Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 4.2e-83 311.6 192 100.0
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 5.3e-70 268.1 192 89.1
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 1.9e-59 233.0 197 73.1
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 5.3e-54 214.9 185 73.5
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 6.9e-54 214.5 179 74.3
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 1.5e-53 213.4 184 73.4
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 2.2e-47 193.0 184 65.8
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 9.1e-46 187.6 178 63.5
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 8.5e-44 181.0 181 70.7
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 1.1e-43 180.6 190 56.8
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 9.4e-43 177.6 195 59.0
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 2.6e-40 169.5 170 61.2
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.8e-38 163.3 181 56.4
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 9.1e-38 161.0 173 57.2
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.2e-37 160.6 168 57.1
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 4.5e-37 158.7 167 56.9
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 1.7e-36 156.8 178 52.8
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.2e-36 156.4 158 60.1
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 2.2e-36 156.4 159 66.7
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 2.2e-36 156.4 173 55.5
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 5.0e-36 155.2 185 55.1
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 1.1e-35 154.1 191 55.0
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 1.1e-35 154.1 190 52.6
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 4.2e-35 152.1 184 54.9
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 5.5e-35 151.8 197 50.3
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 7.2e-35 151.4 184 51.6
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 9.4e-35 151.0 165 58.2
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 2.7e-34 149.4 188 50.0
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 3.6e-34 149.1 171 53.2
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 4.7e-34 148.7 206 48.1
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 8.0e-34 147.9 180 55.6
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 8.0e-34 147.9 185 52.4
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 1.0e-33 147.5 152 56.6
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 1.0e-33 147.5 173 56.6
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 3.0e-33 146.0 189 49.7
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 3.0e-33 146.0 165 53.9
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 1.2e-32 144.1 150 53.3
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 2.0e-32 143.3 181 51.9
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 5.7e-32 141.7 171 53.8
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 9.7e-32 141.0 216 50.0
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.3e-31 140.6 190 47.4
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.3e-31 140.6 191 48.2
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 1.3e-31 140.6 226 44.7
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 2.2e-31 139.8 225 47.1
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 2.2e-31 139.8 181 51.4
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 2.8e-31 139.4 190 48.9
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 4.8e-31 138.7 185 49.2
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 4.8e-31 138.7 185 49.2
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 8.2e-31 137.9 187 47.6
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 8.2e-31 137.9 178 51.1
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.1e-30 137.5 186 48.9
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.1e-30 137.5 186 47.8
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 1.4e-30 137.1 189 46.0
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 1.4e-30 137.1 197 47.2
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.8e-30 136.7 184 50.5
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 2.4e-30 136.3 163 60.1
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.4e-30 136.3 185 54.1
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 4.1e-30 135.6 175 48.6
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 4.1e-30 135.6 167 51.5
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 5.3e-30 135.2 231 42.0
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 5.3e-30 135.2 184 46.7
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 7.0e-30 134.8 167 50.9
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 9.1e-30 134.4 232 41.8
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 9.1e-30 134.4 182 46.2
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 2.7e-29 132.9 202 44.6
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 3.5e-29 132.5 165 52.7
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 4.5e-29 132.1 191 47.6
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 4.5e-29 132.1 172 48.8
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 5.9e-29 131.7 176 47.7
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 5.9e-29 131.7 145 51.7
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 1.3e-28 130.6 188 46.8
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 1.3e-28 130.6 188 46.3
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 1.3e-28 130.6 185 48.6
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 2.2e-28 129.8 145 61.4
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 5.0e-28 128.6 186 45.2
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 8.5e-28 127.9 141 50.4
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 1.1e-27 127.5 175 47.4
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 1.5e-27 127.1 175 47.4
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.5e-27 127.1 189 43.9
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 7.2e-27 124.8 199 41.7
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 7.2e-27 124.8 171 48.0
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 2.1e-26 123.2 189 41.3
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 2.1e-26 123.2 163 52.1
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 6.1e-26 121.7 198 43.9
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.8e-25 120.2 184 50.5
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 2.3e-25 119.8 210 42.4
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 3.0e-25 119.4 183 45.4
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 1.5e-24 117.1 176 45.5
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 2.6e-24 116.3 164 47.0
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 3.7e-23 112.5 165 52.1
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 6.3e-23 111.7 156 46.2
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 1.1e-22 110.9 124 60.5
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 1.3e-20 104.0 155 45.2
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 3.8e-20 102.4 182 40.7
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 6.6e-20 101.7 179 40.2
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 6.6e-20 101.7 179 40.2
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 1.2e-18 97.4 179 40.8
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 1.6e-18 97.1 191 39.8
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 3.6e-18 95.9 179 40.8
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 6.1e-18 95.1 179 40.2
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.0e-17 94.4 163 44.2
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 8.9e-17 91.3 124 46.8
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.2e-16 90.9 176 36.9
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.5e-16 90.5 176 37.5
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 1.3e-15 87.4 168 40.5
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 3.7e-15 85.9 195 36.4
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 4.9e-15 85.5 107 50.5
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.6e-13 80.5 92 56.5
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 4.5e-13 79.0 66 65.2
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 7.8e-13 78.2 46 82.6
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 6.6e-12 75.1 149 38.3
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 3.1e-09 66.2 69 56.5
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 5.2e-09 65.5 143 37.8
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 6.8e-09 65.1 120 45.0
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.2e-08 64.3 176 34.7
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 9.8e-08 61.2 201 33.8
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 1.3e-07 60.8 60 58.3
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 2.2e-07 60.1 144 32.6
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 1.1e-06 57.8 74 51.4


User provided reference genes

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