Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012234g0020 Nicotiana tabacum HOM05D008016 ORTHO05D010055 4.4e-80 301.2 149 100.0
Nitab4.5_0004137g0030 Nicotiana tabacum HOM05D008354 ORTHO05D010055 8.6e-44 180.6 149 67.8
Nitab4.5_0001727g0120 Nicotiana tabacum HOM05D008016 ORTHO05D010055 6.8e-33 144.4 146 58.2
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 9.2e-30 134.0 135 57.8
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 1.7e-28 129.8 136 58.8
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 8.1e-26 120.9 60 93.3
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 2.4e-25 119.4 133 54.1
Nitab4.5_0001249g0070 Nicotiana tabacum HOM05D008016 ORTHO05D010588 1.5e-24 116.7 63 84.1
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 2.9e-23 112.5 122 58.2
C02p28730 Brassica napus HOM05D008016 ORTHO05D010588 2.1e-21 106.3 51 94.1
Lsat_1_v5_gn_4_68181 Lactuca sativa HOM05D008016 ORTHO05D010055 3.5e-21 105.5 143 50.3
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 7.3e-19 97.8 106 55.7
CsaV3_UNG196490 Cucumis sativus L. HOM05D008016 ORTHO05D010588 2.1e-18 96.3 72 66.7
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 2.8e-18 95.9 124 50.0
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 3.6e-18 95.5 125 50.4
Nitab4.5_0004841g0090 Nicotiana tabacum HOM05D008354 ORTHO05D010055 3.6e-18 95.5 107 55.1
BNapus_Darmor_BZH_scaffold_69p00020 Brassica napus HOM05D008016 ORTHO05D010588 2.4e-17 92.8 47 89.4
CARHR282370 Cardamine hirsuta HOM05D008016 ORTHO05D010588 2.4e-17 92.8 47 89.4
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 3.1e-17 92.4 75 66.7
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
BolSC29t60625H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
BolSC44t60813H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 3.1e-17 92.4 46 89.1
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 4.0e-17 92.0 57 77.2
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 4.0e-17 92.0 125 48.0
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 5.3e-17 91.7 124 46.0
vmacro22417 Vaccinium macrocarpon HOM05D008354 ORTHO05D010055 6.9e-17 91.3 120 47.5
CAN.G100.35 Capsicum annuum HOM05D008016 ORTHO05D010588 9.0e-17 90.9 49 79.6
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 4.5e-16 88.6 44 88.6
DCAR_024575 Daucus carota HOM05D008354 ORTHO05D010055 1.4e-14 83.6 53 75.5
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.4e-14 83.6 120 47.5
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 4.2e-14 82.0 124 44.4
Lalb_Chr17g0346961 Lupinus albus HOM05D008016 ORTHO05D010588 1.2e-13 80.5 44 86.4
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.6e-13 80.1 40 90.0
Lsat_1_v5_gn_4_147840 Lactuca sativa HOM05D008016 ORTHO05D010588 1.6e-13 80.1 40 90.0
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.6e-13 80.1 40 90.0
QL93p0968_0000 Quercus lobata HOM05D008259 ORTHO05D010055 3.5e-13 79.0 74 63.5
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 3.9e-12 75.5 38 89.5
Nitab4.5_0007400g0100 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.1e-11 73.9 112 42.9
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 3.7e-10 68.9 36 88.9
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 1.1e-09 67.4 53 66.0
Thhalv10029308m.g Eutrema salsugineum HOM05D008354 ORTHO05D010055 1.8e-09 66.6 131 37.4
Migut.D01398 Erythranthe guttata HOM05D008354 ORTHO05D010055 4.0e-09 65.5 43 76.7
CAN.G1346.2 Capsicum annuum HOM05D001966 ORTHO05D010588 5.3e-09 65.1 33 90.9
Nitab4.5_0002404g0010 Nicotiana tabacum HOM05D008354 ORTHO05D010055 9.0e-09 64.3 37 86.5
