Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 2.0e-272 941.8 466 100.0
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 1.1e-265 919.5 466 97.0
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 2.8e-250 868.2 465 92.0
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 4.8e-250 867.5 465 92.0
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 6.2e-250 867.1 464 92.2
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 1.2e-248 862.8 465 91.6
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 7.1e-246 853.6 466 90.8
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 2.4e-217 758.8 464 78.9
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 1.2e-216 756.5 464 78.7
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 1.5e-211 739.6 464 76.7
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 4.4e-211 738.0 468 75.4
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 2.0e-208 729.2 464 75.2
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 3.8e-207 724.9 464 74.4
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 5.0e-207 724.5 470 75.5
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 8.5e-207 723.8 460 76.7
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 1.4e-204 716.5 464 75.9
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 4.0e-204 714.9 462 74.9
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 5.2e-204 714.5 465 74.0
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 6.8e-204 714.1 461 76.1
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 4.4e-203 711.4 462 74.5
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 2.2e-202 709.1 464 73.1
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 4.8e-202 708.0 471 74.7
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 6.3e-202 707.6 465 74.6
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 1.1e-201 706.8 462 75.5
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.4e-201 706.4 464 72.0
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 1.8e-201 706.1 471 73.0
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 1.8e-201 706.1 465 74.0
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 4.1e-201 704.9 465 74.2
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 7.0e-201 704.1 464 71.8
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 1.2e-200 703.4 467 72.8
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 1.2e-200 703.4 469 73.3
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 1.6e-200 703.0 461 73.5
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 5.9e-200 701.0 467 74.7
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 1.0e-199 700.3 475 71.8
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.0e-199 700.3 464 71.8
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 1.7e-199 699.5 467 74.3
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.7e-199 699.5 466 74.0
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 2.3e-199 699.1 464 73.9
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 2.9e-199 698.7 465 74.8
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.8e-199 698.4 464 71.3
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 6.6e-199 697.6 451 74.5
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 3.3e-198 695.3 462 72.7
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 1.6e-197 693.0 467 72.2
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 1.4e-196 689.9 464 73.5
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 1.4e-196 689.9 455 73.0
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 1.8e-196 689.5 467 71.1
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 4.0e-196 688.3 464 71.8
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 5.2e-196 688.0 468 71.4
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 1.2e-195 686.8 461 71.6
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 1.2e-195 686.8 455 72.1
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 2.0e-195 686.0 464 70.5
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 3.4e-195 685.3 467 70.7
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 4.4e-195 684.9 467 72.2
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.3e-194 683.3 464 70.9
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 1.3e-194 683.3 416 76.4
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 1.7e-194 682.9 474 69.8
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 2.2e-194 682.6 464 71.3
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 3.7e-194 681.8 466 71.2
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 4.9e-194 681.4 394 82.5
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 6.3e-194 681.0 468 72.2
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 4.1e-193 678.3 485 70.3
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 9.2e-193 677.2 455 72.1
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 2.7e-192 675.6 465 70.8
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 3.5e-192 675.2 461 70.5
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 5.9e-192 674.5 444 73.0
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 2.3e-191 672.5 464 71.3
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 1.1e-190 670.2 461 73.1
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 4.3e-190 668.3 460 73.3
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 5.6e-190 667.9 465 69.2
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 7.3e-190 667.5 459 72.1
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 2.8e-189 665.6 466 72.5
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 3.6e-189 665.2 465 71.4
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 2.0e-187 659.4 465 71.4
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 4.9e-186 654.8 465 68.4
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 6.4e-186 654.4 509 64.8
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 8.3e-186 654.1 465 69.5
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 4.1e-185 651.7 456 70.0
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 5.4e-185 651.4 465 68.2
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 1.3e-183 646.7 468 69.2
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 1.3e-183 646.7 465 69.5
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 1.3e-183 646.7 465 69.5
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 3.9e-183 645.2 383 79.6
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.1e-182 643.7 468 69.0
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 1.2e-181 640.2 487 64.9
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 1.4e-177 626.7 408 74.3
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.0e-175 619.0 405 72.6
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.8e-164 583.2 388 72.9
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 2.2e-162 576.2 410 65.6
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 1.1e-161 573.9 463 60.7
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 1.8e-156 556.6 410 64.1
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.1e-153 547.4 465 61.5
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 5.6e-142 508.4 322 76.7
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 5.5e-137 491.9 350 69.1
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 1.4e-132 477.2 455 56.3
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 2.5e-121 439.9 412 52.2
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.5e-118 429.9 400 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 4.3e-118 429.1 400 54.2
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.7e-117 427.2 413 50.6
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 1.3e-109 401.0 401 49.4
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 1.5e-102 377.5 417 46.8
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 7.7e-83 312.0 200 72.5
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 4.9e-69 266.2 187 69.5
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 5.0e-66 256.1 195 63.1
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 5.0e-66 256.1 195 63.1
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 5.6e-57 226.1 144 68.8
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.0e-26 125.6 80 78.8
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 2.1e-19 101.3 61 73.8


User provided reference genes

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