Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003111g0070 Nicotiana tabacum HOM05D009491 ORTHO05D003796 1.1e-29 132.5 60 100.0
Nitab4.5_0012250g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-29 132.5 60 100.0
Nitab4.5_0024412g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.0e-28 128.3 60 96.7
Nitab4.5_0009087g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 8.3e-22 106.3 48 100.0
Nitab4.5_0009210g0020 Nicotiana tabacum HOM05D009491 ORTHO05D003796 8.3e-22 106.3 48 100.0
Nitab4.5_0022592g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 1.9e-21 105.1 48 97.9
Nitab4.5_0002608g0030 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.7e-20 101.3 48 95.8
Nitab4.5_0002160g0040 Nicotiana tabacum HOM05D009491 ORTHO05D003796 3.0e-19 97.8 48 91.7
Peaxi162Scf01007g00110 Petunia axillaris HOM05D009491 ORTHO05D003796 6.2e-17 90.1 59 71.2
Peaxi162Scf01007g00210 Petunia axillaris HOM05D009491 ORTHO05D003796 1.8e-16 88.6 59 69.5
CAN.G78.33 Capsicum annuum HOM05D008050 ORTHO05D003796 2.9e-14 81.3 48 72.9
Peaxi162Scf01007g00022 Petunia axillaris HOM05D009491 ORTHO05D003796 1.4e-13 79.0 48 72.9
Peaxi162Scf01007g00024 Petunia axillaris HOM05D009491 ORTHO05D003796 1.4e-13 79.0 48 72.9
Peaxi162Scf00009g00021 Petunia axillaris HOM05D009491 ORTHO05D003796 4.1e-13 77.4 48 70.8
Peaxi162Scf00397g00022 Petunia axillaris HOM05D008050 ORTHO05D003796 5.4e-13 77.0 48 70.8
Peaxi162Scf00106g00206 Petunia axillaris HOM05D008050 ORTHO05D003796 2.1e-12 75.1 48 70.8
Sopen07g027650 Solanum pennellii HOM05D009491 ORTHO05D003796 2.3e-11 71.6 48 62.5
CAN.G616.28 Capsicum annuum HOM05D009491 ORTHO05D003796 3.9e-11 70.9 47 59.6
CAN.G616.30 Capsicum annuum HOM05D009491 ORTHO05D003796 5.1e-11 70.5 48 56.2
CAN.G616.26 Capsicum annuum HOM05D009491 ORTHO05D003796 3.3e-10 67.8 47 55.3
PGSC0003DMG400000154 Solanum tuberosum HOM05D009491 ORTHO05D003796 4.7e-09 63.9 60 45.0
SGA_v2.0_scaffold18G08354 Striga asiatica HOM05D007636 ORTHO05D003796 6.8e-08 60.1 48 50.0
SGA_v2.0_scaffold18G08273 Striga asiatica HOM05D007636 ORTHO05D003796 1.5e-07 58.9 48 52.1
SGA_v2.0_scaffold18G08415 Striga asiatica HOM05D007636 ORTHO05D003796 1.5e-07 58.9 48 47.9
Peaxi162Scf00397g00112 Petunia axillaris HOM05D009491 ORTHO05D003796 2.0e-07 58.5 36 69.4
Peaxi162Scf37870g00003 Petunia axillaris HOM05D009491 ORTHO05D003796 2.0e-07 58.5 36 69.4
PGSC0003DMG400036166 Solanum tuberosum HOM05D009491 ORTHO05D003796 2.0e-07 58.5 59 45.8
Nitab4.5_0001286g0110 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.6e-07 58.2 49 49.0
Nitab4.5_0001670g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.6e-07 58.2 49 49.0
PGSC0003DMG400047167 Solanum tuberosum HOM05D008050 ORTHO05D003796 4.4e-07 57.4 50 50.0
Nitab4.5_0000499g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.8e-07 57.0 49 49.0
Nitab4.5_0001745g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.6e-07 56.6 47 48.9
Nitab4.5_0001670g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.9e-07 56.2 47 48.9
Nitab4.5_0003386g0050 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.9e-07 56.2 47 48.9
Nitab4.5_0005444g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.9e-07 56.2 47 48.9
PGSC0003DMG400040550 Solanum tuberosum HOM05D008050 ORTHO05D003796 9.9e-07 56.2 50 48.0
PGSC0003DMG400045663 Solanum tuberosum HOM05D008050 ORTHO05D003796 9.9e-07 56.2 50 48.0
Solyc03g062750.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 1.3e-06 55.8 51 47.1
Nitab4.5_0001745g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.9e-06 54.7 47 46.8
Nitab4.5_0002471g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.7e-06 54.3 47 48.9
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 3.7e-06 54.3 50 48.0
Nitab4.5_0002471g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.9e-06 53.9 47 46.8
Solyc03g062670.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 4.9e-06 53.9 50 48.0
Sopen03g014990 Solanum pennellii HOM05D008050 ORTHO05D003796 4.9e-06 53.9 50 48.0
Sopen03g015050 Solanum pennellii HOM05D008050 ORTHO05D003796 4.9e-06 53.9 51 47.1
Sopen03g033300 Solanum pennellii HOM05D008050 ORTHO05D003796 4.9e-06 53.9 50 46.0
Sopen03g033310 Solanum pennellii HOM05D008050 ORTHO05D003796 4.9e-06 53.9 50 46.0
PGSC0003DMG400039478 Solanum tuberosum HOM05D008050 ORTHO05D003796 4.9e-06 53.9 50 48.0
PGSC0003DMG400046943 Solanum tuberosum HOM05D008050 ORTHO05D003796 4.9e-06 53.9 50 48.0
Nitab4.5_0001745g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 8.4e-06 53.1 44 47.7


User provided reference genes

Program Settings