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 9.0e-09 64.3 50 70.0
PGSC0003DMG400029000 Solanum tuberosum HOM05D008354 ORTHO05D010055 9.0e-09 64.3 37 86.5
PGSC0003DMG401008784 Solanum tuberosum HOM05D008354 ORTHO05D010055 9.0e-09 64.3 37 86.5
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 1.2e-08 63.9 63 57.1
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 1.5e-08 63.5 64 56.2
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.4e-08 62.4 67 55.2
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 3.4e-08 62.4 67 55.2
Lsat_1_v5_gn_2_20541 Lactuca sativa HOM05D008354 ORTHO05D010055 3.4e-08 62.4 36 86.1
Lsat_1_v5_gn_3_108780 Lactuca sativa HOM05D008354 ORTHO05D010055 3.4e-08 62.4 36 86.1
Lsat_1_v5_gn_3_110420 Lactuca sativa HOM05D008354 ORTHO05D010055 3.4e-08 62.4 36 86.1
Lsat_1_v5_gn_4_147820 Lactuca sativa HOM05D008354 ORTHO05D010055 3.4e-08 62.4 36 86.1
Lsat_1_v5_gn_5_181860 Lactuca sativa HOM05D008354 ORTHO05D010055 3.4e-08 62.4 36 86.1
Oeu040832.1 Olea europaea HOM05D008354 ORTHO05D010055 3.4e-08 62.4 36 86.1
CAN.G82.6 Capsicum annuum HOM05D000011 ORTHO05D000018 7.6e-08 61.2 40 72.5
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 7.6e-08 61.2 51 64.7
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 7.6e-08 61.2 51 64.7
arahy.Tifrunner.gnm1.ann1.CV8HTS Arachis hypogaea HOM05D008354 ORTHO05D010055 9.9e-08 60.8 44 72.7
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 9.9e-08 60.8 36 77.8
Aqoxy38s013 Aquilegia oxysepala HOM05D008354 ORTHO05D010055 1.3e-07 60.5 47 70.2
MELO3C000043.2 Cucumis melo HOM05D008354 ORTHO05D010055 1.3e-07 60.5 43 74.4
DCAR_031655 Daucus carota HOM05D008354 ORTHO05D010055 1.3e-07 60.5 34 85.3
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 1.7e-07 60.1 31 83.9
Peaxi162Scf00080g00519 Petunia axillaris HOM05D001966 ORTHO05D010055 2.2e-07 59.7 137 35.0
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 2.9e-07 59.3 29 89.7
arahy.Tifrunner.gnm1.ann1.V91BB6 Arachis hypogaea HOM05D008354 ORTHO05D010055 2.9e-07 59.3 36 77.8
arahy.Tifrunner.gnm1.ann1.VZYH4A Arachis hypogaea HOM05D008016 ORTHO05D010588 2.9e-07 59.3 29 89.7
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 2.9e-07 59.3 29 89.7
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 2.9e-07 59.3 29 89.7
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 3.8e-07 58.9 29 86.2
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 3.8e-07 58.9 102 39.2
Potri.013G092500 Populus trichocarpa HOM05D008354 ORTHO05D010055 6.4e-07 58.2 35 80.0
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 8.4e-07 57.8 63 52.4
CAN.G947.16 Capsicum annuum HOM05D001697 ORTHO05D001905 1.1e-06 57.4 33 87.9
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 1.9e-06 56.6 36 83.3
MELO3C028020.2 Cucumis melo HOM05D008354 ORTHO05D010055 1.9e-06 56.6 36 83.3
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 2.4e-06 56.2 55 56.4
Psat5g119000 Pisum sativum HOM05D009726 ORTHO05D010588 3.2e-06 55.8 53 50.9
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 3.2e-06 55.8 44 63.6
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 4.2e-06 55.5 36 69.4
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 4.2e-06 55.5 36 69.4
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 5.5e-06 55.1 48 58.3
arahy.Tifrunner.gnm1.ann1.R58SNE Arachis hypogaea HOM05D008016 ORTHO05D010055 7.1e-06 54.7 37 64.9
vmacro12501 Vaccinium macrocarpon HOM05D001824 ORTHO05D010055 9.3e-06 54.3 32 81.2


User provided reference genes

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