Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012264g0010 Nicotiana tabacum HOM05D002383 ORTHO05D002515 1.4e-48 196.1 105 100.0
Nitab4.5_0000007g0020 Nicotiana tabacum HOM05D002383 ORTHO05D002515 9.4e-37 156.8 93 88.2
CSS0034273 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 2.7e-12 75.5 88 48.9
MSTRG.7920 Avicennia marina HOM05D002383 ORTHO05D002515 8.0e-12 73.9 77 53.2
Haze_12239 Corylus avellana HOM05D002383 ORTHO05D002515 1.4e-11 73.2 87 50.6
TWI56G1026 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 3.0e-11 72.0 88 45.5
Migut.K01394 Erythranthe guttata HOM05D002383 ORTHO05D002515 5.2e-11 71.2 89 47.2
Hma1.2p1_0223F.1_g094100 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 5.2e-11 71.2 82 48.8
Rhsim12G0112000 Rhododendron simsii HOM05D002383 ORTHO05D002515 5.2e-11 71.2 75 50.7
Peaxi162Scf00128g00012 Petunia axillaris HOM05D002383 ORTHO05D002515 6.8e-11 70.9 90 55.6
CSS0031549 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 8.8e-11 70.5 78 51.3
MSTRG.570 Avicennia marina HOM05D002383 ORTHO05D002515 1.2e-10 70.1 89 50.6
Cfa009202 Carpinus fangiana HOM05D002383 ORTHO05D002515 1.2e-10 70.1 88 51.1
Potri.010G045200 Populus trichocarpa HOM05D002383 ORTHO05D002515 1.2e-10 70.1 88 47.7
Prupe.1G243100 Prunus persica HOM05D002383 ORTHO05D002515 1.2e-10 70.1 89 46.1
Ciclev10017241m.g Citrus clementina HOM05D002383 ORTHO05D002515 1.5e-10 69.7 90 46.7
Potri.017G070000 Populus trichocarpa HOM05D002383 ORTHO05D002515 1.5e-10 69.7 88 46.6
Glyma.18G143300 Glycine max HOM05D002383 ORTHO05D002515 2.0e-10 69.3 88 43.2
CiPaw.06G068500 Carya illinoinensis HOM05D002383 ORTHO05D002515 3.4e-10 68.6 87 48.3
Lalb_Chr09g0334821 Lupinus albus HOM05D002383 ORTHO05D002515 3.4e-10 68.6 86 45.3
Manes.12G024000 Manihot esculenta HOM05D002383 ORTHO05D002515 4.4e-10 68.2 88 45.5
Thecc.02G258100 Theobroma cacao HOM05D002383 ORTHO05D002515 4.4e-10 68.2 76 52.6
CANSAT01G0072 Cannabis sativa HOM05D002383 ORTHO05D002515 5.7e-10 67.8 111 42.3
RcHm_v2.0_Chr2g0172811 Rosa chinensis HOM05D002383 ORTHO05D002515 5.7e-10 67.8 88 45.5
FAN02G4557 Fragaria x ananassa HOM05D002383 ORTHO05D002515 9.8e-10 67.0 88 43.2
Glyma.01G026600 Glycine max HOM05D002383 ORTHO05D002515 9.8e-10 67.0 88 46.6
Atru.chr11.2114 Acer truncatum HOM05D002383 ORTHO05D002515 1.3e-09 66.6 93 46.2
Atru.chr11.2129 Acer truncatum HOM05D002383 ORTHO05D002515 1.3e-09 66.6 93 46.2
Cc11_g15590 Coffea canephora HOM05D002383 ORTHO05D002515 1.3e-09 66.6 88 52.3
Potri.008G187300 Populus trichocarpa HOM05D002383 ORTHO05D002515 1.3e-09 66.6 89 43.8
Atru.chr6.2391 Acer truncatum HOM05D002383 ORTHO05D002515 1.7e-09 66.2 86 53.5
FAN05G3597 Fragaria x ananassa HOM05D002383 ORTHO05D002515 1.7e-09 66.2 88 43.2
