Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.3e-47 190.3 86 100.0
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.3e-38 160.6 86 88.4
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.5e-27 125.2 97 68.0
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 2.5e-27 125.2 94 69.1
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 4.2e-27 124.4 97 68.0
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 3.0e-25 118.2 94 68.1
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.0e-25 118.2 94 68.1
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.2e-25 117.5 87 67.8
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 5.7e-24 114.0 91 68.1
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 7.5e-24 113.6 90 68.9
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 9.7e-24 113.2 91 67.0
Nitab4.5_0001986g0120 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.3e-22 107.5 80 67.5
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.5e-21 104.8 94 61.7
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 1.1e-19 99.8 50 90.0
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.9e-19 99.0 85 65.9
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 4.7e-18 94.4 46 91.3
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 6.1e-18 94.0 100 53.0
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 2.0e-16 89.0 46 87.0
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 4.8e-15 84.3 83 56.6
Nitab4.5_0004137g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.1e-14 81.3 59 66.1
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 1.6e-13 79.3 83 53.0
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.6e-13 79.3 83 53.0
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 5.9e-13 77.4 88 51.1
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 7.7e-13 77.0 51 80.4
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 2.3e-12 75.5 69 62.3
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 2.9e-12 75.1 69 55.1
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 2.9e-12 75.1 69 55.1
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 3.8e-12 74.7 47 68.1
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 5.0e-12 74.3 91 51.6
Peaxi162Scf00080g00520 Petunia axillaris HOM05D008037 ORTHO05D004271 1.1e-11 73.2 59 66.1
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 1.1e-11 73.2 56 67.9
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.5e-11 72.8 33 90.9
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 2.5e-11 72.0 32 93.8
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 2.5e-11 72.0 33 93.9
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 5.5e-11 70.9 47 66.0
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 5.5e-11 70.9 47 66.0
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 5.5e-11 70.9 47 66.0
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 5.5e-11 70.9 33 90.9
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.2e-10 69.7 57 61.4
Manes.07G046200 Manihot esculenta HOM05D008037 ORTHO05D004271 1.6e-10 69.3 59 57.6
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 1.6e-10 69.3 32 93.8
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 2.1e-10 68.9 32 90.6
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 2.1e-10 68.9 32 90.6
EL10Ac6g13942 Beta vulgaris HOM05D008037 ORTHO05D004271 2.8e-10 68.6 34 94.1
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.7e-10 67.8 47 61.7
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 2.3e-09 65.5 63 54.0
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 2.3e-09 65.5 32 84.4
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 3.0e-09 65.1 30 90.0
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 3.0e-09 65.1 32 84.4
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.0e-09 64.7 32 84.4
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 4.0e-09 64.7 47 61.7
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.9e-09 63.5 31 87.1
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 1.2e-08 63.2 47 59.6
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.2e-08 63.2 47 61.7
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.2e-08 63.2 32 84.4
EL10Ac9g22450 Beta vulgaris HOM05D008037 ORTHO05D004271 2.0e-08 62.4 38 78.9
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.0e-08 62.4 31 87.1
Zm00001eb441600 Zea mays HOM05D008037 ORTHO05D004271 2.6e-08 62.0 37 78.4
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 3.4e-08 61.6 33 81.8
Phvul.009G203800 Phaseolus vulgaris HOM05D008037 ORTHO05D004271 3.4e-08 61.6 32 90.6
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 7.5e-08 60.5 30 83.3
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.3e-07 59.7 31 83.9
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 4.9e-07 57.8 48 58.3
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 1.4e-06 56.2 29 86.2
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 4.1e-06 54.7 30 80.0
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.4e-06 54.3 23 100.0
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 7.0e-06 53.9 30 80.0
Solyc03g150126.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 9.2e-06 53.5 107 39.3


User provided reference genes

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