Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.5e-48 195.7 143 100.0
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.3e-41 172.6 138 96.4
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 3.6e-39 165.2 138 92.8
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 3.6e-39 165.2 138 92.8
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.4e-38 163.3 138 92.0
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 5.2e-38 161.4 138 91.3
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.2e-37 160.2 138 91.3
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 1.2e-37 160.2 138 91.3
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 1.5e-37 159.8 138 90.6
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 1.7e-36 156.4 138 84.8
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 2.2e-36 156.0 140 77.1
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 6.3e-36 154.5 138 84.8
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 1.8e-35 152.9 138 79.0
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 2.4e-35 152.5 140 79.3
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 2.4e-35 152.5 140 82.9
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 3.1e-35 152.1 140 85.0
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 3.1e-35 152.1 138 84.8
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 5.4e-35 151.4 140 82.1
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 5.4e-35 151.4 140 84.3
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 7.0e-35 151.0 138 81.9
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 1.2e-34 150.2 138 84.8
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 1.6e-34 149.8 140 82.9
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 1.6e-34 149.8 140 80.0
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 1.6e-34 149.8 140 84.3
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 2.0e-34 149.4 140 82.1
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 2.7e-34 149.1 140 80.7
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 3.5e-34 148.7 138 81.9
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 4.5e-34 148.3 138 84.8
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 5.9e-34 147.9 140 79.3
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 5.9e-34 147.9 141 55.3
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 7.8e-34 147.5 138 79.0
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 7.8e-34 147.5 138 82.6
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 7.8e-34 147.5 140 82.9
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 1.0e-33 147.1 138 82.6
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 1.3e-33 146.7 140 80.7
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.3e-33 146.7 138 55.8
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 1.3e-33 146.7 140 80.0
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 1.7e-33 146.4 138 78.3
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 1.7e-33 146.4 138 81.2
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 2.3e-33 146.0 140 84.3
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 2.3e-33 146.0 138 78.3
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 2.9e-33 145.6 138 81.9
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 3.8e-33 145.2 140 82.1
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 3.8e-33 145.2 140 82.1
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 3.8e-33 145.2 140 82.1
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 3.8e-33 145.2 138 83.3
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 5.0e-33 144.8 138 79.0
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 5.0e-33 144.8 140 82.9
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 5.0e-33 144.8 137 84.7
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 6.6e-33 144.4 138 81.9
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 6.6e-33 144.4 142 77.5
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 1.9e-32 142.9 138 82.6
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 3.3e-32 142.1 140 81.4
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 4.3e-32 141.7 140 77.1
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 4.3e-32 141.7 140 79.3
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 5.6e-32 141.4 142 76.8
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 7.3e-32 141.0 138 81.2
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 7.3e-32 141.0 138 80.4
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 1.2e-31 140.2 138 81.9
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 1.6e-31 139.8 139 68.3
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 1.6e-31 139.8 144 71.5
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 2.1e-31 139.4 140 79.3
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 2.8e-31 139.0 136 77.2
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 2.8e-31 139.0 138 79.7
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 1.4e-30 136.7 142 77.5
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 1.4e-30 136.7 138 79.0
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 1.4e-30 136.7 138 79.0
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 1.8e-30 136.3 142 78.2
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 6.8e-30 134.4 142 78.2
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 6.8e-30 134.4 161 46.6
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 2.6e-29 132.5 138 79.0
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 3.4e-29 132.1 123 76.4
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 4.4e-29 131.7 142 77.5
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 4.4e-29 131.7 142 77.5
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 4.4e-29 131.7 155 47.7
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 5.8e-29 131.3 138 79.0
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 7.5e-29 131.0 138 79.0
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.3e-28 130.2 138 78.3
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 2.2e-28 129.4 138 79.0
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 2.9e-28 129.0 142 77.5
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 4.9e-28 128.3 142 76.1
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 1.8e-27 126.3 133 53.4
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 3.2e-27 125.6 141 75.9
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 7.0e-27 124.4 127 81.1
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 1.2e-26 123.6 142 48.6
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 2.0e-26 122.9 140 49.3
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 3.5e-26 122.1 138 77.5
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 4.6e-26 121.7 142 47.9
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 4.6e-26 121.7 142 47.9
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 1.0e-25 120.6 137 45.3
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 1.3e-25 120.2 138 74.6
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 1.3e-25 120.2 139 46.8
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 3.9e-25 118.6 213 37.6
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 5.0e-25 118.2 139 46.0
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 6.6e-25 117.9 137 73.0
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 6.6e-25 117.9 113 56.6
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 8.6e-25 117.5 138 73.9
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 8.6e-25 117.5 143 46.2
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 8.0e-23 110.9 142 45.8
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 6.8e-22 107.8 119 49.6
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 1.5e-21 106.7 118 48.3
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 3.4e-21 105.5 140 70.7
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 7.5e-21 104.4 116 47.4
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 1.3e-20 103.6 113 82.3
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.9e-20 102.4 114 50.0
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 8.3e-20 100.9 140 69.3
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 1.9e-19 99.8 138 40.6
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 4.6e-18 95.1 128 43.0
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 1.0e-17 94.0 140 62.9
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.3e-17 93.6 48 95.8
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 2.3e-17 92.8 54 75.9
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 1.9e-16 89.7 52 78.8
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 5.6e-16 88.2 52 75.0
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 5.6e-16 88.2 52 75.0
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 5.6e-16 88.2 52 75.0
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 1.1e-14 84.0 52 73.1
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 1.8e-14 83.2 114 37.7
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 3.7e-12 75.5 54 63.0
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 7.8e-10 67.8 98 40.8
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.9e-08 63.2 47 61.7
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 3.3e-08 62.4 104 36.5


User provided reference genes

Program Settings