Psat1g054720 Pisum sativum HOM05D002383 ORTHO05D002515 1.7e-09 66.2 87 49.4
CSS0011711 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 2.2e-09 65.9 89 49.4
FvH4_6g51230 Fragaria vesca HOM05D002383 ORTHO05D002515 2.2e-09 65.9 88 43.2
FAN14G3744 Fragaria x ananassa HOM05D002383 ORTHO05D002515 2.2e-09 65.9 88 43.2
Hma1.2p1_0160F.1_g071240 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 2.2e-09 65.9 70 51.4
Manes.15G150600 Manihot esculenta HOM05D002383 ORTHO05D002515 2.2e-09 65.9 88 47.7
Rhsim10G0017000 Rhododendron simsii HOM05D002383 ORTHO05D002515 2.2e-09 65.9 85 48.2
MSTRG.3147 Avicennia marina HOM05D002383 ORTHO05D002515 2.8e-09 65.5 88 46.6
MD13G1102700 Malus domestica HOM05D002383 ORTHO05D002515 2.8e-09 65.5 90 44.4
Manes.13G025600 Manihot esculenta HOM05D002383 ORTHO05D002515 2.8e-09 65.5 87 46.0
Nitab4.5_0008365g0010 Nicotiana tabacum HOM05D002383 ORTHO05D002515 2.8e-09 65.5 92 42.4
Sabra17G0061800 Salix brachista HOM05D002383 ORTHO05D002515 2.8e-09 65.5 88 46.6
COL.COLO4_29113 Corchorus olitorius HOM05D002383 ORTHO05D002515 3.7e-09 65.1 85 47.1
Lalb_Chr05g0216591 Lupinus albus HOM05D002383 ORTHO05D002515 3.7e-09 65.1 87 44.8
Manes.17G112300 Manihot esculenta HOM05D002383 ORTHO05D002515 3.7e-09 65.1 89 46.1
TWI12G0144 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 3.7e-09 65.1 88 44.3
Hma1.2p1_2120F.1_g314410 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 4.9e-09 64.7 90 44.4
Sed0020664 Sechium edule HOM05D002383 ORTHO05D002515 4.9e-09 64.7 89 47.2
Thecc.04G017100 Theobroma cacao HOM05D002383 ORTHO05D002515 4.9e-09 64.7 88 45.5
MBI16_g23839_MAGBIO Magnolia biondii HOM05D002383 ORTHO05D002515 6.3e-09 64.3 89 48.3
TAR371G1055 Trochodendron aralioides HOM05D002383 ORTHO05D002515 6.3e-09 64.3 87 47.1
MSTRG.24037 Avicennia marina HOM05D002383 ORTHO05D002515 8.3e-09 63.9 89 46.1
CiPaw.05G183200 Carya illinoinensis HOM05D002383 ORTHO05D002515 8.3e-09 63.9 87 47.1
Duzib187G0948 Durio zibethinus HOM05D002383 ORTHO05D002515 8.3e-09 63.9 88 45.5
Migut.H00078 Erythranthe guttata HOM05D002383 ORTHO05D002515 8.3e-09 63.9 85 45.9
Glyma.02G038200 Glycine max HOM05D002383 ORTHO05D002515 8.3e-09 63.9 88 45.5
Nn3g16740 Nelumbo nucifera HOM05D002383 ORTHO05D002515 8.3e-09 63.9 88 47.7
PGR142G2811 Punica granatum HOM05D002383 ORTHO05D002515 8.3e-09 63.9 88 46.6
SalBow7G3295 Salvia bowleyana HOM05D002383 ORTHO05D002515 8.3e-09 63.9 89 43.8
SalBow8G3288 Salvia bowleyana HOM05D002383 ORTHO05D002515 1.1e-08 63.5 86 47.7
SGA_v2.0_scaffold18G08279 Striga asiatica HOM05D002383 ORTHO05D002515 1.1e-08 63.5 89 43.8
Aqoxy5G03793 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 1.4e-08 63.2 87 41.4
COL.COLO4_24249 Corchorus olitorius HOM05D002383 ORTHO05D002515 1.4e-08 63.2 78 43.6
