Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.0e-72 274.6 137 100.0
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.8e-57 224.6 133 87.2
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-52 208.4 168 67.3
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-51 206.5 183 64.5
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-51 205.7 124 83.9
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-49 199.1 184 62.0
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-46 187.6 99 93.9
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.2e-45 185.3 97 92.8
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-44 182.6 98 89.8
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-44 182.2 110 82.7
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-43 179.9 98 89.8
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-43 179.5 98 90.8
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-43 179.1 97 89.7
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-43 178.3 99 87.9
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-43 177.9 99 88.9
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.8e-43 177.2 99 87.9
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-42 176.0 100 87.0
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.7e-42 174.5 99 83.8
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-40 169.5 99 83.8
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.7e-39 164.1 97 84.5
Nitab4.5_0017446g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-37 157.5 91 86.8
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-35 153.7 181 52.5
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-35 151.0 191 49.2
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-34 149.8 99 76.8
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-33 144.4 99 75.8
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-32 143.3 99 74.7
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-27 126.7 70 85.7
Nitab4.5_0000584g0070 Nicotiana tabacum HOM05D006864 ORTHO05D000013 2.0e-26 122.9 64 93.8
Nitab4.5_0000021g0990 Nicotiana tabacum HOM05D006864 ORTHO05D282769 2.5e-21 105.9 67 80.6
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-19 99.4 99 55.6
Nitab4.5_0007137g0050 Nicotiana tabacum HOM05D006864 ORTHO05D284446 8.8e-19 97.4 101 53.5
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-18 96.7 55 78.2
Nitab4.5_0000377g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-16 90.1 47 93.6
Nitab4.5_0002870g0050 Nicotiana tabacum HOM05D006864 ORTHO05D286406 7.0e-16 87.8 65 67.7
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.0e-16 87.8 81 49.4
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 3.5e-15 85.5 99 42.4
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-14 84.0 99 41.4
Nitab4.5_0000924g0030 Nicotiana tabacum HOM05D006864 ORTHO05D285280 1.9e-13 79.7 43 88.4
Nitab4.5_0002695g0020 Nicotiana tabacum HOM05D006864 ORTHO05D285932 2.5e-13 79.3 43 86.0
Nitab4.5_0017446g0020 Nicotiana tabacum HOM05D006864 ORTHO05D282943 3.0e-11 72.4 40 90.0
Nitab4.5_0006001g0060 Nicotiana tabacum HOM05D006864 ORTHO05D286730 3.4e-10 68.9 40 87.5
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 4.4e-10 68.6 100 35.0
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.7e-10 68.2 87 42.5
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.7e-10 68.2 80 41.2
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.8e-10 67.4 83 41.0
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-09 67.0 81 39.5
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 1.3e-09 67.0 131 31.3
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-09 66.6 86 40.7
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 1.7e-09 66.6 100 35.0
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-08 63.2 97 39.2
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-08 63.2 72 41.7
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-08 62.4 85 42.4
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-08 62.4 72 44.4
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-08 62.4 84 40.5
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-08 62.0 72 43.1
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-08 62.0 87 41.4
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-08 62.0 74 43.2
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.4e-08 61.6 112 33.0
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.1e-08 60.8 72 40.3
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-07 60.1 69 37.7
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-07 59.7 56 51.8
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-07 59.3 96 40.6
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 2.7e-07 59.3 71 36.6
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.9 87 34.5
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.9 87 34.5
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.5e-07 58.9 70 41.4
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-07 58.9 79 38.0
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.7e-07 57.8 70 40.0
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.7e-07 57.8 82 39.0
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 1.0e-06 57.4 71 38.0
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.0e-06 57.4 70 41.4
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-06 57.4 71 39.4
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-06 57.4 70 40.0
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 1.0e-06 57.4 118 34.7
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 1.0e-06 57.4 67 40.3
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 1.0e-06 57.4 70 41.4
Nitab4.5_0001329g0170 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-06 57.0 64 43.8
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-06 57.0 71 39.4
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 1.3e-06 57.0 82 34.1
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 1.7e-06 56.6 68 36.8
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 1.7e-06 56.6 68 36.8
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 1.7e-06 56.6 68 36.8
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 1.7e-06 56.6 68 36.8
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.7e-06 56.6 68 36.8
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.7e-06 56.6 68 36.8
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-06 56.6 70 40.0
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-06 56.2 70 41.4
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.8e-06 55.5 81 38.3
Nitab4.5_0004510g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-06 55.5 70 42.9
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.8e-06 55.5 70 40.0
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 3.8e-06 55.5 82 31.7
Peaxi162Scf01018g00211 Petunia axillaris HOM05D000533 ORTHO05D001069 3.8e-06 55.5 86 34.9
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.0e-06 55.1 70 37.1
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.0e-06 55.1 64 43.8
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.0e-06 55.1 85 35.3
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.0e-06 55.1 70 41.4
Nitab4.5_0010143g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-06 55.1 96 36.5
Nitab4.5_0002951g0110 Nicotiana tabacum HOM05D006864 ORTHO05D284982 6.6e-06 54.7 25 96.0
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 6.6e-06 54.7 82 31.7
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.6e-06 54.3 70 37.1
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.6e-06 54.3 136 25.7
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 8.6e-06 54.3 82 30.5


User provided reference genes

Program Settings