Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.6e-135 486.1 249 100.0
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.1e-127 459.1 249 94.0
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 2.5e-104 382.5 245 81.2
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 2.1e-103 379.4 247 78.1
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 1.0e-102 377.1 247 77.3
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 1.4e-102 376.7 247 77.7
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 1.4e-102 376.7 247 76.9
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 3.4e-53 212.6 253 49.4
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 1.6e-50 203.8 254 45.3
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 7.4e-48 194.9 225 49.3
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 7.4e-48 194.9 249 46.6
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 2.4e-46 189.9 231 46.3
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 9.0e-46 188.0 251 44.2
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 7.1e-43 178.3 253 40.3
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 7.9e-42 174.9 219 47.5
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.0e-41 174.5 251 45.0
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 2.3e-41 173.3 251 42.2
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 3.0e-41 172.9 248 42.3
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.1e-40 171.0 262 42.7
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 1.1e-40 171.0 257 39.7
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 1.9e-40 170.2 259 38.6
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 1.9e-40 170.2 256 41.8
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 2.5e-40 169.9 266 40.2
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 2.8e-39 166.4 261 41.0
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 6.3e-39 165.2 262 42.4
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 1.1e-38 164.5 263 38.4
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.4e-38 164.1 261 39.1
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 4.1e-38 162.5 271 41.3
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 4.5e-37 159.1 257 38.5
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 4.5e-37 159.1 247 42.1
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.0e-36 157.9 265 38.9
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 2.9e-36 156.4 265 38.1
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 5.0e-36 155.6 261 40.6
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 5.0e-36 155.6 230 40.4
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 1.9e-35 153.7 267 40.1
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 2.5e-35 153.3 249 39.4
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 3.2e-35 152.9 253 40.3
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 3.2e-35 152.9 266 37.6
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 4.2e-35 152.5 250 39.2
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 4.2e-35 152.5 260 40.4
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 1.2e-34 151.0 259 41.7
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 2.1e-34 150.2 260 40.8
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 2.1e-34 150.2 259 38.2
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 2.1e-34 150.2 257 39.7
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.7e-34 149.8 199 44.2
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 6.1e-34 148.7 265 37.4
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 1.4e-33 147.5 260 40.8
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 1.4e-33 147.5 260 40.8
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 3.0e-33 146.4 254 39.8
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 6.7e-33 145.2 266 37.2
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 1.1e-32 144.4 248 39.1
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 2.5e-32 143.3 215 38.6
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 3.3e-32 142.9 220 41.8
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 5.7e-32 142.1 251 37.1
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 5.7e-32 142.1 260 40.0
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 9.7e-32 141.4 254 37.8
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 2.2e-31 140.2 199 47.7
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.8e-31 139.8 261 37.2
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 8.2e-31 138.3 279 35.5
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 1.4e-30 137.5 235 37.4
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.8e-30 137.1 285 36.1
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 2.4e-30 136.7 228 40.8
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 2.4e-30 136.7 267 36.3
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 4.1e-30 136.0 240 40.0
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 4.1e-30 136.0 271 35.8
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.5e-29 134.0 235 39.1
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.5e-29 134.0 258 35.7
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.5e-29 132.5 262 35.9
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 5.9e-29 132.1 260 38.8
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 1.0e-28 131.3 253 37.2
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.3e-28 131.0 239 37.7
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.3e-28 131.0 258 34.5
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 5.0e-28 129.0 247 36.8
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 1.4e-27 127.5 251 36.7
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 1.4e-27 127.5 223 38.1
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 2.7e-26 123.2 227 37.4
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 2.7e-26 123.2 218 38.1
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 5.7e-24 115.5 105 58.1
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 7.4e-24 115.2 274 33.6
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 1.3e-23 114.4 129 47.3
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 3.7e-23 112.8 245 34.3
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.7e-20 104.0 95 51.6
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 9.4e-19 98.2 83 55.4
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 9.4e-19 98.2 82 54.9
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 1.6e-18 97.4 129 43.4
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 1.6e-18 97.4 80 56.2
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 2.1e-18 97.1 82 54.9
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 2.1e-18 97.1 82 54.9
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 2.1e-18 97.1 82 54.9
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 2.1e-18 97.1 80 53.8
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 3.6e-18 96.3 84 54.8
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 6.1e-18 95.5 129 42.6
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 6.1e-18 95.5 129 42.6
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 6.1e-18 95.5 225 34.2
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 8.0e-18 95.1 231 29.9
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 1.0e-17 94.7 128 41.4
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 3.0e-17 93.2 82 53.7
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 3.9e-17 92.8 128 40.6
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 9.7e-16 88.2 85 50.6
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 2.2e-12 77.0 94 44.7
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.0e-09 68.2 67 47.8
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 2.2e-07 60.5 92 42.4
CANSAT01G2027 Cannabis sativa HOM05D002304 ORTHO05D002363 1.1e-06 58.2 60 45.0
Manes.09G186400 Manihot esculenta HOM05D002304 ORTHO05D002363 1.1e-06 58.2 65 41.5
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 1.4e-06 57.8 56 50.0
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 1.4e-06 57.8 63 41.3
QL03p049930 Quercus lobata HOM05D002304 ORTHO05D002363 1.4e-06 57.8 86 32.6
Sabra01G0045200 Salix brachista HOM05D002304 ORTHO05D002363 2.4e-06 57.0 73 42.5
Aqoxy5G03199 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 4.1e-06 56.2 74 41.9
EL10Ac6g13591 Beta vulgaris HOM05D002304 ORTHO05D002363 4.1e-06 56.2 80 37.5
Haze_12481 Corylus avellana HOM05D002304 ORTHO05D002363 5.3e-06 55.8 65 38.5
Potri.001G062800 Populus trichocarpa HOM05D002304 ORTHO05D002363 5.3e-06 55.8 67 43.3
Potri.003G164600 Populus trichocarpa HOM05D002304 ORTHO05D002363 5.3e-06 55.8 67 43.3
Sabra03G0119800 Salix brachista HOM05D002304 ORTHO05D002363 5.3e-06 55.8 67 43.3
Eucgr.G01957 Eucalyptus grandis HOM05D002304 ORTHO05D002363 7.0e-06 55.5 57 45.6
Hund25504 Selenicereus undatus HOM05D002304 ORTHO05D002363 7.0e-06 55.5 83 36.1
vmacro16079 Vaccinium macrocarpon HOM05D002304 ORTHO05D002363 7.0e-06 55.5 57 45.6
VMungo1383G0264 Vigna mungo HOM05D002304 ORTHO05D002363 7.0e-06 55.5 69 40.6
Aqoxy5G03200 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 9.1e-06 55.1 74 41.9
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 9.1e-06 55.1 69 40.6


User provided reference genes

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