Duzib264G1049 Durio zibethinus HOM05D002383 ORTHO05D002515 1.4e-08 63.2 85 47.1
Sed0014920 Sechium edule HOM05D002383 ORTHO05D002515 1.4e-08 63.2 89 50.6
CSS0002762 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 1.8e-08 62.8 89 47.2
Migut.E00196 Erythranthe guttata HOM05D002383 ORTHO05D002515 1.8e-08 62.8 90 48.9
TPR.G34660 Trifolium pratense HOM05D002383 ORTHO05D002515 1.8e-08 62.8 87 40.2
TAR374G1253 Trochodendron aralioides HOM05D002383 ORTHO05D002515 1.8e-08 62.8 76 47.4
BcaB06g27511 Brassica carinata HOM05D002383 ORTHO05D002515 2.4e-08 62.4 85 43.5
Ca_04169_v3 Cicer arietinum L. HOM05D002383 ORTHO05D002515 2.4e-08 62.4 87 48.3
Duzib248G0824 Durio zibethinus HOM05D002383 ORTHO05D002515 2.4e-08 62.4 75 44.0
Medtr8g069510 Medicago truncatula HOM05D002383 ORTHO05D002515 2.4e-08 62.4 88 38.6
Sp7g01460 Schrenkiella parvula HOM05D002383 ORTHO05D002515 2.4e-08 62.4 85 44.7
C04p47260 Brassica napus HOM05D002383 ORTHO05D002515 3.1e-08 62.0 85 42.4
BolC4t26325H Brassica oleracea HOM05D002383 ORTHO05D002515 3.1e-08 62.0 85 42.4
Nitab4.5_0005022g0010 Nicotiana tabacum HOM05D002383 ORTHO05D002515 3.1e-08 62.0 90 42.2
TWI36G1091 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 3.1e-08 62.0 85 45.9
BraA04t17007Z Brassica rapa HOM05D002383 ORTHO05D002515 4.1e-08 61.6 85 42.4
CANSAT64G1350 Cannabis sativa HOM05D002383 ORTHO05D002515 4.1e-08 61.6 100 51.0
Duzib268G1316 Durio zibethinus HOM05D002383 ORTHO05D002515 4.1e-08 61.6 74 50.0
Eucgr.I01742 Eucalyptus grandis HOM05D002383 ORTHO05D002515 4.1e-08 61.6 92 41.3
Glyma.08G282900 Glycine max HOM05D002383 ORTHO05D002515 4.1e-08 61.6 105 45.7
Nn4g22639 Nelumbo nucifera HOM05D002383 ORTHO05D002515 4.1e-08 61.6 88 46.6
Rhsim08G0050700 Rhododendron simsii HOM05D002383 ORTHO05D002515 4.1e-08 61.6 89 43.8
Sabra08G0141800 Salix brachista HOM05D002383 ORTHO05D002515 4.1e-08 61.6 90 42.2
Lsat_1_v5_gn_4_183900 Lactuca sativa HOM05D002383 ORTHO05D002515 5.4e-08 61.2 89 47.2
Lj4g0012935 Lotus japonicus HOM05D002383 ORTHO05D002515 5.4e-08 61.2 69 49.3
Medtr6g005250 Medicago truncatula HOM05D002383 ORTHO05D002515 5.4e-08 61.2 87 47.1
Sabra10G0023100 Salix brachista HOM05D001342 ORTHO05D001286 5.4e-08 61.2 96 44.8
Aa31LG9G1160 Aethionema arabicum HOM05D002383 ORTHO05D002515 7.0e-08 60.8 87 41.4
SalBow1G3310 Salvia bowleyana HOM05D002383 ORTHO05D002515 7.0e-08 60.8 89 43.8
Gorai.005G179500 Gossypium raimondii HOM05D002383 ORTHO05D002515 9.2e-08 60.5 69 49.3
TAR629G2295 Trochodendron aralioides HOM05D002383 ORTHO05D002515 9.2e-08 60.5 88 44.3
Gohir.D02G159400 Gossypium hirsutum HOM05D002383 ORTHO05D002515 1.2e-07 60.1 75 46.7
Thhalv10028250m.g Eutrema salsugineum HOM05D002383 ORTHO05D002515 1.6e-07 59.7 87 37.9
MD17G1027200 Malus domestica HOM05D002383 ORTHO05D002515 1.6e-07 59.7 88 42.0
