8 326 66.3
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 7.0e-110 401.4 283 74.2
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.1e-107 394.0 336 64.3
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.1e-107 394.0 330 65.5
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 9.5e-107 391.0 334 63.2
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 8.6e-100 367.9 333 60.4
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.5e-99 367.1 333 58.6
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 7.3e-99 364.8 340 58.2
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.3e-95 354.0 326 55.5
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 5.2e-89 332.0 330 52.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 7.1e-86 321.6 322 50.9
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 3.3e-83 312.8 208 77.9
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 2.8e-82 309.7 198 77.8
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 4.7e-82 308.9 243 65.4
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.4e-81 306.6 326 50.3
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.2e-77 294.3 326 47.5
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 2.7e-77 293.1 181 80.7
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 1.9e-70 270.4 202 73.3
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 1.5e-67 260.8 371 46.1
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 8.1e-66 255.0 325 46.5
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.1e-65 254.6 326 42.9
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 9.0e-65 251.5 219 61.2
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 2.2e-63 246.9 171 72.5
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 6.7e-60 235.3 353 39.4
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 1.3e-58 231.1 153 76.5
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.6e-45 186.0 171 50.9
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 6.7e-44 182.2 306 42.2
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.5e-43 181.0 301 42.2
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 5.7e-43 179.1 331 35.0
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 3.1e-41 173.3 125 73.6
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 3.7e-34 149.8 124 62.9
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 3.2e-30 136.7 89 76.4
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 5.5e-22 109.4 76 68.4
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 5.2e-20 102.8 338 26.6
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 4.7e-13 79.7 59 67.8
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 2.7e-08 63.9 70 54.3
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 2.7e-08 63.9 70 54.3


User provided reference genes

Program Settings