Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012140g0020 Nicotiana tabacum HOM05D009881 ORTHO05D011059 3.8e-197 691.4 378 100.0
Nitab4.5_0000500g0180 Nicotiana tabacum HOM05D009881 ORTHO05D011059 2.1e-163 579.3 382 86.1
PGSC0003DMG400026223 Solanum tuberosum HOM05D009881 ORTHO05D011059 1.3e-96 357.5 399 60.7
Sopen08g026460 Solanum pennellii HOM05D009881 ORTHO05D011059 3.0e-85 319.7 387 53.0
Solyc08g077950.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 6.7e-85 318.5 406 51.2
Sopen12g034020 Solanum pennellii HOM05D009881 ORTHO05D011059 1.4e-66 257.7 424 43.4
Solyc12g099350.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 1.6e-62 244.2 427 40.7
Peaxi162Scf00544g00016 Petunia axillaris HOM05D009881 ORTHO05D011059 2.3e-53 213.8 378 46.0
Nitab4.5_0003456g0060 Nicotiana tabacum HOM05D009881 ORTHO05D011059 1.6e-41 174.5 370 38.1
PGSC0003DMG400026589 Solanum tuberosum HOM05D009881 ORTHO05D011059 3.1e-37 160.2 394 35.5
Dinv21695 Davidia involucrata HOM05D012601 ORTHO05D011059 6.2e-30 136.0 394 32.0
Nitab4.5_0000506g0130 Nicotiana tabacum HOM05D009881 ORTHO05D011059 3.7e-27 126.7 321 35.5
CSS0003836 Camellia sinensis var. sinensis HOM05D009881 ORTHO05D011059 1.5e-23 114.8 397 30.7
Oeu007318.1 Olea europaea HOM05D009881 ORTHO05D011059 2.4e-18 97.4 417 29.5
Actinidia31496 Actinidia chinensis HOM05D012601 ORTHO05D011059 1.1e-13 82.0 399 26.1
Cc08_g11440 Coffea canephora HOM05D009881 ORTHO05D011059 8.4e-11 72.4 511 23.7
SGA_v2.0_scaffold69G23156 Striga asiatica HOM05D001352 ORTHO05D011059 1.1e-10 72.0 399 25.3
SGA_v2.0_scaffold69G23154 Striga asiatica HOM05D001103 ORTHO05D000954 9.3e-10 68.9 83 39.8
TAR375G0689 Trochodendron aralioides HOM05D012601 ORTHO05D011059 3.5e-09 67.0 78 46.2
SalBow6G1342 Salvia bowleyana HOM05D009881 ORTHO05D011059 1.3e-08 65.1 419 26.3
Rhsim07G0119100 Rhododendron simsii HOM05D012601 ORTHO05D011059 3.9e-08 63.5 382 28.0
Dinv28869 Davidia involucrata HOM05D012601 ORTHO05D011059 1.9e-07 61.2 386 25.9
DCAR_008332 Daucus carota HOM05D009881 ORTHO05D011059 7.3e-07 59.3 99 38.4
SGA_v2.0_scaffold104G30220 Striga asiatica HOM05D009881 ORTHO05D011059 1.3e-06 58.5 382 24.9
Migut.I01098 Erythranthe guttata HOM05D009881 ORTHO05D011059 4.8e-06 56.6 88 40.9


User provided reference genes

Program Settings