Oeu036541.1 Olea europaea HOM05D002383 ORTHO05D002515 1.6e-07 59.7 89 43.8
VMungo0251G0034 Vigna mungo HOM05D002383 ORTHO05D002515 1.6e-07 59.7 87 40.2
VMungo1215G0977 Vigna mungo HOM05D002383 ORTHO05D002515 1.6e-07 59.7 95 49.5
A04p13490 Brassica napus HOM05D002383 ORTHO05D002515 2.0e-07 59.3 85 41.2
Gohir.A03G136100 Gossypium hirsutum HOM05D002383 ORTHO05D002515 2.0e-07 59.3 87 44.8
HanXRQChr15g0475321 Helianthus annuus HOM05D002383 ORTHO05D002515 2.0e-07 59.3 85 42.4
Lsat_1_v5_gn_2_91461 Lactuca sativa HOM05D002383 ORTHO05D002515 2.0e-07 59.3 89 43.8
Lj2g0006785 Lotus japonicus HOM05D002383 ORTHO05D002515 2.0e-07 59.3 88 44.3
PSO782G0538 Papaver somniferum HOM05D002383 ORTHO05D002515 2.0e-07 59.3 72 47.2
Prupe.3G291500 Prunus persica HOM05D002383 ORTHO05D002515 2.0e-07 59.3 88 45.5
QL03p058475 Quercus lobata HOM05D002383 ORTHO05D002515 2.0e-07 59.3 87 41.4
TAR622G1076 Trochodendron aralioides HOM05D002383 ORTHO05D002515 2.0e-07 59.3 88 45.5
Actinidia05994 Actinidia chinensis HOM05D002383 ORTHO05D002515 2.7e-07 58.9 70 47.1
MELO3C021579.2 Cucumis melo HOM05D002383 ORTHO05D002515 2.7e-07 58.9 89 43.8
Eucgr.B03299 Eucalyptus grandis HOM05D002383 ORTHO05D002515 2.7e-07 58.9 89 39.3
Phvul.003G064100 Phaseolus vulgaris HOM05D002383 ORTHO05D002515 2.7e-07 58.9 87 39.1
Sp2g03960 Schrenkiella parvula HOM05D002383 ORTHO05D002515 2.7e-07 58.9 88 43.2
CARHR261560 Cardamine hirsuta HOM05D002383 ORTHO05D002515 3.5e-07 58.5 89 40.4
DCAR_007058 Daucus carota HOM05D002383 ORTHO05D002515 3.5e-07 58.5 70 54.3
Nitab4.5_0002468g0100 Nicotiana tabacum HOM05D002383 ORTHO05D002515 3.5e-07 58.5 92 43.5
PGSC0003DMG400006915 Solanum tuberosum HOM05D002383 ORTHO05D002515 3.5e-07 58.5 89 42.7
SGA_v2.0_scaffold224G42989 Striga asiatica HOM05D002383 ORTHO05D002515 3.5e-07 58.5 88 44.3
TWI18G1125 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 3.5e-07 58.5 87 41.4
Aqoxy3G01198 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 4.5e-07 58.2 87 48.3
MD09G1027300 Malus domestica HOM05D002383 ORTHO05D002515 4.5e-07 58.2 88 40.9
Lsat_1_v5_gn_0_39801 Lactuca sativa HOM05D002383 ORTHO05D002515 5.9e-07 57.8 89 47.2
Phvul.002G150700 Phaseolus vulgaris HOM05D002383 ORTHO05D002515 5.9e-07 57.8 89 42.7
Psat4g115800 Pisum sativum HOM05D002383 ORTHO05D002515 5.9e-07 57.8 93 37.6
CARHR010870 Cardamine hirsuta HOM05D002383 ORTHO05D002515 7.7e-07 57.4 80 45.0
ClCG09G019250 Citrullus lanatus HOM05D002383 ORTHO05D002515 7.7e-07 57.4 89 43.8
CsaV3_5G027140 Cucumis sativus L. HOM05D002383 ORTHO05D002515 7.7e-07 57.4 89 43.8
FAN07G2594 Fragaria x ananassa HOM05D002383 ORTHO05D002515 7.7e-07 57.4 71 43.7
Lalb_Chr02g0160501 Lupinus albus HOM05D002383 ORTHO05D002515 7.7e-07 57.4 86 45.3
