Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012260g0010 Nicotiana tabacum HOM05D009044 ORTHO05D011261 2.4e-50 201.8 100 100.0
Sopen10g006300 Solanum pennellii HOM05D009044 ORTHO05D011261 5.6e-31 137.5 100 73.0
CAN.G1690.1 Capsicum annuum HOM05D009044 ORTHO05D011261 1.3e-30 136.3 93 78.5
CAN.G577.5 Capsicum annuum HOM05D009044 ORTHO05D011261 1.3e-30 136.3 93 78.5
CAN.G131.12 Capsicum annuum HOM05D009044 ORTHO05D011261 6.2e-30 134.0 93 76.3
CAN.G78.3 Capsicum annuum HOM05D009044 ORTHO05D011261 8.1e-30 133.7 93 77.4
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 1.3e-27 126.3 88 72.7
PGSC0003DMG402022238 Solanum tuberosum HOM05D009044 ORTHO05D011261 2.9e-27 125.2 81 79.0
Peaxi162Scf00622g00015 Petunia axillaris HOM05D009044 ORTHO05D011261 2.4e-21 105.5 75 76.0
Nitab4.5_0004471g0160 Nicotiana tabacum HOM05D009044 ORTHO05D011261 4.0e-21 104.8 57 87.7
Cc00_g01620 Coffea canephora HOM05D009044 ORTHO05D011261 5.8e-20 100.9 103 50.5
EL10Ac5g11444 Beta vulgaris HOM05D009044 ORTHO05D011261 7.1e-18 94.0 101 53.5
Lalb_Chr00c21g0405861 Lupinus albus HOM05D009044 ORTHO05D011261 2.7e-17 92.0 99 47.5
Lalb_Chr00c24g0406991 Lupinus albus HOM05D009044 ORTHO05D011261 2.7e-17 92.0 99 47.5
arahy.Tifrunner.gnm1.ann1.4L1UA2 Arachis hypogaea HOM05D009044 ORTHO05D011261 2.3e-16 89.0 104 48.1
arahy.Tifrunner.gnm1.ann1.2Y9TRI Arachis hypogaea HOM05D009044 ORTHO05D011261 6.7e-16 87.4 99 45.5
arahy.Tifrunner.gnm1.ann1.QUEV48 Arachis hypogaea HOM05D009044 ORTHO05D011261 1.9e-15 85.9 104 47.1
arahy.Tifrunner.gnm1.ann1.AMEH8M Arachis hypogaea HOM05D009044 ORTHO05D011261 2.1e-14 82.4 88 50.0
arahy.Tifrunner.gnm1.ann1.K6P20N Arachis hypogaea HOM05D009044 ORTHO05D011261 2.1e-14 82.4 88 50.0
arahy.Tifrunner.gnm1.ann1.TYE1TB Arachis hypogaea HOM05D009044 ORTHO05D011261 2.1e-14 82.4 88 50.0
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 2.8e-14 82.0 97 47.4
Migut.E01132 Erythranthe guttata HOM05D009044 ORTHO05D011261 2.4e-13 79.0 75 50.7
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 6.9e-13 77.4 64 59.4
CAN.G1321.8 Capsicum annuum HOM05D009044 ORTHO05D011261 1.2e-12 76.6 98 42.9
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.5e-12 76.3 90 50.0
arahy.Tifrunner.gnm1.ann1.ES8831 Arachis hypogaea HOM05D009044 ORTHO05D011261 2.0e-12 75.9 90 51.1
arahy.Tifrunner.gnm1.ann1.P3P6H5 Arachis hypogaea HOM05D009044 ORTHO05D002807 2.0e-12 75.9 90 51.1
CAN.G584.15 Capsicum annuum HOM05D009044 ORTHO05D011261 3.4e-12 75.1 98 41.8
CAN.G1082.4 Capsicum annuum HOM05D009044 ORTHO05D011261 1.7e-11 72.8 98 40.8
CAN.G950.5 Capsicum annuum HOM05D009044 ORTHO05D011261 3.8e-11 71.6 76 47.4
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 1.4e-10 69.7 64 45.3
Psat6g067520 Pisum sativum HOM05D009044 ORTHO05D011261 7.1e-10 67.4 83 45.8
TPR.G10887 Trifolium pratense HOM05D009044 ORTHO05D011261 9.3e-10 67.0 86 41.9
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.2e-09 66.6 77 48.1
Psat4g178280 Pisum sativum HOM05D009044 ORTHO05D011261 2.7e-09 65.5 67 49.3


User provided reference genes

Program Settings