Lalb_Chr09g0326151 Lupinus albus HOM05D002383 ORTHO05D002515 7.7e-07 57.4 87 40.2
Thhalv10009472m.g Eutrema salsugineum HOM05D002383 ORTHO05D002515 1.0e-06 57.0 89 43.8
Lalb_Chr05g0228391 Lupinus albus HOM05D002383 ORTHO05D002515 1.0e-06 57.0 84 44.0
PSO675G5790 Papaver somniferum HOM05D002383 ORTHO05D002515 1.0e-06 57.0 75 45.3
RcHm_v2.0_Chr4g0432781 Rosa chinensis HOM05D002383 ORTHO05D002515 1.0e-06 57.0 78 41.0
SGA_v2.0_scaffold135G34905 Striga asiatica HOM05D002383 ORTHO05D002515 1.0e-06 57.0 89 41.6
AL2G15780 Arabidopsis lyrata HOM05D002383 ORTHO05D002515 1.3e-06 56.6 88 44.3
FAN22G0427 Fragaria x ananassa HOM05D002383 ORTHO05D002515 1.3e-06 56.6 72 43.1
PSO478G4643 Papaver somniferum HOM05D002383 ORTHO05D002515 1.3e-06 56.6 72 45.8
PGSC0003DMG400018626 Solanum tuberosum HOM05D059959 ORTHO05D051309 1.3e-06 56.6 73 52.1
TPR.G14081 Trifolium pratense HOM05D002383 ORTHO05D002515 1.3e-06 56.6 89 43.8
Duzib251G0524 Durio zibethinus HOM05D002383 ORTHO05D002515 1.7e-06 56.2 78 44.9
FAN17G0502 Fragaria x ananassa HOM05D002383 ORTHO05D002515 1.7e-06 56.2 72 41.7
TWI75G1208 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 1.7e-06 56.2 87 43.7
VMungo0464G1703 Vigna mungo HOM05D002383 ORTHO05D002515 1.7e-06 56.2 70 51.4
AT5G40460 Arabidopsis thaliana HOM05D002383 ORTHO05D002515 2.3e-06 55.8 90 38.9
Lj2g0014954 Lotus japonicus HOM05D002383 ORTHO05D002515 2.3e-06 55.8 99 44.4
MD16G1102900 Malus domestica HOM05D002383 ORTHO05D002515 2.3e-06 55.8 81 44.4
Sc03g0007450 Simmondsia chinensis HOM05D002383 ORTHO05D002515 2.3e-06 55.8 82 36.6
Solyc02g067810.1 Solanum lycopersicum HOM05D002383 ORTHO05D002515 2.3e-06 55.8 89 41.6
THA.LOC104809580 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 2.3e-06 55.8 86 44.2
DCAR_021721 Daucus carota HOM05D002383 ORTHO05D002515 2.9e-06 55.5 89 40.4
THA.LOC104805371 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 2.9e-06 55.5 92 47.8
BcaC05g24959 Brassica carinata HOM05D002383 ORTHO05D002515 3.8e-06 55.1 89 42.7
FvH4_4g25460 Fragaria vesca HOM05D002383 ORTHO05D002515 3.8e-06 55.1 72 41.7
FAN12G0172 Fragaria x ananassa HOM05D002383 ORTHO05D002515 3.8e-06 55.1 72 41.7
PSO063G0306 Papaver somniferum HOM05D002383 ORTHO05D002515 3.8e-06 55.1 72 44.4
Phvul.004G010700 Phaseolus vulgaris HOM05D002383 ORTHO05D002515 5.0e-06 54.7 70 50.0
Nitab4.5_0003318g0140 Nicotiana tabacum HOM05D002383 ORTHO05D002515 6.6e-06 54.3 85 43.5
Aa31LG2G9800 Aethionema arabicum HOM05D002383 ORTHO05D002515 8.6e-06 53.9 88 40.9
Oeu018138.1 Olea europaea HOM05D002383 ORTHO05D002515 8.6e-06 53.9 71 40.8
Sopen02g016920 Solanum pennellii HOM05D002383 ORTHO05D002515 8.6e-06 53.9 73 43.8


User provided reference genes

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